Ecosyste.ms: Repos
An open API service providing repository metadata for many open source software ecosystems.
GitHub topics: protein-alignment
westlake-repl/ProTrek
ProTrek: Navigating the Protein Universe through Tri-Modal Contrastive Learning
Language: Python - Size: 933 KB - Last synced: 2 days ago - Pushed: 2 days ago - Stars: 16 - Forks: 2
gauravcodepro/coding-stitcher-pangenome
a coding sticher for genome annotations, which stitch all your coding regions coming out of the exon alignments and will produce the gene visualization for the pangenome
Language: Python - Size: 28.3 KB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 0 - Forks: 0
github4touchdouble/bench-sequence-alignments
Benchmark the performance of sequence alignment workflows
Language: Ruby - Size: 16.6 KB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 0 - Forks: 0
ToniWestbrook/paladin
Protein Alignment and Detection Interface
Language: C - Size: 17 MB - Last synced: 2 months ago - Pushed: 2 months ago - Stars: 55 - Forks: 7
TaeWooJung/MutFold
MutFold | Human breast cancer associated mutant protein structure prediction and alignment application
Language: Jupyter Notebook - Size: 31.8 MB - Last synced: 6 months ago - Pushed: 6 months ago - Stars: 0 - Forks: 0
haddad-github/ProteinAlignment-GapPenaltyTraceback-BLOSUM62Matrix
Protein alignment using gap penalty traceback with the Blosum62 Matrix
Language: Python - Size: 7.81 KB - Last synced: 8 months ago - Pushed: over 3 years ago - Stars: 2 - Forks: 0
NolanTrem/SARS-CoV-Protein-Finding
FASTA Alignment search for BsaI and BsmBI restriction sites in the ORF6 protein to verify assertions made by Bruttel, et. al. in "Endonuclease fingerprint indicates a synthetic origin of SARS-CoV-2."
Language: MATLAB - Size: 46.9 KB - Last synced: over 1 year ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0
ToniWestbrook/paladin-plugins
Pipeline plugins for PALADIN, providing HPC support, abundance (taxonomy, go terms), customized reports, etc
Language: Python - Size: 77.1 KB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 3 - Forks: 1
gabrielctn/flexible_structural_alignment
Flexible protein alignment using Protein Units
Language: Python - Size: 2.33 MB - Last synced: over 1 year ago - Pushed: over 5 years ago - Stars: 1 - Forks: 0
beowulfey/linnaeo
For viewing, analyzing, and generating figures of protein sequence alignments.
Language: C++ - Size: 1.24 MB - Last synced: over 1 year ago - Pushed: over 2 years ago - Stars: 0 - Forks: 1
