GitHub topics: protein-prediction
sacdallago/bio_embeddings
Get protein embeddings from protein sequences
Language: HTML - Size: 68.3 MB - Last synced at: 4 days ago - Pushed at: about 2 years ago - Stars: 489 - Forks: 70
LucaAngioloni/ProteinSecondaryStructure-CNN
Protein Secondary Structure predictor using Convolutional Neural Networks
Language: Python - Size: 44 MB - Last synced at: 23 days ago - Pushed at: almost 2 years ago - Stars: 113 - Forks: 31
breimanntools/aaanalysis
Python framework for interpretable protein prediction
Language: Jupyter Notebook - Size: 485 MB - Last synced at: 28 days ago - Pushed at: about 2 months ago - Stars: 55 - Forks: 2
BernhoferM/TMbed
Transmembrane proteins predicted through Language Model embeddings
Language: Python - Size: 14.8 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 32 - Forks: 4
jahnl/binding_in_disorder
Prediction of Binding Residues in Disordered Regions Based on Protein Embeddings; TUM Master Praktikum Bioinformatics 2022 (Project #3) and Master's Thesis
Language: Python - Size: 3.26 GB - Last synced at: 8 days ago - Pushed at: 9 days ago - Stars: 7 - Forks: 2
justin-tpb/Vampyrellida-genomics
Scripts and data regarding Vampyrellida genomics.
Language: Shell - Size: 42 KB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 0 - Forks: 0
mainpyp/cls-protein-prediction
Code and results for the practical exercises of the course "Protein Prediction 2" in Winter 21/22 at TUM Authors: Adrian Henkel, Finn Gaida, Lis Arend, Sebastian Dötsch, Shlomo Libo Feigin
Language: Jupyter Notebook - Size: 28.6 MB - Last synced at: about 1 year ago - Pushed at: about 3 years ago - Stars: 4 - Forks: 0
mathieubolteau/GLOG-Project
Repository for the software engineering project during the second year of the Master of Bioinformatics at the University of Bordeaux.
Language: JavaScript - Size: 4.3 MB - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0
kiwi2kiwi/Phosphorylation_prediction
Predicting phosphorylation sites from sequence and structure via a GNN
Language: Python - Size: 45.5 MB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0
zhouzilu/cTPnet
cTPnet Package
Language: Python - Size: 145 MB - Last synced at: over 1 year ago - Pushed at: almost 3 years ago - Stars: 23 - Forks: 4
Rostlab/bio_embeddings
Repository containing bio_embeddings resources
Size: 1000 Bytes - Last synced at: almost 2 years ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0
JasonJiangs/HNOX_Pred
HNOXPred: a web tool for the prediction of gas sensing H-NOX proteins from amino acid sequence
Language: JavaScript - Size: 816 KB - Last synced at: 15 days ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0
grace-raper/markov-protein-prediction
Utilizes Markov Models to predict protein coding genes
Language: MATLAB - Size: 1.49 MB - Last synced at: about 2 years ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0
Rostlab/TMbed
Transmembrane proteins predicted through Language Model embeddings
Size: 0 Bytes - Last synced at: over 1 year ago - Pushed at: almost 3 years ago - Stars: 0 - Forks: 0