shenwei356/LexicMap

LexicMap: efficient sequence alignment against millions of prokaryotic genomes

Language: Go - Size: 43.8 MB - Last synced at: 16 days ago - Pushed at: 16 days ago - Stars: 140 - Forks: 4

medvir/VirMet

Set of tools for viral metagenomics.

Language: Python - Size: 1.19 MB - Last synced at: 2 days ago - Pushed at: 2 days ago - Stars: 14 - Forks: 5

jordanlab/stringMLST

Fast k-mer based tool for multi locus sequence typing (MLST)

Language: Python - Size: 5.33 MB - Last synced at: 18 days ago - Pushed at: over 4 years ago - Stars: 44 - Forks: 7

msysbio/bacterial_growth

a database and an interface for bacterial growth data

Language: Python - Size: 10.9 MB - Last synced at: 4 months ago - Pushed at: 10 months ago - Stars: 1 - Forks: 3

TIBHannover/BacDiveR

Inofficial R client for the DSMZ's Bacterial Diversity Metadatabase (former contact: @katrinleinweber). https://api.bacdive.dsmz.de/client_examples seems to be the official alternatives.

Language: R - Size: 3.22 MB - Last synced at: 12 months ago - Pushed at: almost 3 years ago - Stars: 11 - Forks: 12

NotTheStallion/Computer-vision-in-the-service-of-bacteriology

Computer vision in the service of bacteriology refers to the use of computer algorithms and technology to analyze and interpret images of bacteria for the purpose of identifying and characterizing different types of bacteria.

Language: Jupyter Notebook - Size: 7.77 MB - Last synced at: about 2 months ago - Pushed at: about 1 year ago - Stars: 2 - Forks: 0

SimranBansal98/UniqueRepeats_BacterialProteome

Language: Python - Size: 1.21 GB - Last synced at: about 2 years ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 1

glickmac/GRAB

Retrieve and create a custom BLAST database by taxonomic search

Language: Python - Size: 48.5 MB - Last synced at: about 2 years ago - Pushed at: about 7 years ago - Stars: 0 - Forks: 0