An open API service providing repository metadata for many open source software ecosystems.

GitHub topics: computational-neuroscience

arnaumarin/Hopfield-DNN-Artifact-BCI

NeurIPS AMHN 2023: Neural recordings artifacts preprocessing model and pipeline. Hopfield Deep Neural Networks for Artifact preprocessing in Brain State Decoding

Language: Python - Size: 12.8 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 6 - Forks: 1

mne-tools/mne-cpp

MNE-CPP: A Framework for Electrophysiology

Language: C++ - Size: 349 MB - Last synced at: 5 months ago - Pushed at: 12 months ago - Stars: 154 - Forks: 141

sanjayankur31/nml-ui

[WIP] Prototype desktop application for working with NeuroML models

Language: Python - Size: 7.81 KB - Last synced at: 6 days ago - Pushed at: 6 months ago - Stars: 0 - Forks: 0

emaballarin/foveatorch

๐Ÿ‘€๐Ÿ”ฅ Differentiable foveated vision for Deep Learning methods

Language: Python - Size: 1.51 MB - Last synced at: 9 days ago - Pushed at: 6 months ago - Stars: 5 - Forks: 0

paolaboscagin/Computational-Neuroscience

University of Washington's Computational Neuroscience Course

Size: 7.06 MB - Last synced at: 15 days ago - Pushed at: 6 months ago - Stars: 0 - Forks: 0

royschz/Oscillation-Amplitude-and-Cortical-Synchronization-in-Neuronal-Networks

Synchronization in Neuronal Oscillators: The Role of Oscillation Amplitude in Cortical Synchronization.

Language: Python - Size: 828 KB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 0 - Forks: 0

raminmh/Worm-Blogging

Here, I include my thoughts about how does the brain of the worm give rise to remarkable behavioral plasticities

Size: 6.84 KB - Last synced at: 17 days ago - Pushed at: over 7 years ago - Stars: 4 - Forks: 1

alexandershaw4/aoptim

a gradient-based optimisation routine for highly parameterised non-linear dynamical models

Language: MATLAB - Size: 7 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 4 - Forks: 0

ago109/contrastive-signal-dependent-plasticity

CSDP: Biological Credit Assignment for Spiking Neural Circuits

Language: Python - Size: 19.2 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 4 - Forks: 0

RatInABox-Lab/RatInABox

A python package for simulating motion in continuous environments and spatial cell types (e.g. place cell).

Language: Python - Size: 708 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 189 - Forks: 31

MohaZamani/SNN-Visual-Cortex-Simulation

Simulates image processing in the visual cortex using Gabor and DoG filters in spiking neural networks.

Language: Jupyter Notebook - Size: 18 MB - Last synced at: about 2 months ago - Pushed at: 6 months ago - Stars: 0 - Forks: 0

MohaZamani/Neural-Learning-and-Coding

Explores neural coding schemes and learning mechanisms in neuroscience using STDP and RSTDP models for synaptic plasticity.

Language: Jupyter Notebook - Size: 12.3 MB - Last synced at: about 2 months ago - Pushed at: 6 months ago - Stars: 0 - Forks: 0

MohaZamani/Neuron-Models

Implementation and Simulations of LIF, ELIF, and AELIF neuron models with various input currents

Language: Jupyter Notebook - Size: 11.2 MB - Last synced at: about 2 months ago - Pushed at: 6 months ago - Stars: 0 - Forks: 0

MohaZamani/Neuronal-Populations-Simulation

Simulating Synaptic Dynamics and Decision-Making in Neuronal Populations

Language: Jupyter Notebook - Size: 15.1 MB - Last synced at: about 2 months ago - Pushed at: 6 months ago - Stars: 0 - Forks: 0

CompCogNeuro/book

Computational Cognitive Neuroscience textbook

Language: TeX - Size: 99.6 MB - Last synced at: 6 months ago - Pushed at: 7 months ago - Stars: 298 - Forks: 31

btel/python-in-neuroscience-tutorials

Collection of tutorials about methods of computational neuroscience using Python

Language: Jupyter Notebook - Size: 2.53 MB - Last synced at: 5 months ago - Pushed at: about 8 years ago - Stars: 73 - Forks: 24

TomBugnon/deNEST

deNEST: A declarative interface for specifying networks and simulations in NEST

Language: Python - Size: 4.87 MB - Last synced at: 9 days ago - Pushed at: 7 months ago - Stars: 5 - Forks: 0

pclus/neuromorphology

Computational neural network model incorporating neuromorphological alterations present in animal models of Down Syndrome. Main publication: https://doi.org/10.1371/journal.pcbi.1012259

Language: C - Size: 376 MB - Last synced at: 7 months ago - Pushed at: 7 months ago - Stars: 0 - Forks: 0

FabrizioMusacchio/NEST_tutorials

This is a collection of tutorials showing how to use the NEST Simulator.

Language: Python - Size: 233 KB - Last synced at: about 2 months ago - Pushed at: 7 months ago - Stars: 1 - Forks: 0

Mehrab-Kalantari/Computational-Neuroscience

Implementation of computational neuroscience models, including single neurons, neural populations, networks, and learning processes

Language: Jupyter Notebook - Size: 4.41 MB - Last synced at: about 2 months ago - Pushed at: 8 months ago - Stars: 0 - Forks: 0

computational-neuroscience/Computational-Neuroscience-UW

Python scripts that supplement the Coursera Computational Neuroscience course by the University of Washington

Language: Jupyter Notebook - Size: 2.31 MB - Last synced at: 5 months ago - Pushed at: almost 8 years ago - Stars: 133 - Forks: 60

colinator/spikeflow

Python library for easy creation and running of spiking neural networks in tensorflow.

Language: Jupyter Notebook - Size: 4.6 MB - Last synced at: 5 months ago - Pushed at: about 6 years ago - Stars: 31 - Forks: 6

George614/neural_active_inference

Official implementation of paper "A neural active inference model of perceptual-motor learning" published on Computational Neuroscience in 2023.

Language: Python - Size: 642 KB - Last synced at: 8 months ago - Pushed at: 8 months ago - Stars: 5 - Forks: 0

peterajhgraham/BNN_Biological_Network_Inference

This repository contains a Bayesian Neural Network (BNN) based analysis tool for biological network inference that can be used with various datasets. It is programmed in Python along with the torch, torchbnn, pandas, scikit-learn, and matplotlib libraries.

Language: Python - Size: 35.2 KB - Last synced at: 12 days ago - Pushed at: 8 months ago - Stars: 0 - Forks: 0

NeuroML/org.neuroml.import

Import other formats into LEMS & combine with NeuroML models

Language: Java - Size: 437 KB - Last synced at: 24 days ago - Pushed at: 2 months ago - Stars: 1 - Forks: 2

BMHLab/BrainEigenmodes_legacy

Code supporting 'Geometric constraints on human brain function'

Language: MATLAB - Size: 172 MB - Last synced at: 5 months ago - Pushed at: almost 2 years ago - Stars: 8 - Forks: 2

sanjayankur31/NeuroML-widgets

Jupyter widgets for use with NeuroML

Language: Python - Size: 41 KB - Last synced at: 6 days ago - Pushed at: 8 months ago - Stars: 0 - Forks: 0

BlueBrain/SimulationTutorials

Public tutorials around electrophysiological simulations

Language: Jupyter Notebook - Size: 43.6 MB - Last synced at: 20 days ago - Pushed at: over 2 years ago - Stars: 26 - Forks: 19

arashsm79/path-integration-bump-attractor

Path Integration using bump attractors as head direction cells

Language: Jupyter Notebook - Size: 7.27 MB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 0 - Forks: 0

mackelab/gp-maps-python

Gaussian process method for inferring cortical maps (Python version), code by Dominik Straub @dominikstrb

Language: Python - Size: 25.2 MB - Last synced at: 17 days ago - Pushed at: 10 months ago - Stars: 2 - Forks: 2

lacerbi/neurobench

Benchmark of derivative-free optimization algorithms applied to models in cognitive and neural science.

Language: MATLAB - Size: 3.57 MB - Last synced at: about 12 hours ago - Pushed at: about 6 years ago - Stars: 5 - Forks: 1

koriavinash1/nfm

neural field models

Language: Python - Size: 61.5 MB - Last synced at: 21 days ago - Pushed at: over 5 years ago - Stars: 4 - Forks: 1

anayebi/mental-sim

Models of Mental Simulation

Language: Jupyter Notebook - Size: 99.6 KB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 9 - Forks: 0

Arghavankas2022/NMA

Project for 2024 NMA CN course

Language: Jupyter Notebook - Size: 8.69 MB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 0 - Forks: 0

alcrene/pyloric-network-simulator

Pure-Python, JAX-accelerate implementation of the pyloric circuit model described by Prinz et al (Nat. Neurosci., 2004)

Language: Python - Size: 9.47 MB - Last synced at: 10 days ago - Pushed at: 9 months ago - Stars: 0 - Forks: 0

likchun/CUHK-comp-neuro-project

CUHK MPhil Comp. Neuro. Project, 2022-2024

Language: C++ - Size: 4.24 MB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 0 - Forks: 0

meixichen/fastr

Factor analysis of multi-neuron spike trains in R

Language: R - Size: 205 KB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 1 - Forks: 0

MAZI2/Nervous-Computational-Neuroscience

A neural network framework for exploring and recreating brain functions.

Language: C - Size: 3.34 MB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 1 - Forks: 0

pritam5756/Predict-spike-counts-with-Linear-Gaussian-model

This project implements a Linear-Gaussian model to predict neural spike counts based on stimulus data.

Language: Jupyter Notebook - Size: 430 KB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 0 - Forks: 0

tinopenchev/CompNeuro

Comprehensive pre-processing and analysis of EEG/MEG data using advanced machine learning and statistical techniques. Includes data cleaning, feature extraction, and visualization to extract meaningful insights from neuroimaging data.

Language: Jupyter Notebook - Size: 5.03 MB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 0 - Forks: 0

XBTinChina/CCN_Association

่ฎค็Ÿฅ่ฎก็ฎ—็ฅž็ป่”็›Ÿ ่ฎจ่ฎบไผš

Size: 298 KB - Last synced at: 5 months ago - Pushed at: almost 3 years ago - Stars: 54 - Forks: 19

TomGeorge1234/ThetaSequencesAreEligibilityTraces

Code for my paper: "Theta sequences as eligibility traces: a biological solution to credit assignment"

Language: Jupyter Notebook - Size: 2.05 MB - Last synced at: 15 days ago - Pushed at: about 2 years ago - Stars: 3 - Forks: 0

teach-me-codes/computational-neuroscience

:octocat: Learning page for :bulb: Computational-Neuroscience - by :book: TEACH ME CODES

Language: JavaScript - Size: 5.01 MB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 0 - Forks: 0

lacerbi/infbench

Benchmark of posterior and model inference algorithms for (moderately) expensive likelihoods.

Language: MATLAB - Size: 65.4 MB - Last synced at: about 12 hours ago - Pushed at: over 2 years ago - Stars: 6 - Forks: 3

paninski-lab/yass

YASS: Yet Another Spike Sorter

Language: Python - Size: 95.7 MB - Last synced at: 9 months ago - Pushed at: over 2 years ago - Stars: 62 - Forks: 15

Liaro0903/HighK-Marder

Modeling the recovery of bursting of the crab pyloric neurons in 2.5x [K+] saline

Language: MATLAB - Size: 27.4 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 0 - Forks: 0

siplab-gt/tklfp

Lightweight package for computing the kernel LFP approximation from Teleล„czuk et al., 2020

Language: Python - Size: 1.07 MB - Last synced at: 14 days ago - Pushed at: 11 months ago - Stars: 1 - Forks: 0

siplab-gt/wslfp

Lightweight package for computing the Weighted Sum of synaptic currents LFP proxy from Mazzoni, Lindรฉn et al., 2015

Language: Python - Size: 6.73 MB - Last synced at: 8 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0

0xallam/BrainLens

Image Reconstruction from Brain fMRI imaging using Diffusion Models

Language: Python - Size: 1.69 MB - Last synced at: 16 days ago - Pushed at: about 1 year ago - Stars: 2 - Forks: 0

francesco-innocenti/Neuro_AI_Papers

A curated repository of Neuro-AI papers.

Size: 207 KB - Last synced at: 11 months ago - Pushed at: over 3 years ago - Stars: 30 - Forks: 1

francesco-innocenti/fc-simulations

Simulations of different functional connectivity measures.

Language: Python - Size: 43 KB - Last synced at: 11 months ago - Pushed at: over 3 years ago - Stars: 1 - Forks: 0

jonescompneurolab/hnn

The Human Neocortical Neurosolver (HNN) is a software tool that gives researchers/clinicians the ability to develop/test hypotheses on circuit mechanisms underlying EEG/MEG data.

Language: Python - Size: 56.4 MB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 78 - Forks: 22

csinva/csinva.github.io

Slides, paper notes, class notes, blog posts, and research on ML ๐Ÿ“‰, statistics ๐Ÿ“Š, and AI ๐Ÿค–.

Language: HTML - Size: 381 MB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 541 - Forks: 104

jritch/mri_transcriptomics

Gene set enrichment analysis of the transcriptomic associations of the T1-w/T2-w MRI.

Language: R - Size: 23.1 MB - Last synced at: 11 months ago - Pushed at: almost 6 years ago - Stars: 3 - Forks: 2

FabrizioMusacchio/izhikevich_model

Python scripts supporting tutorials on Izhikevich neuron model.

Language: Python - Size: 62.5 KB - Last synced at: about 2 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0

alexandre-laine/2023-INT-StageM1

Repository stage de M1 - NeOpTo de l'INT

Language: Jupyter Notebook - Size: 86.5 MB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 3 - Forks: 0

iraikov/dentate Fork of soltesz-lab/dentate

Full-scale biophysical model of the dentate gyrus

Language: Jupyter Notebook - Size: 57.6 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 0 - Forks: 0

crybot/CNS-2023

Repository holding material and assignments for the Computational Neuroscience course

Language: Jupyter Notebook - Size: 25.5 MB - Last synced at: 12 months ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0

metr0jw/Spiking-Neural-Network-on-FPGA

Leaky Integrate and Fire (LIF) model implementation for FPGA

Language: Verilog - Size: 69.3 KB - Last synced at: 12 months ago - Pushed at: over 1 year ago - Stars: 35 - Forks: 4

cankocagil/CompNeuro

Computational Neuroscience Applications

Language: Jupyter Notebook - Size: 35.8 MB - Last synced at: 12 months ago - Pushed at: over 3 years ago - Stars: 1 - Forks: 0

ArminBaz/LinearRL

Python implementation of the Linear Reinforcement Learning model introduced by Piray and Daw (2021)

Language: Jupyter Notebook - Size: 1.65 MB - Last synced at: 12 months ago - Pushed at: 12 months ago - Stars: 1 - Forks: 0

embodied-computation-group/tidal-computation

Website with data and code for our manuscript on respiratory brain coupling in perception.

Language: Jupyter Notebook - Size: 113 MB - Last synced at: about 1 month ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 0

laurentperrinet/Khoei_2017_PLoSCB

Code to replicate paper โ€œThe flash-lag effect as a motion-based predictive shiftโ€

Language: Jupyter Notebook - Size: 96.1 MB - Last synced at: about 1 year ago - Pushed at: about 4 years ago - Stars: 3 - Forks: 1

JNJER/2021-04-28_transfer_learning

Language: Jupyter Notebook - Size: 202 MB - Last synced at: about 1 year ago - Pushed at: over 3 years ago - Stars: 1 - Forks: 0

josu-ps13/InternshipNISL

Modeling of flying insects' central complex with a spiking neural network

Language: MATLAB - Size: 972 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

zoppellarielena/Estimation-and-Analysis-of-Mutual-Information-in-a-Recurrent-Neural-Network

This project, developed as part of the "Information Theory and Inference" exam, aims to use different discrete and continous estimators to calculate the mutual information between layers of a RNN trained to perform a cognitive task.

Language: Jupyter Notebook - Size: 7.68 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

aluo-x/BrainDiVE

Brain Diffusion for Visual Exploration: Cortical Discovery using Large Scale Generative Models

Language: Python - Size: 47.9 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 7 - Forks: 0

cankocagil/Cognitive-Computational-Modelling-for-Spatio-Temporal-fMRI-in-Ventral-Temporal-Cortex

Multi-voxel pattern analyses methods based on ML & DL to decode the category of visual stimuli viewed by a human subject based on their recorded brain activity in fMRI form

Language: Jupyter Notebook - Size: 28.2 MB - Last synced at: 12 months ago - Pushed at: over 3 years ago - Stars: 16 - Forks: 12

NeuralEnsemble/motionclouds_website

Website for "Model-based stimulus synthesis of natural-like random textures for the study of motion perception"

Language: Jupyter Notebook - Size: 433 MB - Last synced at: about 1 year ago - Pushed at: about 4 years ago - Stars: 4 - Forks: 2

rnartallo/randomlygrownnetworks

Repository for 'Hyper-graphical extensions of randomly grown neural networks'

Language: Jupyter Notebook - Size: 17.2 MB - Last synced at: about 1 year ago - Pushed at: about 3 years ago - Stars: 1 - Forks: 0

mackelab/lfi-experiments

Applications of likelihoodfree to different problems

Language: Jupyter Notebook - Size: 156 MB - Last synced at: about 1 year ago - Pushed at: almost 4 years ago - Stars: 1 - Forks: 0

ejagnes/codependent_plasticity

Code for simulations and some of the plots from article "Co-dependent excitatory and inhibitory plasticity accounts for quick, stable and long-lasting memories in biological networks" by Everton J Agnes and Tim P Vogels

Language: Fortran - Size: 1000 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

pradeepsinngh/masters-thesis

MS Thesis: Models for propagating facilitation in the Insect Visual System.

Language: MATLAB - Size: 11.4 MB - Last synced at: about 1 year ago - Pushed at: almost 5 years ago - Stars: 0 - Forks: 0

katanachan/AInetworks

Asynchronous Irregular Networks in Cortical & Thalamic Regions

Language: Jupyter Notebook - Size: 1.99 MB - Last synced at: about 1 year ago - Pushed at: over 8 years ago - Stars: 0 - Forks: 0

pranaysy/MultimodalDCM

Tutorial covering group DCM analyses of fMRI and M/EEG

Language: MATLAB - Size: 187 KB - Last synced at: 5 months ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 0

genema/TECOS-LVM

[NeurIPS] Temporal Conditioning Spiking Latent Variable Models of the Neural Response to Natural Visual Scenes

Language: Python - Size: 33.2 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

rougier/CNCC-2019

Computational Neuroscience Crash Course (CNCC 2019)

Language: Jupyter Notebook - Size: 12.6 MB - Last synced at: 3 days ago - Pushed at: almost 4 years ago - Stars: 27 - Forks: 5

OpenSourceBrain/OSB_Documentation

Source repository for documentation at Open Source Brain

Size: 385 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 19 - Forks: 9

NACLab/ngc-learn-legacy Fork of NACLab/ngc-learn

NGC-Learn: Predictive Coding and Neurobiologically-Motivated Learning in Python

Language: Python - Size: 47.7 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 0

AaronSpieler/elmneuron

Code related to the ELM neuron.

Language: Jupyter Notebook - Size: 3 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 6 - Forks: 1

Erfan7bt/neurotransmitter_release_modelling

Modelling the release of neurotransmitters

Language: Jupyter Notebook - Size: 5.67 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

CONECT-INT/old_CONECT-INT.github.io

OBSOLETE / this was the compiled repo for the website of the CONECT group

Language: HTML - Size: 21.1 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 0

NevVerVer/neural-dynamics-gyration

A repository containing the code accompanying the research paper "Neuronal travelling waves explain rotational dynamics in experimental datasets and modelling" by Kuzmina E., Kriukov D., Lebedev M.

Language: Jupyter Notebook - Size: 44.2 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 16 - Forks: 0

RodrigoSandon/LBGN

Supervisors: Dr. Patrick Piantadosi and Dr. Andrew Holmes

Language: Jupyter Notebook - Size: 25.6 MB - Last synced at: about 1 year ago - Pushed at: about 3 years ago - Stars: 0 - Forks: 0

visvig/neuroscience-papers

papers referred in Computational Neuroscience course offered by the University of Washington

Size: 2.93 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

InPhyT/Quantitative_Single_Neuron_Modeling_Competition_2009

Data for the Quantitative Single-Neuron Modeling Competition (2009).

Size: 65.6 MB - Last synced at: about 2 months ago - Pushed at: almost 2 years ago - Stars: 1 - Forks: 0

zoppellarielena/Exercises-for-Physical-Models-for-Living-Systems

This repository contains some numerical analysis regarding physical models applied to both Ecology and Neuroscience, written in Python.

Language: Jupyter Notebook - Size: 4.89 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

giovannivolpe/BRAPH-2-Matlab-beta Fork of braph-software/BRAPH-2

BRAPH 2.0 is a comprehensive software package for the analysis and visualization of brain connectivity data, offering flexible customization, rich visualization capabilities, and a platform for collaboration in neuroscience research.

Language: MATLAB - Size: 933 MB - Last synced at: about 1 year ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 0

sanjayankur31/planet-neuroscience

This repository is no longer in use. Please see the current instance of planet neuroscience in the URL

Language: HTML - Size: 584 MB - Last synced at: 6 days ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 2

mrkrd/thorns

Spike analysis software

Language: Python - Size: 828 KB - Last synced at: 3 days ago - Pushed at: about 3 years ago - Stars: 17 - Forks: 10

yousef-seyfari/Computational-Neuroscience

This repository contains some codes for the computational neuroscience.

Language: Jupyter Notebook - Size: 5.01 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

rougier/spatial-computation

Spatial computation

Language: Python - Size: 16.2 MB - Last synced at: 3 days ago - Pushed at: over 3 years ago - Stars: 18 - Forks: 4

paololapo/Dynamic_FC_analysis

BSc thesis. Tools for analyzing rs-fMRI time series (HCP dataset) with Dynamic Functional Connectivity and a whole-brain nonlinear model.

Language: Jupyter Notebook - Size: 155 MB - Last synced at: 9 months ago - Pushed at: over 1 year ago - Stars: 2 - Forks: 0

BlueBrain/RTNeuron ๐Ÿ“ฆ

Interactive visualization framework for geometrically detailed neuron simulations

Language: C++ - Size: 31.7 MB - Last synced at: 5 months ago - Pushed at: almost 3 years ago - Stars: 30 - Forks: 10

AImeetsAG/Threshold-Linear-Networks-Computational-Neuroscience-

Implementation of Curto etal. Combinatorial Threshold Linear Networks which models how memory is formed in the brain

Language: Python - Size: 7.09 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

NeuroML/NeuroML_API

C++ API for NeuroML 2

Language: C++ - Size: 11.1 MB - Last synced at: 24 days ago - Pushed at: over 1 year ago - Stars: 2 - Forks: 3

KyzarNexus/SHAPED-Morph-Gen

A generalized program to create artificial dendritic morphological data from a dataset of organic neuron morphologies. Adapted from Chou 2020: https://www.frontiersin.org/articles/10.3389/fncom.2020.00023/full

Language: Python - Size: 29.9 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

niklasbrake/EEG_modelling

Code for simulating aperiodic EEG signals and detrending EEG spectra, as well as generating figures used in manuscript.

Language: MATLAB - Size: 30.7 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 1

emer/cemer

Original C++ version of emergent: originally hosted under svn at https://grey.colorado.edu/svn/emergent

Language: C++ - Size: 166 MB - Last synced at: about 1 year ago - Pushed at: about 4 years ago - Stars: 9 - Forks: 2

InsectRobotics/InvertPy

Python package of computational models relevant to invertebrate processing, from the environment to sensor responses and to deeper neural responses in the invertebrate brain.

Language: Python - Size: 854 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 4 - Forks: 4

Related Keywords
computational-neuroscience 401 neuroscience 120 python 58 machine-learning 50 spiking-neural-networks 33 deep-learning 29 simulation 26 reinforcement-learning 20 modeling 18 matlab 17 fmri 17 neural-network 17 neural-networks 15 computational-biology 15 artificial-intelligence 15 data-analysis 14 electrophysiology 13 neuron 13 computer-vision 11 neuroml 10 eeg 10 brain 10 cognitive-neuroscience 10 vision 9 tutorial 8 neuromorphic-computing 8 pytorch 8 research 8 functional-connectivity 8 neurons 8 brian2 8 neuroimaging 8 snn 7 cognitive-science 7 dynamical-systems 7 data-science 7 differential-equations 7 nest-simulator 6 theoretical-neuroscience 6 spike-trains 6 network-analysis 6 optimization 6 convolutional-neural-networks 6 brain-imaging 6 data-visualization 6 scientific-computing 6 neuron-model 6 hippocampus 6 recurrent-neural-networks 6 leaky-integrate-and-fire-neuron 6 deep-neural-networks 5 tutorials 5 stdp 5 visualization 5 leaky-integrate-and-fire-model 5 applied-mathematics 5 numpy 5 computational-modelling 5 model 5 ecog 5 signal-processing 5 artificial-neural-networks 5 predictive-coding 5 information-theory 5 fmri-data-analysis 5 learning 4 auditory 4 modelling 4 bayesian-inference 4 open-source 4 course-materials 4 mathematical-modelling 4 human-vision 4 education 4 simulation-modeling 4 neuron-models 4 neuroscience-methods 4 neuron-simulator 4 open-science 4 pca 4 electrophysiological-data 4 matplotlib 4 parameter-estimation 4 biological-simulations 4 artificial-general-intelligence 4 brian 4 awesome 4 encoding-models 4 hopfield-network 4 neuromatch-academy 4 brain-simulations 4 brain-inspired-ai 3 analysis 3 neuronal-dynamics 3 mathematics 3 bayesian-statistics 3 single-neuron-model 3 physics 3 feature-extraction 3 cpp 3