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GitHub topics: parameter-estimation

sbi-dev/sbi

sbi is a Python package for simulation-based inference, designed to meet the needs of both researchers and practitioners. Whether you need fine-grained control or an easy-to-use interface, sbi has you covered.

Language: Python - Size: 112 MB - Last synced at: about 4 hours ago - Pushed at: about 5 hours ago - Stars: 712 - Forks: 194

MunskyGroup/SSIT

Stochastic System Identification Toolkit (SSIT) to model, analyze and design single-cell experiments

Language: MATLAB - Size: 420 MB - Last synced at: about 24 hours ago - Pushed at: about 24 hours ago - Stars: 3 - Forks: 8

AMICI-dev/AMICI

High-performance sensitivity analysis for large ordinary differential equation models

Language: C++ - Size: 211 MB - Last synced at: 1 day ago - Pushed at: 1 day ago - Stars: 122 - Forks: 31

PySATL/pysatl-mpest

PySATL module providing tools for working with mixtures of distributions. In particular, it allows you to evaluate their parameters.

Language: Python - Size: 43.6 MB - Last synced at: 4 days ago - Pushed at: 4 days ago - Stars: 7 - Forks: 5

SciML/QuasiMonteCarlo.jl

Lightweight and easy generation of quasi-Monte Carlo sequences with a ton of different methods on one API for easy parameter exploration in scientific machine learning (SciML)

Language: Julia - Size: 3.45 MB - Last synced at: 2 days ago - Pushed at: 2 days ago - Stars: 114 - Forks: 26

casadi/casadi

CasADi is a symbolic framework for numeric optimization implementing automatic differentiation in forward and reverse modes on sparse matrix-valued computational graphs. It supports self-contained C-code generation and interfaces state-of-the-art codes such as SUNDIALS, IPOPT etc. It can be used from C++, Python or Matlab/Octave.

Language: C++ - Size: 142 MB - Last synced at: 4 days ago - Pushed at: 4 days ago - Stars: 1,944 - Forks: 414

smeznar/SymbolicRegressionToolkit

Toolkit for symbolic regression/equation discovery

Language: Python - Size: 93.3 MB - Last synced at: 5 days ago - Pushed at: 6 days ago - Stars: 5 - Forks: 1

benjisstephens/MathModelImmuneInflammatory

Code for Mathematical Modelling of Immune and Inflammatory Responses dissertation

Language: Python - Size: 74.8 MB - Last synced at: 6 days ago - Pushed at: 6 days ago - Stars: 0 - Forks: 0

openmole/openmole

Workflow engine for exploration of simulation models using high throughput computing

Language: Scala - Size: 151 MB - Last synced at: 6 days ago - Pushed at: 6 days ago - Stars: 145 - Forks: 39

Benchmarking-Initiative/Benchmark-Models-PEtab

A collection of mathematical models with experimental data in the PEtab format as benchmark problems in order to evaluate new and existing methodologies for data-based modelling

Language: Python - Size: 3.06 MB - Last synced at: 7 days ago - Pushed at: 7 days ago - Stars: 29 - Forks: 18

PEtab-dev/libpetab-python

Python package for working with PEtab files

Language: Python - Size: 10.9 MB - Last synced at: 1 day ago - Pushed at: 1 day ago - Stars: 14 - Forks: 7

SciML/DiffEqParamEstim.jl

Easy scientific machine learning (SciML) parameter estimation with pre-built loss functions

Language: Julia - Size: 3.76 MB - Last synced at: 6 days ago - Pushed at: 6 months ago - Stars: 60 - Forks: 34

JuBiotech/estim8

Parameter estimation of bioprocess models

Language: Python - Size: 10.3 MB - Last synced at: 7 days ago - Pushed at: 7 days ago - Stars: 1 - Forks: 0

baggepinnen/ControlSystemIdentification.jl

System Identification toolbox, compatible with ControlSystems.jl

Language: Julia - Size: 378 MB - Last synced at: 8 days ago - Pushed at: 8 days ago - Stars: 147 - Forks: 16

PEtab-dev/PEtab

PEtab - an SBML and TSV based data format for parameter estimation problems in systems biology

Size: 11.4 MB - Last synced at: 7 days ago - Pushed at: 7 days ago - Stars: 60 - Forks: 12

ICB-DCM/pyPESTO

python Parameter EStimation TOolbox

Language: Python - Size: 45.3 MB - Last synced at: 1 day ago - Pushed at: 1 day ago - Stars: 248 - Forks: 47

madsjulia/Mads.jl

MADS: Model Analysis & Decision Support

Language: HTML - Size: 184 MB - Last synced at: 7 days ago - Pushed at: 12 days ago - Stars: 105 - Forks: 21

iliailmer/ParameterEstimation.jl

ParameterEstimation.jl is a Julia package for estimating parameters and initial conditions of ODE models given measurement data.

Language: MATLAB - Size: 14.1 MB - Last synced at: about 9 hours ago - Pushed at: 2 days ago - Stars: 28 - Forks: 8

csu-hmc/opty

A library for using direct collocation in the optimization of dynamic systems.

Language: Python - Size: 2.13 MB - Last synced at: about 7 hours ago - Pushed at: about 2 months ago - Stars: 109 - Forks: 24

PEtab-dev/petab_test_suite

PEtab test suite

Language: Python - Size: 325 KB - Last synced at: 14 days ago - Pushed at: 14 days ago - Stars: 6 - Forks: 3

SciML/StructuralIdentifiability.jl

Fast and automatic structural identifiability software for ODE systems

Language: Julia - Size: 31.8 MB - Last synced at: 6 days ago - Pushed at: 10 days ago - Stars: 122 - Forks: 19

NYU-DiffusionMRI/SMI

Toolbox for parameter estimation of the Standard Model of diffusion in white matter

Language: MATLAB - Size: 1.08 MB - Last synced at: 21 days ago - Pushed at: 21 days ago - Stars: 25 - Forks: 0

TorchMeter/torchmeter

TorchMeter⏲️: Your all-in-one tool for Pytorch model analysis, measuring Params, FLOPs/MACs(aka. MACC or MADD), Memory cost, Inference time and Throughput! ! 🚀

Language: Python - Size: 397 KB - Last synced at: 24 days ago - Pushed at: 24 days ago - Stars: 3 - Forks: 0

msainsburydale/NeuralEstimators.jl

Julia package for neural estimation

Language: Julia - Size: 8.15 MB - Last synced at: 24 days ago - Pushed at: 24 days ago - Stars: 24 - Forks: 2

usgs/pestpp

tools for scalable and non-intrusive parameter estimation, uncertainty analysis and sensitivity analysis

Language: C++ - Size: 1.09 GB - Last synced at: 2 days ago - Pushed at: 26 days ago - Stars: 152 - Forks: 81

ctpeterson/SwissFit

General-purpose library for fitting models to data with correlated Gaussian-distributed noise

Language: Python - Size: 2.01 MB - Last synced at: 26 days ago - Pushed at: 26 days ago - Stars: 2 - Forks: 0

duodenum96/IntrinsicTimescales.jl

A Julia package to estimate Intrinsic (Neural) Timescales (INTs) from time-series data

Language: Julia - Size: 4.17 MB - Last synced at: 15 days ago - Pushed at: 15 days ago - Stars: 1 - Forks: 0

GeoStat-Framework/welltestpy

A python-package for handling well based field campaigns.

Language: Python - Size: 10.2 MB - Last synced at: 1 day ago - Pushed at: 11 months ago - Stars: 36 - Forks: 6

k1m9l/MAnifold_Constrained_Gaussian_Process_Inference

Julia implementation of the MAGI algorithm for Bayesian parameter estimation in dynamical systems

Language: Julia - Size: 1.67 MB - Last synced at: 16 days ago - Pushed at: 30 days ago - Stars: 0 - Forks: 0

janpeter19/BPL_TEST2_Batch_calibration

Material for standard text book model of batch cultivation where model is calibrated using time series data for substrate and cell concentration.

Language: Jupyter Notebook - Size: 24.2 MB - Last synced at: 30 days ago - Pushed at: 30 days ago - Stars: 2 - Forks: 1

baggepinnen/LowLevelParticleFilters.jl

State estimation, smoothing and parameter estimation using Kalman and particle filters.

Language: Julia - Size: 358 MB - Last synced at: 24 days ago - Pushed at: about 1 month ago - Stars: 132 - Forks: 17

SticsRPacks/CroptimizR

Estimate Crop Models' parameters

Language: R - Size: 27.9 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 28 - Forks: 6

spatstat/spatstat.model

Sub-package of spatstat containing functionality for parametric modelling and inference

Language: R - Size: 1.55 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 5 - Forks: 1

stevenalfonso/McmcHermes.jl

A package for performing Metropolis Hasting Algorithm.

Language: Julia - Size: 17.1 MB - Last synced at: 13 days ago - Pushed at: about 1 month ago - Stars: 4 - Forks: 1

AdityaSavara/PEUQSE

Parameter estimation for complex physical problems often suffers from finding ‘solutions’ that are not physically realistic. The PEUQSE software provides tools for finding physically realistic parameter estimates, graphs of the parameter estimate positions within parameter space, and plots of the final simulation results.

Language: Python - Size: 720 MB - Last synced at: 23 days ago - Pushed at: about 2 months ago - Stars: 14 - Forks: 5

biomass-dev/biomass

A Python Framework for Modeling and Analysis of Signaling Systems

Language: Python - Size: 26 MB - Last synced at: 22 days ago - Pushed at: 22 days ago - Stars: 30 - Forks: 13

xpsi-group/xpsi

X-PSI: X-ray Pulse Simulation and Inference

Language: Python - Size: 514 MB - Last synced at: about 8 hours ago - Pushed at: about 1 month ago - Stars: 40 - Forks: 21

pints-team/pints

Probabilistic Inference on Noisy Time Series

Language: Python - Size: 192 MB - Last synced at: 1 day ago - Pushed at: 5 months ago - Stars: 238 - Forks: 34

kmaeda16/libRCGA

libRCGA is a C library for real-coded genetic algorithms (RCGAs).

Language: C - Size: 37.1 KB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 0 - Forks: 0

undark-lab/swyft

A system for scientific simulation-based inference at scale.

Language: Jupyter Notebook - Size: 380 MB - Last synced at: about 10 hours ago - Pushed at: over 1 year ago - Stars: 164 - Forks: 16

uob-positron-imaging-centre/ACCES-CoExSiST

Learning simulation parameters from experimental data, from the micro to the macro, from laptops to clusters.

Language: Python - Size: 17.8 MB - Last synced at: 27 days ago - Pushed at: over 1 year ago - Stars: 19 - Forks: 4

bashar-tahir/PLAIN

Scalable Estimation Architecture for Integrated Sensing and Communication - PLAIN

Language: MATLAB - Size: 146 KB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 2 - Forks: 1

Data2Dynamics/d2d

a modeling environment tailored to parameter estimation in dynamical systems

Language: MATLAB - Size: 255 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 59 - Forks: 29

ma921/SOBER

Fast Bayesian optimization, quadrature, inference over arbitrary domain with GPU parallel acceleration

Language: Jupyter Notebook - Size: 33.4 MB - Last synced at: 22 days ago - Pushed at: 2 months ago - Stars: 26 - Forks: 1

pmocz/mcmc-python

Create Your Own Metropolis-Hastings Markov Chain Monte Carlo Algorithm for Bayesian Inference (With Python)

Language: Python - Size: 235 KB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 43 - Forks: 7

ergodicio/tsadar

The Thomson scattering diagnostic offers a method by which to infer plasma parameters such as n_e, T_e. This approach uses the form factor equations to estimate those plasma parameters by fitting to observed Thomson scattering spectra.

Language: Python - Size: 116 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 3 - Forks: 4

namans-git/statistical_inference

report on stat inference

Language: Jupyter Notebook - Size: 1.1 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 0 - Forks: 0

ngalioto/bside

Bayesian system identification toolbox

Language: Python - Size: 720 KB - Last synced at: 4 days ago - Pushed at: 3 months ago - Stars: 4 - Forks: 0

timcera/tsblender

tsblender is a drop-in replacement (mostly) for TSPROC, rewritten in Python

Language: TeX - Size: 46.7 MB - Last synced at: 17 days ago - Pushed at: 17 days ago - Stars: 2 - Forks: 0

SKYL2R/cleanfm

Implementation of the Dirichlet Kernel Deconvolution algorithm for precise FFT parameter estimation and near-perfect elimination of spectral leakage. Additionally includes the "Cleaned" STFT and the Frequency Modulation Transform. Repository for code contained in Matthew McQuistion's Applied Mathematics Honors Thesis at Brown University

Language: C - Size: 18.8 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0

matthewmcq/cleanfm

Implementation of the Dirichlet Kernel Deconvolution algorithm for precise FFT parameter estimation and spectral leakage elimination. Repository for code contained in Matthew McQuistion's Applied Mathematics Honors Thesis at Brown University

Language: C - Size: 256 KB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 1 - Forks: 0

LIMUNIMI/SAMPLE

Implementation of SAMPLE (Spectral Analysis for Modal Parameter Linear Estimate)

Language: Python - Size: 3.21 MB - Last synced at: 27 days ago - Pushed at: almost 2 years ago - Stars: 7 - Forks: 0

ICB-DCM/parPE

Parameter estimation for dynamical models using high-performance computing, batch and mini-batch optimizers, and dynamic load balancing.

Language: C++ - Size: 56.5 MB - Last synced at: 26 days ago - Pushed at: 5 months ago - Stars: 22 - Forks: 4

elcorto/psweep

Loop like a pro, make parameter studies fun.

Language: Python - Size: 6.86 MB - Last synced at: 28 days ago - Pushed at: 3 months ago - Stars: 17 - Forks: 2

kkovlakas/gaussfree

Tools for non-Gaussian statistics

Language: Python - Size: 5.15 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0

vsquicciarini/madys

MADYS: isochronal parameter determination for young stellar and substellar objects

Language: Python - Size: 32.2 MB - Last synced at: 27 days ago - Pushed at: 3 months ago - Stars: 7 - Forks: 0

karahanyilmazer/dcsem

Simulate fMRI data with Dynamic Causal Modeling. Show model degeneracy through model inversion. Address this issue with BENCH (Bayesian EstimatioN of CHange).

Language: Python - Size: 2.09 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 2 - Forks: 1

AleksandarHaber/Disciplined-Python-Implementation-of-the-Recursive-Least-Squares-Method

This is a disciplined Python implementation of the Recursive Least Squares Method

Language: Python - Size: 673 KB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 16 - Forks: 0

KRproject-tech/Parameter_estimation_demo_by_UKF

Parameter estimation Demo by UKF

Language: MATLAB - Size: 479 KB - Last synced at: 3 months ago - Pushed at: 10 months ago - Stars: 3 - Forks: 2

weijie-chen/Basic-Statistics-With-Python

Introduction to statistics featuring Python. This series of lecture notes aim to walk you through all basic concepts of statistics, such as descriptive statistics, parameter estimations, hypothesis testing, ANOVA and etc. All codes are straightforward to understand.

Language: Jupyter Notebook - Size: 8.1 MB - Last synced at: 3 months ago - Pushed at: about 1 year ago - Stars: 114 - Forks: 44

sdu-cfei/modest-py

FMI-compliant Model Estimation in Python

Language: Python - Size: 9.05 MB - Last synced at: 15 days ago - Pushed at: about 3 years ago - Stars: 52 - Forks: 13

AAU-Dat/P9-BW-ADD

This is the 9th semester project for implementing the Baum-Welch (BW) algorithm using Algebraic Decision Diagrams (ADD).

Language: TeX - Size: 7.41 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 2 - Forks: 0

USC-QED-HW/Covid19MLNetworkedSim

Implementation and relevant scripts for HW QED Research Project.

Language: Jupyter Notebook - Size: 274 MB - Last synced at: 4 months ago - Pushed at: over 3 years ago - Stars: 1 - Forks: 0

mauricelanghinrichs/memocell

Bayesian inference of stochastic cellular processes with and without memory in Python.

Language: Python - Size: 55.4 MB - Last synced at: 20 days ago - Pushed at: 4 months ago - Stars: 1 - Forks: 1

mauricelanghinrichs/ABCdeZ.jl

Approximate Bayesian Computation (ABC) with differential evolution (de) moves and model evidence (Z) estimates.

Language: Julia - Size: 894 KB - Last synced at: 3 months ago - Pushed at: 4 months ago - Stars: 12 - Forks: 1

bor9/estudiando_el_kay

Apuntes y soluciones de los ejercicios del libro "Fundamentals of Statistical Signal Processing: Estimation Theory" de Steven M. Kay.

Language: TeX - Size: 26.3 MB - Last synced at: 3 months ago - Pushed at: over 2 years ago - Stars: 4 - Forks: 1

roysouvik2/colon_cancer_parameter_estimation_sensitivity_analysis

Codes for parameter estimation and sensitivity analysis of QSP models for colon cancer. This is a part of the National Cancer Institute funded project titled "Data-driven QSP software for personalized colon cancer treatment" Achyuth Manoj, Susanth Kakarla, Suvra Pal and Souvik Roy.

Language: MATLAB - Size: 2.05 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 3 - Forks: 2

britzger/LinearTemplateFit

The Linear Template Fit

Language: C++ - Size: 1.24 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 1 - Forks: 3

DavAug/chi

Chi is an open source Python package which is designed for PKPD modelling and model-informed precision dosing (MIPD).

Language: Python - Size: 1.06 GB - Last synced at: about 17 hours ago - Pushed at: about 1 year ago - Stars: 10 - Forks: 5

jpgsantos/Subcellular_workflow

A workflow developed to tackle the challenge of building and analyzing biochemical pathway models, combining pre-existing tools and custom-made software.

Language: Component Pascal - Size: 760 MB - Last synced at: 3 months ago - Pushed at: 6 months ago - Stars: 2 - Forks: 0

kjyv/FloBaRoID

Framework for dynamical system identification of floating-base rigid body tree structures

Language: Python - Size: 49.5 MB - Last synced at: 3 months ago - Pushed at: over 6 years ago - Stars: 63 - Forks: 26

LijinWilson/CMOS-Inverter

This repository contains the design, simulation, and analysis of a CMOS Inverter using industry-standard tools like Cadence Virtuoso. The project focuses on understanding and optimizing the fundamental building block of digital circuits—the CMOS inverter.

Size: 0 Bytes - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 1 - Forks: 0

LoLab-MSM/Gleipnir

Python toolkit for Bayesian parameter inference, model calibration, and model selection using Nested Sampling

Language: Python - Size: 359 KB - Last synced at: 2 months ago - Pushed at: over 4 years ago - Stars: 4 - Forks: 2

Jamiree/Estimating-Varying-Parameters-in-Dynamical-Systems

All notebooks used to generate results and figures in the paper linked below.

Language: Jupyter Notebook - Size: 6.29 MB - Last synced at: 7 months ago - Pushed at: 7 months ago - Stars: 1 - Forks: 0

madsjulia/GeostatInversion.jl

Geostatistical Inversion

Language: Julia - Size: 188 KB - Last synced at: about 2 months ago - Pushed at: 7 months ago - Stars: 5 - Forks: 6

asanet/chemeng-solved

Classic problems in chemical engineering solved with matlab

Language: MATLAB - Size: 45.9 KB - Last synced at: 5 months ago - Pushed at: almost 6 years ago - Stars: 21 - Forks: 2

ast0815/remu

ReMU - Response Matrix Utilities

Language: Python - Size: 114 MB - Last synced at: 22 days ago - Pushed at: 22 days ago - Stars: 5 - Forks: 1

blakeaw/GAlibrate

Parameter estimation and model calibration using Genetic Algorithm optimization in Python.

Language: Jupyter Notebook - Size: 396 KB - Last synced at: 29 days ago - Pushed at: 11 months ago - Stars: 12 - Forks: 4

OpenModelica/OMSysIdent

OpenModelica parameter estimation on top of OMSimulator

Language: C++ - Size: 7.3 MB - Last synced at: 3 months ago - Pushed at: almost 4 years ago - Stars: 7 - Forks: 3

SrotoshiGhosh/Bayesian-Inference-and-MCMC

Various codes centered around problems in Bayesian inference, Bayesian Linear Regression, and Bayesian Non-Linear Parameter Estimation using the application of various Markov Chain Monte Carlo Algorithms

Language: Python - Size: 85 KB - Last synced at: 8 months ago - Pushed at: 8 months ago - Stars: 0 - Forks: 0

glotaran/TIMP

TIMP is an R package for fitting superposition models that implements the partitioned variable projection algorithm. The package has been extensively applied to modeling spectroscopy and Fluorescence Lifetime Imaging Microscopy (FLIM) datasets. This is the git managed codebase of the r-forge TIMP project.

Language: R - Size: 26.1 MB - Last synced at: 8 days ago - Pushed at: over 2 years ago - Stars: 3 - Forks: 1

Ahzyuan/TorchGauge

TorchGauge ⏲️: Your all-in-one tool for Pytorch model analysis, measuring Params, FLOPs/MACs(aka. MACC or MADD), Memory cost, Inference time and Throughput! ! 🚀

Language: Shell - Size: 17.6 KB - Last synced at: 8 months ago - Pushed at: 8 months ago - Stars: 0 - Forks: 0

CliMA/ParameterEstimocean.jl

🎲 Parameter estimation for Oceananigans using EnsembleKalmanProcesses

Language: Julia - Size: 114 MB - Last synced at: 6 months ago - Pushed at: 7 months ago - Stars: 21 - Forks: 6

alexandershaw4/aoptim

a gradient-based optimisation routine for highly parameterised non-linear dynamical models

Language: MATLAB - Size: 7 MB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 4 - Forks: 0

mechmotum/ollie-optimization

Optimal control and parameter optimization for a maximal height ollie problem

Language: TeX - Size: 32.2 MB - Last synced at: 29 days ago - Pushed at: over 1 year ago - Stars: 3 - Forks: 0

subham-agrawall/airship-parameter-estimation

Nonlinear parameter estimation of airship using modular neural network.

Language: Python - Size: 198 MB - Last synced at: about 1 month ago - Pushed at: over 4 years ago - Stars: 3 - Forks: 3

emavit/ControlEngineeringLaboratory

Exam of Control Engineering Laboratory from Prof. Ticozzi (A.A. 2022/2023).

Language: MATLAB - Size: 562 MB - Last synced at: 9 months ago - Pushed at: almost 2 years ago - Stars: 1 - Forks: 0

moucheng2017/MRI-GMM-VAE

[Under construction] MRI Parameter Mapping without Independent Voxel Assumption via Gaussian Mixture Variational Autoencoder

Language: Jupyter Notebook - Size: 5.98 MB - Last synced at: 8 months ago - Pushed at: 8 months ago - Stars: 1 - Forks: 0

isaacsas/SPRFittingPaper2023.jl

Library for estimating biophysical properties of antibody-antigen interactions via a spatial, particle model.

Language: Julia - Size: 14.3 MB - Last synced at: 4 months ago - Pushed at: 5 months ago - Stars: 0 - Forks: 0

DanielVandH/ProfileLikelihood.jl

Methods for profile likelihood analysis.

Language: Julia - Size: 18.9 MB - Last synced at: 12 days ago - Pushed at: 8 months ago - Stars: 18 - Forks: 3

sinagilassi/PyREMOT

Python Reactor Modeling Tools

Language: Python - Size: 1 MB - Last synced at: 2 days ago - Pushed at: over 1 year ago - Stars: 6 - Forks: 2

joelnmdyer/sbi4abm

Black-box Bayesian inference for agent-based models in the social sciences

Language: Python - Size: 561 KB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 13 - Forks: 7

Christian-F-Badillo/Temas_Selectos_en_Estadistica

Repositorio para el curso intersemestral "Temas Selectos en Estadística" para la Facultad de Psicología, UNAM.

Language: Jupyter Notebook - Size: 47 MB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 1 - Forks: 0

msplr/nls

Experimenting with non-linear least squares problems

Language: C++ - Size: 277 KB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 3 - Forks: 0

sob-ANN/Projects

Project Portfolio

Language: Jupyter Notebook - Size: 10.9 MB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 1 - Forks: 0

CiaranWelsh/pycotools3

A Python toolbox for COPASI

Language: Python - Size: 768 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 13 - Forks: 3

PEREGRINE-GW/peregrine

A simulation-based Inference (SBI) library designed to perform analysis on a wide class of gravitational wave signals

Language: Python - Size: 1.94 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 12 - Forks: 5

Parametric-Data-Assimilation/kse-multiparameter-learning

An AOT-based algorithm to estimate multiple unknown parameters in the Kuramoto-Saviashinski equation. Source code for the paper "Concurrent Multiparameter Learning Demonstrated on the Kuramoto-Sivashinsky Equation" by Pachev, Whitehead, and McQuarrie.

Language: Python - Size: 30.3 KB - Last synced at: 17 days ago - Pushed at: almost 3 years ago - Stars: 3 - Forks: 0

MyrenRajh/MRN_deeplearn_param_estimation

Machine Learning for Solving the Inverse Problem of Estimating Plate Properties from Modal Responses

Language: Jupyter Notebook - Size: 62.2 MB - Last synced at: 3 months ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

siegmone/bsc-thesis

Code for parameter estimation for my BSc thesis work @ University Fedeerico II of Naples

Language: Python - Size: 114 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

Related Keywords
parameter-estimation 226 python 31 bayesian-inference 24 machine-learning 23 optimization 23 systems-biology 22 matlab 17 simulation 16 modeling 13 julia 11 uncertainty-quantification 11 kalman-filter 9 ode 8 statistics 8 bayesian-statistics 8 python3 8 r 8 model-calibration 7 sbml 7 dynamical-systems 7 petab 7 astronomy 7 computational-biology 7 kinetic-modeling 6 system-identification 6 bayesian-methods 6 sensitivity-analysis 6 least-squares 6 bayesian-optimization 6 differential-equations 6 covid-19 5 markov-chain 5 statistical-inference 5 gravitational-waves 5 simulation-based-inference 5 pytorch 5 scientific-computing 5 gradient-descent 5 state-space-model 5 neuroscience 5 genetic-algorithm 5 calibration 5 hacktoberfest 5 deep-learning 5 computational-neuroscience 4 linear-regression 4 inverse-problems 4 hypothesis-testing 4 ligo 4 pycbc 4 model-analysis 4 virgo 4 high-performance-computing 4 estimation 4 regression 4 ordinary-differential-equations 4 stochastic-differential-equations 4 model-selection 4 time-series 4 sir-model 4 simulation-modeling 4 automatic-differentiation 3 em-algorithm 3 control-systems 3 data 3 approximate-bayesian-computation 3 kalman-filtering 3 numerical-optimization 3 parallel-computing 3 differentialequations 3 systems-biology-simulation 3 differential-algebraic-equations 3 data-science 3 modelling 3 simulink 3 signal-processing 3 neural-networks 3 likelihood-free-inference 3 numpy 3 parameter-tuning 3 maximum-likelihood-estimation 3 ode-model 3 optimal-control 3 stochastic-processes 3 fm 2 deconvolution 2 cleanfm 2 brown-university 2 fourier-transform 2 pest 2 nonlinear-dynamics 2 frequency-analysis 2 frequency-modulation 2 dsp 2 resampling 2 random-forest 2 data-assimilation 2 monte-carlo-methods 2 state-estimation 2 unscented-kalman-filter 2