Ecosyste.ms: Repos

An open API service providing repository metadata for many open source software ecosystems.

GitHub topics: simulation-based-inference

msainsburydale/NeuralEstimators.jl

Julia package for neural estimation

Language: Julia - Size: 2.4 MB - Last synced: about 3 hours ago - Pushed: about 9 hours ago - Stars: 11 - Forks: 0

sbi-dev/sbi

Simulation-based inference toolkit

Language: Python - Size: 74.6 MB - Last synced: about 3 hours ago - Pushed: about 4 hours ago - Stars: 521 - Forks: 126

ma921/SOBER

Fast Bayesian optimization, quadrature, inference over arbitrary domain with GPU parallel acceleration

Language: Jupyter Notebook - Size: 33.1 MB - Last synced: 3 days ago - Pushed: 3 days ago - Stars: 17 - Forks: 2

Spinkoo/Simulink-based-inference

This repo contains examples of how to use Simulink simulation to perform simulation-based inference calculations in Python

Language: Jupyter Notebook - Size: 306 KB - Last synced: 3 days ago - Pushed: 3 days ago - Stars: 2 - Forks: 0

swagnercarena/paltas

Conduct simulation-based inference on strong gravitational lensing systems.

Language: Python - Size: 7.76 MB - Last synced: 5 days ago - Pushed: 12 days ago - Stars: 12 - Forks: 11

ThomasGesseyJones/FullyBayesianForecastsExample

Example of a fully Bayesian forecast using evidence networks applied to 21-cm cosmology

Language: TeX - Size: 5.73 MB - Last synced: 6 days ago - Pushed: 6 days ago - Stars: 6 - Forks: 1

dirmeier/sbijax

Simulation-based inference in JAX

Language: Python - Size: 391 KB - Last synced: 7 days ago - Pushed: 7 days ago - Stars: 10 - Forks: 1

probabilists/lampe

Likelihood-free AMortized Posterior Estimation with PyTorch

Language: Python - Size: 3.68 MB - Last synced: 6 days ago - Pushed: 3 months ago - Stars: 105 - Forks: 8

smsharma/awesome-neural-sbi

Community-sourced list of papers and resources on neural simulation-based inference.

Size: 51.8 KB - Last synced: 1 day ago - Pushed: about 2 months ago - Stars: 60 - Forks: 3

undark-lab/swyft

A system for scientific simulation-based inference at scale.

Language: Jupyter Notebook - Size: 380 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 151 - Forks: 13

tillahoffmann/summaries2

Language: Python - Size: 171 KB - Last synced: about 1 month ago - Pushed: 7 months ago - Stars: 0 - Forks: 0

hyunjimoon/SBC

Language: R - Size: 74.1 MB - Last synced: 16 days ago - Pushed: 17 days ago - Stars: 46 - Forks: 3

wangbingjie/sbi_pp

Simulation-based (likelihood-free) inference customized for astronomical applications

Language: Jupyter Notebook - Size: 491 KB - Last synced: about 1 month ago - Pushed: 3 months ago - Stars: 22 - Forks: 1

PEREGRINE-GW/peregrine

A simulation-based Inference (SBI) library designed to perform analysis on a wide class of gravitational wave signals

Language: Python - Size: 1.68 MB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 10 - Forks: 4

rbarrue/sally_cpv_wh

Created for benchmarking different techniques to search for CP violation in the HWW vertex in leptonic WH production.

Language: Python - Size: 197 KB - Last synced: 3 months ago - Pushed: 3 months ago - Stars: 2 - Forks: 1

montefiore-ai/hypothesis

A Python toolkit for (simulation-based) inference and the mechanization of science.

Language: Python - Size: 5.43 MB - Last synced: 3 months ago - Pushed: about 2 years ago - Stars: 47 - Forks: 5

JBris/model-calibration-evaluation

Evaluating model calibration methods for sensitivity analysis, uncertainty analysis, optimisation, and Bayesian inference

Language: Python - Size: 3.92 MB - Last synced: 3 months ago - Pushed: 3 months ago - Stars: 5 - Forks: 0

VogelsLab/fSBI

Companion code to Confavreux*, Ramesh*, Goncalves, Macke* & Vogels*, Meta-learning families of plasticity rules in recurrent spiking networks using simulation-based inference, NeurIPS 2023

Language: Jupyter Notebook - Size: 109 MB - Last synced: 3 months ago - Pushed: 3 months ago - Stars: 1 - Forks: 0

trivnguyen/JeansGNN

Neural Simulation-based Inference with GNN for Jeans Modeling

Language: Jupyter Notebook - Size: 10.6 MB - Last synced: 4 months ago - Pushed: 4 months ago - Stars: 7 - Forks: 2

ma921/BASQ

(NeurIPS 2022) Fast Bayesian Inference with Batch Bayesian Quadrature via Kernel Recombination

Language: Python - Size: 4.13 MB - Last synced: 5 months ago - Pushed: 5 months ago - Stars: 15 - Forks: 1

smsharma/jax-conditional-flows

Normalizing flow models allowing for a conditioning context, implemented using Jax, Flax, and Distrax.

Language: Jupyter Notebook - Size: 1.31 MB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 7 - Forks: 3

mackelab/delfi 📦

Density estimation likelihood-free inference. No longer actively developed see https://github.com/mackelab/sbi instead

Language: Python - Size: 8.18 MB - Last synced: 6 months ago - Pushed: almost 4 years ago - Stars: 71 - Forks: 29

NoemiAM/detection_is_truncation

Detection is truncation: studying source populations with truncated marginal neural ratio estimation. Code repository associated with https://arxiv.org/abs/2211.04291.

Language: Jupyter Notebook - Size: 6.35 MB - Last synced: 8 months ago - Pushed: 8 months ago - Stars: 0 - Forks: 0

mackelab/sbi-for-connectomics

Research code and results for the paper "Simulation-based inference for computational connectomics" (Boelts et al. 2023, @janfb)

Language: Jupyter Notebook - Size: 8.94 MB - Last synced: 8 months ago - Pushed: 8 months ago - Stars: 1 - Forks: 2

JoeriHermans/constraining-dark-matter-with-stellar-streams-and-ml

Probing the nature of dark matter by inferring the dark matter particle mass with machine learning and stellar streams.

Language: Jupyter Notebook - Size: 12.8 MB - Last synced: 8 months ago - Pushed: over 1 year ago - Stars: 15 - Forks: 3

yandexdataschool/inverse-problem-intensive

A short course on simulation-based infernce for physics at YSDA in April 2021

Language: Jupyter Notebook - Size: 8.57 MB - Last synced: 9 months ago - Pushed: about 3 years ago - Stars: 7 - Forks: 1

smsharma/hierarchical-inference

Hierarchical neural SBI over event ensembles. Code repository associated with https://arxiv.org/abs/2306.12584.

Language: Jupyter Notebook - Size: 2.52 MB - Last synced: 9 months ago - Pushed: 10 months ago - Stars: 9 - Forks: 0

montefiore-ai/balanced-nre

Code for the paper "Towards Reliable Simulation-Based Inference with Balanced Neural Ratio Estimation".

Language: Jupyter Notebook - Size: 2.98 MB - Last synced: 12 months ago - Pushed: over 1 year ago - Stars: 11 - Forks: 2

mlcolab/sbi-workshop

SBI Workshop jointly by Helmholtz AI + ML ⇌ Science Colaboratory

Language: Jupyter Notebook - Size: 38.7 MB - Last synced: 9 months ago - Pushed: about 1 year ago - Stars: 18 - Forks: 5

MaximeVandegar/NEB

Code for reproducing the experiments in the paper Neural Empirical Bayes: Source Distribution Estimation and its Applications to Simulation-Based Inference.

Language: Python - Size: 12 MB - Last synced: about 1 year ago - Pushed: almost 2 years ago - Stars: 8 - Forks: 0

francois-rozet/amnre 📦

Arbitrary Marginal Neural Ratio Estimation for Likelihood-free Inference

Language: Python - Size: 3.84 MB - Last synced: about 1 year ago - Pushed: almost 2 years ago - Stars: 2 - Forks: 0

probcomp/Genify.jl

Automatically convert Julia methods to Gen functions.

Language: Julia - Size: 1.25 MB - Last synced: about 1 year ago - Pushed: almost 3 years ago - Stars: 46 - Forks: 1

JuliaEpi/MathepiaInference.jl

Bayesian inference tools. Including state-of-the-art inference methods: HMC family, ABC family, Data assimilation, and so on. Part of Mathepia.jl

Language: Julia - Size: 96.7 KB - Last synced: 3 months ago - Pushed: over 1 year ago - Stars: 1 - Forks: 0

tillahoffmann/summaries

Comparison of summary statistic selection methods with a unifying perspective.

Language: Python - Size: 229 KB - Last synced: about 1 month ago - Pushed: 10 months ago - Stars: 0 - Forks: 0

nicolossus/pylfi

pyLFI is a Python toolbox using likelihood-free inference (LFI) methods for estimating the posterior distributions of model parameters.

Language: Python - Size: 9.31 MB - Last synced: about 1 year ago - Pushed: over 2 years ago - Stars: 1 - Forks: 0

florent-leclercq/correlations_vs_field

Correlation functions versus field-level inference in cosmology: example with log-normal fields

Language: Jupyter Notebook - Size: 130 MB - Last synced: 3 months ago - Pushed: over 1 year ago - Stars: 4 - Forks: 0

Related Keywords
simulation-based-inference 36 likelihood-free-inference 15 machine-learning 11 bayesian-inference 10 deep-learning 6 approximate-bayesian-computation 6 python 6 parameter-estimation 5 inference 4 cosmology 4 astrophysics 4 pytorch 4 abc 3 likelihood-free 3 density-estimation 3 neural-ratio-estimation 3 normalizing-flows 3 data-assimilation 2 statistics 2 pytorch-lightning 2 bayesian-optimization 2 gravitational-waves 2 sbi 2 bayesian-quadrature 2 quadrature 2 global-optimization 2 summary-statistics 2 neural-ode 1 optimisation 1 surrogate-based-optimization 1 hierarchical-models 1 neural-sbi 1 markov-chain-monte-carlo 1 dark-matter 1 connectomics 1 point-sources 1 detection-network 1 neural-networks 1 pytorch-geometric 1 graph-neural-networks 1 geometric-deep-learning 1 synaptic-plasticity 1 spiking-networks 1 neuroscience 1 marginal-neural-ratio-estimation 1 cosmological-inference 1 bayesian-data-analysis 1 information-theory 1 data-compression 1 conditional-density-estimation 1 monto-carlo 1 mcmc-sampler 1 mcmc 1 langevin-mc 1 program-transformation 1 probabilistic-programming 1 likelihood-ratio 1 source-distribution-estimation 1 neural-empirical-bayes 1 inverse-problems 1 empirical-bayes 1 paper 1 classification 1 particle-physics 1 neural-simulation-based-inference 1 lfi 1 probability 1 density-ratio-estimation 1 bayesian 1 smc-abc 1 bayesian-methods 1 astronomy 1 21cm-signal 1 neural-network 1 hierarchical-model 1 simulink 1 simulation-based-optimization 1 matlab 1 machine-learning-tutorials 1 optimization 1 drug-discovery 1 blackbox-optimization 1 meta-learning 1 uncertainty-analysis 1 surrogate-models 1 sobol-indices 1 shuffled-complex-evolution 1 sensitivity-analysis 1 pymc 1 polynomial-chaos-expansion 1 polynomial-chaos 1 optuna 1 kriging 1 generative-neural-network 1 differential-evolution-mcmc 1 bolfi 1 bayesian-statistics 1 algorithm 1 sed-fitting 1 diagnostics 1