GitHub topics: dna-barcoding
bebop/poly
A Go package for engineering organisms.
Language: Go - Size: 11 MB - Last synced at: 3 days ago - Pushed at: 6 months ago - Stars: 696 - Forks: 73
jphill01/HACSim.R
Iterative extrapolation of species haplotype accumulation curves for genetic diversity assessment.
Language: R - Size: 1.72 MB - Last synced at: about 1 month ago - Pushed at: 7 months ago - Stars: 0 - Forks: 4
mdcjansen/DBA
DNA barcoding analysis pipeline
Language: Python - Size: 16.7 MB - Last synced at: about 2 months ago - Pushed at: almost 2 years ago - Stars: 1 - Forks: 1
naturalis/barcode-constrained-phylogeny
Pipeline for building topologically-constrained phylogenies from DNA barcode data
Language: Python - Size: 3.32 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 3
CNuge/coil
An R package for pre-processing and error evaluation of COI-5P barcode data
Language: R - Size: 1.21 MB - Last synced at: over 1 year ago - Pushed at: about 3 years ago - Stars: 2 - Forks: 1
kokinide/PARSID
Parser of BLAST results
Language: Python - Size: 64.5 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0
parsons463/HiddenDiversity
This repository contains data and code from the manuscript, "Analysis of biodiversity data suggests that species are hidden in predictable places".
Language: R - Size: 17.5 MB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 2 - Forks: 0
manaakiwhenua/Fast_DNA_barcoding
Bioinformatic processes used to obtain invertebrate DNA barcodes from Illumina sequencing output
Language: Python - Size: 23.4 KB - Last synced at: over 1 year ago - Pushed at: almost 3 years ago - Stars: 0 - Forks: 1
rdmpage/dimacs-dnabarcode-challenge
Files from DIMACS 2007 DNA barcoding challenge
Language: C - Size: 16.2 MB - Last synced at: about 2 months ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0
Jonathan-Edwall/Development-of-a-Dna-barcode-for-species-identification-of-tuna
Repository containing a python script for barcode gap plotting, as well as an example input-file for the script.
Language: Python - Size: 231 KB - Last synced at: about 2 years ago - Pushed at: almost 3 years ago - Stars: 0 - Forks: 0
CNuge/debar
A sequence-by-sequence denoiser for COI DNA barcode and metabarcode data
Language: R - Size: 4.98 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 2