GitHub topics: dna-barcode
bebop/poly
A Go package for engineering organisms.
Language: Go - Size: 11 MB - Last synced at: 3 days ago - Pushed at: 8 months ago - Stars: 701 - Forks: 72
boopsboops/spider
Official GitHub repository for the R package "Species Identity and Evolution in R" (spider)
Language: R - Size: 209 KB - Last synced at: 29 days ago - Pushed at: 29 days ago - Stars: 2 - Forks: 1
Koeng101/dnadesign
A Go package for designing DNA.
Language: Go - Size: 36.8 MB - Last synced at: 16 days ago - Pushed at: 6 months ago - Stars: 31 - Forks: 1
gear-genomics/bgen
Barcode Generator
Language: JavaScript - Size: 567 KB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 3 - Forks: 2
rdmpage/bold-literature-harvest
Harvest literature from BOLD website
Language: PHP - Size: 5.6 MB - Last synced at: 2 months ago - Pushed at: 4 months ago - Stars: 0 - Forks: 0
mdcjansen/DBA
DNA barcoding analysis pipeline
Language: Python - Size: 16.7 MB - Last synced at: 3 months ago - Pushed at: almost 2 years ago - Stars: 1 - Forks: 1
brendanf/rITSx
Extract ITS and Neighboring Regions from Eukaryotic DNA Sequences
Language: R - Size: 20.5 KB - Last synced at: 12 months ago - Pushed at: 12 months ago - Stars: 2 - Forks: 0
gear-genomics/bistro
bistro: barcode distribution
Language: HTML - Size: 198 KB - Last synced at: about 1 year ago - Pushed at: almost 2 years ago - Stars: 2 - Forks: 2
stevexniu/fishprobe
FISHprobe: DNA Probe Design Pipeline
Language: HTML - Size: 87.6 MB - Last synced at: over 1 year ago - Pushed at: almost 4 years ago - Stars: 0 - Forks: 0
Landrylab/Evans-Yamamoto_et_al_2021
Jupyter notebooks for BFG-PCA related simulation and analysis.
Language: Python - Size: 28 MB - Last synced at: about 2 months ago - Pushed at: over 1 year ago - Stars: 2 - Forks: 0
m-orton/Arctic-Biogeographical-Analysis-Pipeline
Arctic Community Similarity using DNA Barcoding Data
Language: R - Size: 23.4 MB - Last synced at: over 1 year ago - Pushed at: over 6 years ago - Stars: 3 - Forks: 0
DanYamamotoEvans/BFG-PCA
Jupyter notebooks for BFG-PCA related simulation and analysis.
Language: Python - Size: 28.5 MB - Last synced at: 10 months ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0
LaoZZZZZ/bartender-1.1
This bartender version could handle arbitrary length of barcode
Language: C++ - Size: 293 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 26 - Forks: 11
ekaminuma/BARCODE_STAT
DNA BARCODE Statistics : Number of GBIF BOLD entries 2014-11-27
Language: Matlab - Size: 1.76 MB - Last synced at: over 2 years ago - Pushed at: over 9 years ago - Stars: 1 - Forks: 0
itu-bioinformatics-database-lab/Hierarchical-Supervised-Learners
Artifact repository for the paper "Scalable Classification of Organisms into a Taxonomy Using Hierarchical Supervised Learners", Journal of Bioinformatics and Computational Biology, 18(05), 2050026. doi:10.1142/S0219720020500262
Language: Jupyter Notebook - Size: 12.4 MB - Last synced at: about 2 years ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 1
Jonathan-Edwall/Development-of-a-Dna-barcode-for-species-identification-of-tuna
Repository containing a python script for barcode gap plotting, as well as an example input-file for the script.
Language: Python - Size: 231 KB - Last synced at: about 2 years ago - Pushed at: about 3 years ago - Stars: 0 - Forks: 0
m-orton/PlotlyMapTutorial
Map plotting with Plotly using public BOLD API COI data
Language: R - Size: 17.6 KB - Last synced at: over 1 year ago - Pushed at: about 7 years ago - Stars: 1 - Forks: 0
shalinshah1993/temporalDNAbarcodes
A MATLAB suite implementing computer vision pipeline to extract information from the noisy TIRF microscopy data (image stack)
Language: MATLAB - Size: 81.5 MB - Last synced at: 4 days ago - Pushed at: over 5 years ago - Stars: 0 - Forks: 2
GBIF-Europe/bold_sequence
Linking BOLD sequences to specimens in GBIF
Size: 7.81 KB - Last synced at: over 1 year ago - Pushed at: over 7 years ago - Stars: 1 - Forks: 0
