Ecosyste.ms: Repos
An open API service providing repository metadata for many open source software ecosystems.
GitHub topics: gene-signatures
jackbibby1/SCPA
R package for pathway analysis in scRNA-seq data
Language: R - Size: 41.2 MB - Last synced: 29 days ago - Pushed: 29 days ago - Stars: 53 - Forks: 4
wejlab/TBSignatureProfiler
Profile RNA-seq data using published TB gene signatures
Language: R - Size: 15.4 MB - Last synced: 21 days ago - Pushed: about 1 month ago - Stars: 11 - Forks: 12
cbg-ethz/scDEF
Deep exponential families for single-cell data.
Language: Python - Size: 38 MB - Last synced: 27 days ago - Pushed: 4 months ago - Stars: 15 - Forks: 0
vanallenlab/beanie
Tool for group biology estimation in single-cell RNAseq data
Language: Python - Size: 21.5 MB - Last synced: 8 months ago - Pushed: 10 months ago - Stars: 4 - Forks: 1
MayurDivate/DeepCancerSignatures
This repository contains code used to build and interpret a deep learning model. It is a DNN classifier trained using gene expression data (TCGA). Then is interpreted to identify cancer specific gene expression signatures.
Language: Jupyter Notebook - Size: 688 KB - Last synced: about 1 year ago - Pushed: almost 3 years ago - Stars: 7 - Forks: 2
marchionniLab/BiologicalConstraints
Using biological constraints to improve the performance of transcriptomic gene signatures
Language: R - Size: 19.9 MB - Last synced: 10 months ago - Pushed: almost 2 years ago - Stars: 1 - Forks: 0
