GitHub topics: genome-size
mbhall88/lrge
Genome size estimation from long read overlaps
Language: Rust - Size: 91.8 MB - Last synced at: 6 days ago - Pushed at: about 1 month ago - Stars: 55 - Forks: 2
hannesbecher/shiny-k-mers
Tetemer, an R package and Shiny app for interactively fitting population parameters to k-mer spectra of diploids, triploids, and tetraploids (allo and auto)
Language: R - Size: 1.69 MB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 11 - Forks: 1
raymondkiu/bioinformatics-tools
Small and simple scripts useful for various bioinformatics purposes e.g. extract sequences from fasta files
Language: Shell - Size: 78.1 KB - Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 14 - Forks: 5
smsaladi/genome_size_vs_protein_count
Shiny app that plots NCBI genomes size versus protein count
Language: R - Size: 17.6 KB - Last synced at: over 1 year ago - Pushed at: over 6 years ago - Stars: 5 - Forks: 1
alejandrorgijon/a_genomic_perspective_2022
Sup. Table 1 from Rodríguez-Gijón and Nuy et al., 2022 (Front. in Microbiology)
Size: 6.66 MB - Last synced at: almost 2 years ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0
pbentkowski/GenomeSizeEvolution
Modelling evolution of genome size in prokaryotes in response to changes in their abiotic environment
Language: Python - Size: 3.46 MB - Last synced at: almost 2 years ago - Pushed at: over 7 years ago - Stars: 1 - Forks: 1
mbhall88/MemoryUnits
Python objects for dealing with metric units and memory, file, and genome sizes 💾
Language: Python - Size: 30.3 KB - Last synced at: 6 days ago - Pushed at: about 1 year ago - Stars: 7 - Forks: 1
hannesbecher/genome-size-variation Fork of Jacob-Sampson/genome-size-variation
Investigating genome size variation with k-mers
Language: R - Size: 39.2 MB - Last synced at: about 2 years ago - Pushed at: almost 3 years ago - Stars: 1 - Forks: 0