GitHub topics: mhc-binding-prediction
nf-core/epitopeprediction
A bioinformatics best-practice analysis pipeline for epitope prediction and annotation
Language: Nextflow - Size: 4.79 MB - Last synced at: 2 days ago - Pushed at: 2 days ago - Stars: 44 - Forks: 24

LucasDedieu/MHC1-Binding
Build a classifier that predicts if a given peptide will be presented by a specific MHC1 protein.
Language: Jupyter Notebook - Size: 766 KB - Last synced at: about 1 month ago - Pushed at: 8 months ago - Stars: 0 - Forks: 0

DABAKER165/pepMeld
Peptide Microarray Workflow. Python, open-source
Language: Python - Size: 331 KB - Last synced at: about 1 year ago - Pushed at: almost 2 years ago - Stars: 3 - Forks: 1

nstrodt/USMPep
Major Histocompatibility Complex (MHC) Binding Affinity Prediction
Language: Python - Size: 29.6 MB - Last synced at: over 1 year ago - Pushed at: about 4 years ago - Stars: 8 - Forks: 6

GfellerLab/MixMHC2pred
HLA-II ligand predictor.
Language: C++ - Size: 20.9 MB - Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 27 - Forks: 10

artyomovlab/hmmhc
MHC class II binding prediction
Language: Python - Size: 38.1 KB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 13 - Forks: 2

raghavagps/hlancpred
A method for predicting promiscuous non-classical HLA binding sites in an antigen
Language: Python - Size: 20.6 MB - Last synced at: 23 days ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 0

TRON-Bioinformatics/omicron-analysis
Analysis code, data and figures on the omicron MHC binding paper
Language: Jupyter Notebook - Size: 128 MB - Last synced at: almost 2 years ago - Pushed at: about 3 years ago - Stars: 2 - Forks: 1

ryanquinnnelson/CMU-02750-Peptide-Design-using-Bayesian-Optimization
Spring 2021 - Automation of Scientific Research - course project
Language: Jupyter Notebook - Size: 7.17 MB - Last synced at: about 2 years ago - Pushed at: over 3 years ago - Stars: 2 - Forks: 1

ryanquinnnelson/CMU-02718-SARS-CoV2-Vaccine-Design
Fall 2020 - Computational Medicine - course project
Language: Jupyter Notebook - Size: 12.1 MB - Last synced at: about 2 years ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 1

JohanYe/MHC
Repository experimenting with predicting binding affinities inspired by DeepLigand
Language: Python - Size: 74.6 MB - Last synced at: almost 2 years ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0
