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GitHub topics: mhc-binding-prediction

nf-core/epitopeprediction

A bioinformatics best-practice analysis pipeline for epitope prediction and annotation

Language: Nextflow - Size: 4.79 MB - Last synced at: 2 days ago - Pushed at: 2 days ago - Stars: 44 - Forks: 24

LucasDedieu/MHC1-Binding

Build a classifier that predicts if a given peptide will be presented by a specific MHC1 protein.

Language: Jupyter Notebook - Size: 766 KB - Last synced at: about 1 month ago - Pushed at: 8 months ago - Stars: 0 - Forks: 0

DABAKER165/pepMeld

Peptide Microarray Workflow. Python, open-source

Language: Python - Size: 331 KB - Last synced at: about 1 year ago - Pushed at: almost 2 years ago - Stars: 3 - Forks: 1

nstrodt/USMPep

Major Histocompatibility Complex (MHC) Binding Affinity Prediction

Language: Python - Size: 29.6 MB - Last synced at: over 1 year ago - Pushed at: about 4 years ago - Stars: 8 - Forks: 6

GfellerLab/MixMHC2pred

HLA-II ligand predictor.

Language: C++ - Size: 20.9 MB - Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 27 - Forks: 10

artyomovlab/hmmhc

MHC class II binding prediction

Language: Python - Size: 38.1 KB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 13 - Forks: 2

raghavagps/hlancpred

A method for predicting promiscuous non-classical HLA binding sites in an antigen

Language: Python - Size: 20.6 MB - Last synced at: 23 days ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 0

TRON-Bioinformatics/omicron-analysis

Analysis code, data and figures on the omicron MHC binding paper

Language: Jupyter Notebook - Size: 128 MB - Last synced at: almost 2 years ago - Pushed at: about 3 years ago - Stars: 2 - Forks: 1

ryanquinnnelson/CMU-02750-Peptide-Design-using-Bayesian-Optimization

Spring 2021 - Automation of Scientific Research - course project

Language: Jupyter Notebook - Size: 7.17 MB - Last synced at: about 2 years ago - Pushed at: over 3 years ago - Stars: 2 - Forks: 1

ryanquinnnelson/CMU-02718-SARS-CoV2-Vaccine-Design

Fall 2020 - Computational Medicine - course project

Language: Jupyter Notebook - Size: 12.1 MB - Last synced at: about 2 years ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 1

JohanYe/MHC

Repository experimenting with predicting binding affinities inspired by DeepLigand

Language: Python - Size: 74.6 MB - Last synced at: almost 2 years ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0