GitHub topics: microscope
PlanktoScope/PlanktoScope
Open and Affordable Quantitative Imaging Platform
Language: Python - Size: 1.13 GB - Last synced at: 5 days ago - Pushed at: 5 days ago - Stars: 69 - Forks: 25
zabertech/zaber-examples
Zaber Community Code Examples
Language: Python - Size: 120 MB - Last synced at: 5 days ago - Pushed at: 6 days ago - Stars: 17 - Forks: 8
rwb27/openflexure_microscope
This repository has now moved to GitLab.com/openflexure/openflexure-microscope
Language: OpenSCAD - Size: 548 MB - Last synced at: 15 days ago - Pushed at: almost 6 years ago - Stars: 251 - Forks: 57
samowitsch/raspberry-pi-hq-microscope
Adpater pcb between Raspberry Pi 3A+ and RPI HQ camera to build an 180x microscope
Language: Python - Size: 15.9 MB - Last synced at: 29 days ago - Pushed at: 29 days ago - Stars: 5 - Forks: 1
openMLA/Medjed
Maskless photolithography system targeting 5um resolution. Open hardware design.
Language: Python - Size: 561 KB - Last synced at: 25 days ago - Pushed at: about 1 year ago - Stars: 20 - Forks: 2
MAILFERT-Sebastien/LABVIEW-Nikon-Ti2-microscope-control
[LABVIEW] Control of Nikon Ti2 microscopes
Language: LabVIEW - Size: 42.4 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 2 - Forks: 0
python-microscope/microscope
Python library for control of microscope devices, supporting hardware triggers and distribution of devices over the network for performance and flexibility.
Language: Python - Size: 1.36 MB - Last synced at: 10 days ago - Pushed at: 8 months ago - Stars: 77 - Forks: 42
anfractuosity/cncmicroscopy
Controlling a Grbl controller based CNC machine for the purposes of microscopy
Language: Python - Size: 10.8 MB - Last synced at: 11 days ago - Pushed at: 7 months ago - Stars: 5 - Forks: 0
Gurdon-Super-Res-Lab/Microscope-Control
Modular microscope control in LabView.
Language: MATLAB - Size: 289 MB - Last synced at: 4 days ago - Pushed at: about 1 month ago - Stars: 13 - Forks: 9
3dem/relion
Image-processing software for cryo-electron microscopy
Language: C++ - Size: 58.2 MB - Last synced at: about 2 months ago - Pushed at: 3 months ago - Stars: 465 - Forks: 205
BiologyTools/BioImager
A .NET microscopy imaging application based on Bio library. Supports various microscopes by using imported libraries & GUI automation. Supports XInput game controllers to move stage, take images, run ImageJ macros on images or Bio C# scripts.
Language: C# - Size: 73.5 MB - Last synced at: 18 days ago - Pushed at: 3 months ago - Stars: 17 - Forks: 5
henkrijneveld/Microscope-PiCam
Use the Raspberry PI HQ Camera with a (gemmological) microscope. Fully interactive vue based. Designed by a Gemmologist :)
Language: JavaScript - Size: 11.7 MB - Last synced at: 14 days ago - Pushed at: about 2 years ago - Stars: 12 - Forks: 0
melahn/manuals
User Manuals, Instruction Sheets and Guides
Size: 153 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0
dmcooller/infuzoria
Application that helps to work with images taken under a microscope
Language: Python - Size: 559 KB - Last synced at: 3 days ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0
linyangchen/microscopy
CAD files of self-designed optomechanical components
Size: 589 KB - Last synced at: 13 days ago - Pushed at: 13 days ago - Stars: 1 - Forks: 1
melchisedech333/laser-scanning-microscopy
🧪 Reproducing the concept of Confocal Laser Scanning Microscope. Using Arduino and easily found materials. Generating images in Grayscale just for fun.
Language: PHP - Size: 4.39 MB - Last synced at: 11 days ago - Pushed at: over 2 years ago - Stars: 5 - Forks: 1
solaranamnesis/ottohahn
Public Domain works by Otto Hahn (1828–1904)
Language: TeX - Size: 7.04 MB - Last synced at: 2 months ago - Pushed at: 4 months ago - Stars: 0 - Forks: 0
openUC2/UC2-GIT
Respository for Open-Science modular microscope system.
Language: Jupyter Notebook - Size: 2.3 GB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 465 - Forks: 69
solaranamnesis/solaranamnesis.github.io
Static Site
Language: HTML - Size: 899 MB - Last synced at: 16 days ago - Pushed at: 5 months ago - Stars: 0 - Forks: 0
hunterjsb/cellar
Advanced Microscopy Imaging Used in Medical Research
Language: Python - Size: 47.9 KB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 1 - Forks: 0
junian/AutoKams
Automatic Image Capture Through Computer Attached Cameras
Language: C# - Size: 340 KB - Last synced at: 7 days ago - Pushed at: 6 months ago - Stars: 1 - Forks: 3
nvladimus/kekse
Rapid GUI building for instrument control (PyQt5 based)
Language: Python - Size: 107 KB - Last synced at: 19 days ago - Pushed at: almost 3 years ago - Stars: 8 - Forks: 1
nsfm/noskop
CNC microscopy in the browser
Language: TypeScript - Size: 3.59 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 2 - Forks: 0
mmalecki/rapiscope
Rack and pinion-adjustable, rapidly 3D-printable, Raspberry Pi-based digital microscope for soldering
Language: OpenSCAD - Size: 11.1 MB - Last synced at: 6 months ago - Pushed at: almost 2 years ago - Stars: 6 - Forks: 0
danilexn/deCU
Fluorescence microscopy deconvolution scripts, using CUDA. DeltaVision and Zeiss Spinning-Disk formats supported.
Language: Python - Size: 150 MB - Last synced at: 12 months ago - Pushed at: 12 months ago - Stars: 0 - Forks: 0
AmirSTORMic/PiFocus
This is a repository for the development of an active focus stabilisation.
Language: Python - Size: 236 KB - Last synced at: 12 months ago - Pushed at: 12 months ago - Stars: 0 - Forks: 0
isyedjr/OS-M-Mk-1
Open Source 3D Microscope prototype with >150x zoom, built out of hobby electronics and old DVD drives.
Language: C++ - Size: 16 MB - Last synced at: about 1 year ago - Pushed at: almost 4 years ago - Stars: 2 - Forks: 0
JimKnopfIoT/Diffuser-for-Microscope-Ringlight
3D-printable Diffuser for Microscope Ringlight (Created with Rhino 6)
Size: 20.4 MB - Last synced at: about 1 year ago - Pushed at: almost 5 years ago - Stars: 0 - Forks: 0
koendv/xy-stage
mechanical stage
Language: C++ - Size: 13.4 MB - Last synced at: about 1 year ago - Pushed at: over 1 year ago - Stars: 5 - Forks: 0
joergmlpts/usb-camera
Python code to connect a microscope, or another USB camera, to Linux and show its video stream.
Language: Python - Size: 557 KB - Last synced at: 11 months ago - Pushed at: over 2 years ago - Stars: 7 - Forks: 4
prakashlab/octopi-driver-board 📦
Driver electronics for the Octopi and Squid microscope families.
Language: C++ - Size: 210 MB - Last synced at: 3 days ago - Pushed at: almost 4 years ago - Stars: 6 - Forks: 5
solaranamnesis/Karl-Wilhelm-von-Gumbel
Public Domain works by Karl Wilhelm von Gümbel (1823 - 1898)
Language: TeX - Size: 1.41 MB - Last synced at: 2 months ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 0
jurgenizer/slidedb 📦
A virtual slide viewer (virtual microscope) for extremely high-resolution histopathology images. Made with Python, Flask and Leaflet.
Language: HTML - Size: 664 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 5 - Forks: 1
scchn/scchn
Size: 2.19 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0
merijndewit/Filameter
A cool (and pretty accurate) way of measuring filament with a camera!
Language: Python - Size: 76.2 KB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 0
jonatanalvelid/ImSwitch-etSTED
A version of ImSwitch used for event-triggered STED imaging.
Language: Python - Size: 24.2 MB - Last synced at: over 1 year ago - Pushed at: about 3 years ago - Stars: 0 - Forks: 0
AnnaFrances8/JOIN-Software-v1
Microscope image stitiching program
Language: Python - Size: 963 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 0
jherkenhoff/STM
DIY scanning tunneling microscope (STM)
Language: Jupyter Notebook - Size: 43.8 MB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 33 - Forks: 6
BiologyTools/MicroscopeConsole
Microscope controller currently for Zeiss®
Language: C# - Size: 38.1 KB - Last synced at: 28 days ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 1
hadim/mm_scripts
A collection of scripts related to Micro-Manager.
Language: Shell - Size: 13.7 KB - Last synced at: 3 days ago - Pushed at: about 6 years ago - Stars: 3 - Forks: 4
NOBIC-NTU/Brillouin-microscope
Modular Brillouin scattering microscope design
Size: 34.5 MB - Last synced at: almost 2 years ago - Pushed at: over 4 years ago - Stars: 2 - Forks: 1
raacampbell/openstage
Arduino-based microscope stage controller
Language: C++ - Size: 13.1 MB - Last synced at: over 1 year ago - Pushed at: about 4 years ago - Stars: 37 - Forks: 15
MicroWeaR/MicroWeaR
MicroWear is a tool to Examine and Score Microwear Scars in a Semi-Automatic Way
Language: R - Size: 4.14 MB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0
CGrassin/microscope_led_light_circuit
A dimming LED circuit designed for optical microscopes.
Language: HTML - Size: 1.61 MB - Last synced at: about 2 months ago - Pushed at: about 2 years ago - Stars: 1 - Forks: 0
Xcap-App/XcapKit
🎨 Xcap drawing toolkit.
Language: Swift - Size: 144 KB - Last synced at: about 2 years ago - Pushed at: about 2 years ago - Stars: 1 - Forks: 0
jarmond/celldb 📦
Matlab front-end for cell analysis management system backed by SQL DB
Language: MATLAB - Size: 61.5 KB - Last synced at: about 2 years ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0
ggirelli/SpectraScope 📦
Interactive interface to visualize spectra and filter sets for any microscope. Easily customizable.
Language: JavaScript - Size: 5.17 MB - Last synced at: about 1 year ago - Pushed at: almost 5 years ago - Stars: 1 - Forks: 0
pattarini/CAD
Designs with OpenSCAD, mostly for optics and microscopes
Language: OpenSCAD - Size: 256 KB - Last synced at: about 2 years ago - Pushed at: over 3 years ago - Stars: 1 - Forks: 0
tpollina/PlanktoScope Fork of PlanktoScope/PlanktoScope
Low-cost fluidic microscope for citizen science
Language: HTML - Size: 413 MB - Last synced at: 9 months ago - Pushed at: over 1 year ago - Stars: 8 - Forks: 0
biotexturas/HomeScope
An open microscope with a robotized XYZ stage :microscope:
Language: C - Size: 27.5 MB - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 3 - Forks: 0
zeus2198/e-gun-microscope-3d-simulation
Electron gun and microscope 3d simulation written on top of Babylon.js
Language: JavaScript - Size: 1.75 MB - Last synced at: about 2 years ago - Pushed at: over 3 years ago - Stars: 3 - Forks: 2
pavikonda/RaspberryPi_FPScope
Fourier ptychographic microscope based on a Raspberry Pi. Publication: 10.1038/s41598-019-43845-9
Language: OpenSCAD - Size: 1.16 MB - Last synced at: about 2 years ago - Pushed at: about 5 years ago - Stars: 6 - Forks: 2
Glasgow-ICG/3d-printed-modular-microscope
A 3D-printed, modular microscope for demonstrating light-sheet microscopy (and more) to public audiences
Language: OpenSCAD - Size: 6.62 MB - Last synced at: almost 2 years ago - Pushed at: almost 5 years ago - Stars: 2 - Forks: 0
Tristan-Anderson/CompucentricRotation
For an SEM without a compucentric stage, upon stage-rotation the coordinate system changes. This application resolves where a point in SEM-coordinates before rotation will be after stage-rotation.
Language: HTML - Size: 11 MB - Last synced at: 5 months ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0
leoscholl/pi-macroscope
digital operating microscope (or inspection microscope) using a raspberry pi and hq camera
Language: Python - Size: 371 KB - Last synced at: about 2 years ago - Pushed at: about 2 years ago - Stars: 1 - Forks: 0
JanRibasGarriga/WhoIsWho
WhoIsWho is Google Colab-based tool that aims to classify cells based on features related to their nuclei and their neighbours.
Language: Jupyter Notebook - Size: 1.63 MB - Last synced at: about 2 years ago - Pushed at: almost 3 years ago - Stars: 0 - Forks: 0
UniversalScientificTechnologies/MICROSCOPE01
Electronics for nuclear emulsion plate analysis microscope
Language: G-code - Size: 55.1 MB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 1 - Forks: 1
solaranamnesis/Gustav-Rose
Public Domain works by Gustav Rose (1798 – 1873)
Language: TeX - Size: 1.87 MB - Last synced at: 2 months ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0
Kgotso-Koete/Araba
A Q&A site for African SME/Startup founders to get meaningful advice in running their businesses
Language: JavaScript - Size: 28.7 MB - Last synced at: 2 months ago - Pushed at: over 3 years ago - Stars: 2 - Forks: 1
FFY00/scopetek-re
ScopeTek microscope cameras reverse engineering
Language: Python - Size: 12.7 KB - Last synced at: 12 days ago - Pushed at: 22 days ago - Stars: 1 - Forks: 0
tlnagy/MMConfigs
Micromanager configs for our various scopes
Size: 89.8 KB - Last synced at: about 2 months ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0
vazirilab/neurolabware_scanbox_utils_docs
Collected code, issues and wisdom on the Neurolabware Mesoscope and ScanBox software
Language: MATLAB - Size: 9.04 MB - Last synced at: 8 months ago - Pushed at: almost 5 years ago - Stars: 0 - Forks: 0
ezefranca/py-microscope
Um microscópio construido a partir de uma webcam USB e a visualização feita com Python.
Language: Python - Size: 33.2 KB - Last synced at: 25 days ago - Pushed at: almost 7 years ago - Stars: 1 - Forks: 0
ykjawale/3DPFM
3D printed focussing mechanism (3DPFM) for portable ball-lens microscope
Language: G-code - Size: 2.01 MB - Last synced at: about 2 years ago - Pushed at: over 5 years ago - Stars: 0 - Forks: 1
halfpastseven/3DMicroscope
A program that transforms multiple images at different focus levels into one image and generate a 3D profile
Language: C++ - Size: 17.6 MB - Last synced at: about 2 years ago - Pushed at: about 8 years ago - Stars: 1 - Forks: 0
mohakpatel/ImageCleaning
Deep learning model to remove noise from microscope images
Language: Jupyter Notebook - Size: 20.1 MB - Last synced at: about 2 years ago - Pushed at: over 4 years ago - Stars: 1 - Forks: 2
realkushagrakhare/ZeissHackathonDemo
The repository contains the demo code for the Zeiss Hackathon 2017 and was completed in collaboration with Utkarsh Agrawal, Pranav Aggarwal, Pranav Kedia and Rachit Jain
Language: C# - Size: 5.5 MB - Last synced at: about 1 month ago - Pushed at: about 7 years ago - Stars: 1 - Forks: 0
