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GitHub topics: nextflow-dsl2

mskcc-omics-workflows/modules

A repository for hosting Nextflow DSL2 module files containing tool-specific process definitions and their associated documentation for MSKCC

Language: Python - Size: 2.1 MB - Last synced at: 5 days ago - Pushed at: 6 days ago - Stars: 10 - Forks: 6

evotools/nf-LO

A Nextflow workflow to generate lift over files for any pair of genomes

Language: Nextflow - Size: 19.4 MB - Last synced at: 21 days ago - Pushed at: 21 days ago - Stars: 64 - Forks: 10

cnr-ibba/nf-resequencing-mem

Nextflow resequencing pipeline with bwa-mem and freebayes

Language: Nextflow - Size: 2.66 MB - Last synced at: 10 days ago - Pushed at: about 1 month ago - Stars: 0 - Forks: 0

telatin/nextflow-example

A simple DSL2 workflow: tutorial

Language: Nextflow - Size: 41.1 MB - Last synced at: about 2 months ago - Pushed at: about 1 year ago - Stars: 25 - Forks: 8

nf-core/sublime Fork of peterk87/sublime-nextflow

Nextflow workflow syntax highlighting and snippets for Sublime Text 4

Language: Python - Size: 654 KB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 6 - Forks: 4

peterk87/sublime-nextflow

Nextflow workflow syntax highlighting and snippets for Sublime Text 4

Language: Python - Size: 654 KB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 24 - Forks: 7

JBris/nextflow-tutorials

Working through NextFlow tutorials. See https://github.com/nextflow-io/training

Language: HTML - Size: 2.57 MB - Last synced at: about 2 months ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 0

GiantSpaceRobot/tsRNAsearch

Nextflow DSL2 tRNA and ncRNA fragment identification pipeline for small RNA-seq data

Language: R - Size: 59.7 MB - Last synced at: over 1 year ago - Pushed at: almost 3 years ago - Stars: 6 - Forks: 3

ajandria/futuriandge

This is a personal project focused on creating uniformal pipeline for processing RNA-seq data with the end goal to create a .Rdata object which can be imported into R/Shiny app for downstream analysis and hypothesis testing.

Language: Groovy - Size: 2.86 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 0