Ecosyste.ms: Repos
An open API service providing repository metadata for many open source software ecosystems.
GitHub topics: structure-variation
Shuhua-Group/SVanalysis_STARProtocols
A protocol for applying low-coverage whole-genome sequencing data in structure variation studies
Language: Shell - Size: 21.6 MB - Last synced: 3 months ago - Pushed: 3 months ago - Stars: 1 - Forks: 0
Archieyoung/SVAN
A Structure Variantion Annotation Tool
Language: Python - Size: 23.4 KB - Last synced: 7 months ago - Pushed: over 5 years ago - Stars: 2 - Forks: 0
orangeSi/Grainbow
show the genome structure variation or assembly error by pair-end or mate-pair reads
Language: Perl - Size: 6.1 MB - Last synced: 7 months ago - Pushed: over 5 years ago - Stars: 0 - Forks: 0
orangeSi/GSSplayground
Lightweight single-html-file-based Genome Segments playground for Visualize genome features cluster(gene arrow map or other features), add synteny among genome fragments or add crosslink among features, add short(PE/MP)/long reads(pacbio or nanopore) mapping or snpindel in vcf(not support complex sv yet), support all CIGAR of sam alignment, directly modify almost all features in Chrome by click the feature
Language: HTML - Size: 148 MB - Last synced: 4 months ago - Pushed: almost 4 years ago - Stars: 27 - Forks: 7
geniusphil/run-annotsv
Annotation structure variant
Language: Shell - Size: 1000 Bytes - Last synced: about 1 year ago - Pushed: almost 5 years ago - Stars: 0 - Forks: 1
