Daviiap/sev-guest_device_mock

Mock implementation of the SEV-SNP processor firmware interface

Language: C - Size: 878 KB - Last synced: 1 day ago - Pushed: 2 days ago - Stars: 3 - Forks: 0

zhengxwen/HIBAG

R package – HLA Genotype Imputation with Attribute Bagging (development version only)

Language: C++ - Size: 40.3 MB - Last synced: 1 day ago - Pushed: 2 days ago - Stars: 26 - Forks: 7

wshuai294/PStrain

Pstrain profiles strains in metagenomics data. It infers strain abundance and genotype for each species. Also, it has a single species mode; where given a BAM and VCF, it can phase the variants for any species.

Language: Shell - Size: 98.4 MB - Last synced: 3 days ago - Pushed: 3 days ago - Stars: 8 - Forks: 2

intel/MultiArchUefiPkg

Multi-Architecture UEFI Environment Driver

Language: C - Size: 5.87 MB - Last synced: 3 days ago - Pushed: 3 days ago - Stars: 47 - Forks: 10

kalilamali/SARS-CoV-2_Illumina_pipeline

Step-by-step approach in the analysis of SARS-CoV-2 cDNA from raw reads using fastqc, trimmomatic, bwa, vcftools.

Size: 3.91 KB - Last synced: 12 days ago - Pushed: almost 2 years ago - Stars: 1 - Forks: 0

zhengxwen/SeqArray

Data management of large-scale whole-genome sequence variant calls (Development version only)

Language: C++ - Size: 9.7 MB - Last synced: 13 days ago - Pushed: 13 days ago - Stars: 42 - Forks: 10

ramiromagno/gwasrapidd

gwasrapidd: an R package to query, download and wrangle GWAS Catalog data

Language: R - Size: 19.9 MB - Last synced: 9 days ago - Pushed: 5 months ago - Stars: 82 - Forks: 13

ncbi/icn3d

web-based protein structure viewer and analysis tool interactively or in batch mode

Language: JavaScript - Size: 384 MB - Last synced: 14 days ago - Pushed: 14 days ago - Stars: 143 - Forks: 41

CDCgov/mycosnp-nf

CDCgov/mycosnp-nf

Language: Nextflow - Size: 68.7 MB - Last synced: 8 days ago - Pushed: 3 months ago - Stars: 31 - Forks: 29

JiscaH/sequoia

R package for pedigree inference based on SNP data

Language: Fortran - Size: 81.9 MB - Last synced: 16 days ago - Pushed: 16 days ago - Stars: 23 - Forks: 6

mkpython3/Mutation-Simulator

A tool for simulating random mutations in any genome

Language: Python - Size: 4.47 MB - Last synced: 3 days ago - Pushed: 3 months ago - Stars: 32 - Forks: 6

Daemon2017/yFarseerWeb

Web-приложение для отрисовки данных, обработанных с помощью yMapper'а.

Language: JavaScript - Size: 788 KB - Last synced: 18 days ago - Pushed: 19 days ago - Stars: 1 - Forks: 0

salvadorlab/mbovpan

Mbovpan is a nextflow bioinformatic pipeline for Mycobacterium bovis pangenome analysis. The goal of Mbovpan is to help researchers to study the M. bovis pangenome in an automatic and easy way.

Language: Nextflow - Size: 389 MB - Last synced: 17 days ago - Pushed: 17 days ago - Stars: 4 - Forks: 0

Sydney-Informatics-Hub/GermlineShortV_biovalidation

Workflow for biological validation of germline SNP and indel variant datasets.

Language: Shell - Size: 143 KB - Last synced: 24 days ago - Pushed: almost 2 years ago - Stars: 0 - Forks: 0

sauloal/introgressionbrowser2

Introgression Browser v2.0 - Complete rewrite from the group up of Introgression Browser

Language: JavaScript - Size: 779 KB - Last synced: 24 days ago - Pushed: over 3 years ago - Stars: 0 - Forks: 0

GoliczGenomeLab/haploMAGIC

Phasing, haplotype reconstruction and crossover detection with single-nucleotide polymorphism data from multiparental populations.

Language: R - Size: 176 KB - Last synced: 3 months ago - Pushed: 3 months ago - Stars: 1 - Forks: 0

USDA-VS/vSNP

vSNP -- validate SNPs

Language: Python - Size: 68.5 MB - Last synced: 28 days ago - Pushed: over 1 year ago - Stars: 18 - Forks: 12

neradp/SNPClient

Language: PHP - Size: 557 KB - Last synced: about 1 month ago - Pushed: over 5 years ago - Stars: 0 - Forks: 0

zhengxwen/SNPRelate

R package: parallel computing toolset for relatedness and principal component analysis of SNP data (Development version only)

Language: C++ - Size: 17.9 MB - Last synced: 29 days ago - Pushed: 29 days ago - Stars: 96 - Forks: 25

YaoLab-Bioinfo/MaizeSNPDB

A comprehensive database for efficient retrieve and analysis of SNPs among 1210 maize lines

Language: R - Size: 1.65 GB - Last synced: about 2 months ago - Pushed: over 1 year ago - Stars: 12 - Forks: 4

oncogenetics/LocusExplorer

An interactive graphical illustration of genetic associations and their biological context

Language: R - Size: 194 MB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 13 - Forks: 15

mbhall88/psdm

Compute a pairwise SNP distance matrix from one or two alignment(s)

Language: Rust - Size: 337 KB - Last synced: 1 day ago - Pushed: almost 2 years ago - Stars: 16 - Forks: 1

zhengxwen/HIBAG.gpu

GPU-based implementation for the HLA genotype imputation method (HIBAG)

Language: C++ - Size: 285 KB - Last synced: about 2 months ago - Pushed: 4 months ago - Stars: 1 - Forks: 1

MichaelSebero/Genetic-Trait-Detector

This python script detects known traits in raw human genetic data.

Language: Python - Size: 79.1 KB - Last synced: 2 months ago - Pushed: 2 months ago - Stars: 31 - Forks: 1

kkonowalik/Achillea

analizy dotyczące danych ze studenckiego projektu SKN Biologów Roślin "Mlecz" dotyczącego występowania Achillea millefolium w Karkonoszach wzdłuż gradientu wysokościowego

Size: 22.5 KB - Last synced: 2 months ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0

PlatonB/ld-tools

ld-tools: toolkit for linkage disequilibrium calculation designed to work locally

Language: Python - Size: 1.87 MB - Last synced: 2 months ago - Pushed: 2 months ago - Stars: 2 - Forks: 0

roman-tremmel/ggfastman

Fast manhattenplots using ggplot2

Language: R - Size: 2.54 MB - Last synced: 3 months ago - Pushed: 3 months ago - Stars: 6 - Forks: 1

gtonkinhill/pairsnp

A set of scripts for calculating pairwise SNP distance

Size: 1.99 MB - Last synced: 19 days ago - Pushed: over 1 year ago - Stars: 34 - Forks: 6

inzilico/phase-01

Scripts to automate the phasing with several tools

Language: Python - Size: 16.6 KB - Last synced: 3 months ago - Pushed: 3 months ago - Stars: 0 - Forks: 0

petersm3/buildtassel3

Wrapper scripts for TASSEL (Trait Analysis by aSSociation, Evolution and Linkage) and UNEAK (Universal Network Enabled Analysis Kit) v3.0 Genotyping by Sequencing (GBS) analysis pipelines

Language: Shell - Size: 254 KB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 0 - Forks: 0

daormar/snptools

Package to work with single nucleotide polymorpishms (SNPs)

Language: M4 - Size: 1.98 MB - Last synced: 5 months ago - Pushed: about 2 years ago - Stars: 3 - Forks: 0

admy55/CoreSNP

Select minimal core SNPs from vcf file

Language: Python - Size: 19.4 MB - Last synced: 6 months ago - Pushed: 6 months ago - Stars: 0 - Forks: 0

hdg204/Rdna-nexus

Functions to analyse UK Biobank genetic data directly from DNA Nexus' RStudio Workbench

Language: R - Size: 66.4 KB - Last synced: about 2 months ago - Pushed: 6 months ago - Stars: 5 - Forks: 0

alinja/snipsa

Tools for analyzing raw DNA test data files. Shows Y chromosome and mitochondrial mtDNA haplogroups. LGPLv3 - use freely but share improvements.

Language: Python - Size: 4.71 MB - Last synced: 6 months ago - Pushed: 10 months ago - Stars: 8 - Forks: 3

wennj/pileupReformater

Convert output from Samtools pileup into a matrix.

Language: Java - Size: 25.4 KB - Last synced: 6 months ago - Pushed: 6 months ago - Stars: 0 - Forks: 0

FLinT3/SNParser

This is a small script can help to annotate your SNPs. The program take on input your SNP-id from the VCF file and generate a report based on SNPedia (https://www.snpedia.com/) data.

Language: Jupyter Notebook - Size: 68.4 KB - Last synced: 7 months ago - Pushed: 7 months ago - Stars: 0 - Forks: 0

solgenomics/SNPbinner

SNPbinner is a utility for the generation of genotype crossover points and binmaps based on SNP data across recombinant inbred lines.

Language: Python - Size: 7.22 MB - Last synced: 7 months ago - Pushed: about 5 years ago - Stars: 24 - Forks: 18

UDC-GAC/mpi3snp

GWAS third-level epistatic search tool for cluster architectures

Language: C++ - Size: 552 KB - Last synced: 7 months ago - Pushed: about 4 years ago - Stars: 2 - Forks: 0

snaketron/genphen

Tool for genome wide association studies with Bayesian inference and statistical learning

Language: R - Size: 49.5 MB - Last synced: 7 months ago - Pushed: over 2 years ago - Stars: 4 - Forks: 2

JoKuebler/SNPTools

A command line tool to annotate SNPs including p-value estimation about there clinical significance

Language: Java - Size: 1.13 MB - Last synced: 7 months ago - Pushed: almost 7 years ago - Stars: 1 - Forks: 0

IFB-ElixirFr/GFLS_SNiPlay

Galaxy For Life Science - SNiPlay

Language: C++ - Size: 57.7 MB - Last synced: 7 months ago - Pushed: over 5 years ago - Stars: 2 - Forks: 0

gustaveroussy/wes-snp-bwa-mutect2-annovar

Reference pipeline for somatic SNP detection using BWA for mapping, Mutect2 for calling and Annovar for annotation

Size: 14.6 KB - Last synced: 7 months ago - Pushed: almost 5 years ago - Stars: 1 - Forks: 0

rojaff/LanGen_pipeline

Suit of R-scripts to perform landscape genomic analyses

Language: R - Size: 157 KB - Last synced: 7 months ago - Pushed: almost 4 years ago - Stars: 8 - Forks: 6

camult/GDmat

Calculates Additive and Dominance Relationship Matrices

Language: C++ - Size: 21.5 KB - Last synced: 7 months ago - Pushed: over 6 years ago - Stars: 3 - Forks: 0

shumengjun/TASSEL_GBS_V2

Calling SNPs using TASSEL GBS V2 pipeline for ponderosa pine using the reference genome of loblolly pine

Language: Shell - Size: 51.8 KB - Last synced: 7 months ago - Pushed: about 4 years ago - Stars: 1 - Forks: 0

dhimmel/gwas-catalog

Extracting disease-gene associations from the GWAS Catalog

Language: Jupyter Notebook - Size: 18.7 MB - Last synced: 8 days ago - Pushed: about 8 years ago - Stars: 2 - Forks: 6

orangeSi/GSSplayground

Lightweight single-html-file-based Genome Segments playground for Visualize genome features cluster(gene arrow map or other features), add synteny among genome fragments or add crosslink among features, add short(PE/MP)/long reads(pacbio or nanopore) mapping or snpindel in vcf(not support complex sv yet), support all CIGAR of sam alignment, directly modify almost all features in Chrome by click the feature

Language: HTML - Size: 148 MB - Last synced: 4 months ago - Pushed: almost 4 years ago - Stars: 27 - Forks: 7

shpyang/PAIR

SNP array data normalization

Size: 11.7 KB - Last synced: 8 months ago - Pushed: over 4 years ago - Stars: 1 - Forks: 0

TC-Hewitt/MuTrigo

pipeline for mutant gene candidate discovery

Language: Python - Size: 81.1 KB - Last synced: 8 months ago - Pushed: almost 2 years ago - Stars: 2 - Forks: 0

sghignone/pilon

Docker based on bioconda distribution (v.1.23), with fixed memory issue

Language: Dockerfile - Size: 6.84 KB - Last synced: 9 months ago - Pushed: almost 4 years ago - Stars: 0 - Forks: 0

AgResearch/snpGBS

A simple bioinformatics workflow to identify single nucleotide polymorphism (SNP) from Genotyping-by-Sequencing (GBS) data.

Language: Jupyter Notebook - Size: 225 MB - Last synced: 9 months ago - Pushed: over 2 years ago - Stars: 1 - Forks: 3

y9c/mpileup

extract nucleotide/read counts at user specific loci from multiple bam files

Language: Rust - Size: 521 KB - Last synced: 9 months ago - Pushed: over 1 year ago - Stars: 1 - Forks: 0

jlanga/ttin_snps

Language: Python - Size: 35.5 MB - Last synced: 9 months ago - Pushed: almost 6 years ago - Stars: 0 - Forks: 2

maxim-k/PyVep

Python wrapper and web-server for Ensembl VEP

Language: Python - Size: 84 KB - Last synced: 9 months ago - Pushed: about 7 years ago - Stars: 0 - Forks: 0

seanharr11/snip_warehouse

Warehousing DbSNP's JSON Data into PostgreSQL

Language: Python - Size: 1.88 MB - Last synced: 9 months ago - Pushed: almost 6 years ago - Stars: 4 - Forks: 2

quartzbio/plinker_pkg 📦

plinker is a R package to interface PLINK over PLINK BED files.

Language: R - Size: 2.25 MB - Last synced: 9 months ago - Pushed: over 5 years ago - Stars: 1 - Forks: 0

ckorfmann/snp-counter

Counts all SNP mutations in .map file

Language: Python - Size: 64.5 KB - Last synced: 10 months ago - Pushed: about 3 years ago - Stars: 0 - Forks: 0

OrangePomeranian/Master_thesis

Analysis of SNPs that have the greatest impact of appearance of mammary gland tumour in dogs.

Language: R - Size: 202 KB - Last synced: 12 months ago - Pushed: 12 months ago - Stars: 1 - Forks: 0

AdamDS/23AndMeAndClinVar

Cross-reference 23andMe raw variant file with ClinVar

Language: Perl - Size: 4.88 KB - Last synced: 9 months ago - Pushed: over 6 years ago - Stars: 2 - Forks: 0

NCBI-Hackathons/ScrubSV

A QC pipeline for SVs calls based on coverage and SNP calls

Language: R - Size: 189 KB - Last synced: 24 days ago - Pushed: over 5 years ago - Stars: 5 - Forks: 0

Serg-Norseman/GKGenetix

Simple genetic data analysis for GEDKeeper

Language: C# - Size: 482 KB - Last synced: 5 months ago - Pushed: 5 months ago - Stars: 1 - Forks: 1

Endika/genome_report

Your genome report

Language: Python - Size: 18.7 MB - Last synced: 11 months ago - Pushed: about 3 years ago - Stars: 6 - Forks: 4

JiscaH/sequoia_notR

This Fortran program is the stand alone equivalent to the R package 'sequoia', and performs pedigree reconstruction from SNP data

Language: Fortran - Size: 3.22 MB - Last synced: 4 months ago - Pushed: 4 months ago - Stars: 0 - Forks: 1

KyriakosPsa/SNPop

An application package for the collection, visualization and small scale analysis of catalogued data regarding single nucleotide polymorphisms across populations.

Language: Python - Size: 3.3 MB - Last synced: about 1 year ago - Pushed: almost 2 years ago - Stars: 0 - Forks: 0

akiomiyao/ped

Polymorphic Edge Detection - An efficient polymorphism detector for NGS data

Language: Perl - Size: 12.5 MB - Last synced: about 6 hours ago - Pushed: about 8 hours ago - Stars: 4 - Forks: 2

nicolexxuu/SNPAAMapper-Python

A downstream variant annotation program that can effectively classify variants by region, predict amino acid change type, and prioritize mutation effects.

Language: CAP CDS - Size: 26.3 MB - Last synced: about 1 year ago - Pushed: over 1 year ago - Stars: 1 - Forks: 0

HuzeyfeAyaz/CRC_Prediction_with_Immune_SNP_Profiles Fork of itu-bioinformatics-database-lab/CRC_Prediction_with_Immune_SNP_Profiles

The goal of this analysis is to explore the machine learning-based automatic diagnosis of colorectal patients based on the single nucleotide polymorphisms (SNP). Such a computational approach may be used complementary to other diagnosis tools, such as, biopsy, CT scan, and MRI. Moreover, it may be used as a low-cost screening for colorectal cancers

Size: 0 Bytes - Last synced: about 1 year ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0

DKFZ-ODCF/SNVCallingWorkflow

The DKFZ-ODCF, formerly DKFZ/eilslabs SNV-Calling Workflow

Language: Python - Size: 925 KB - Last synced: 7 months ago - Pushed: 11 months ago - Stars: 7 - Forks: 4

KennethEnevoldsen/snip

A utility package handling Single Nucleotide polymorphism data in Python

Language: Python - Size: 22.4 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 0 - Forks: 0

georgiesamaha/ProbeRemap

Map SNP positions to a supplied reference assembly using BLAST. Filter results for best hit. Output in plink format.

Language: Python - Size: 118 KB - Last synced: about 1 year ago - Pushed: almost 2 years ago - Stars: 0 - Forks: 0

MH-Lee/gwas_data_preprocessing

SNP(VCF format) data preprocessing for GWAS disease prediction

Language: Python - Size: 20.5 KB - Last synced: about 1 year ago - Pushed: almost 2 years ago - Stars: 0 - Forks: 0

alibrahimzada/Colon-Cancer

Exploring the Supervised Learning Models to Automatically Diagnose Colon Cancer Patients based on their SNP Profiles

Language: Jupyter Notebook - Size: 22.2 MB - Last synced: about 1 year ago - Pushed: about 3 years ago - Stars: 0 - Forks: 2

2sh/discordant-snp-search

Search for discordant SNPs between child and parent 23andMe files

Language: Python - Size: 16.6 KB - Last synced: about 1 year ago - Pushed: about 2 years ago - Stars: 1 - Forks: 0

Sedictious/SnpParser.jl

Touchstone file parsing and visualizing in Julia

Language: Julia - Size: 66.4 KB - Last synced: about 19 hours ago - Pushed: about 2 years ago - Stars: 2 - Forks: 0

ipw012/RIVER

R package for RIVER (RNA-Informed Variant Effect on Regulation)

Language: R - Size: 2.79 MB - Last synced: 3 months ago - Pushed: about 4 years ago - Stars: 10 - Forks: 4

dhimmel/snplentiful

SNP abundance correlates with network degree

Language: Jupyter Notebook - Size: 175 MB - Last synced: 8 days ago - Pushed: almost 5 years ago - Stars: 7 - Forks: 1

ziul-bio/Variant_Call_sars-cov-2

A chamada de variantes envolve a identificação de polimorfismos de nucleotídeo único (SNPs) e pequenas inserções e deleções (indels) em dados de Sequenciamento de Nova Geração (NGS). Nesta pipeline descrevo a detecção de SNP para identificação de possíveis alterações de aminoácidos em proteínas virais.

Language: Shell - Size: 1.13 MB - Last synced: 11 months ago - Pushed: over 2 years ago - Stars: 0 - Forks: 0

adityatripathiiit/Image_Denoising

Python implementation of the Non Local Means algorithm for Image Denoising

Language: Jupyter Notebook - Size: 13.2 MB - Last synced: about 1 year ago - Pushed: over 2 years ago - Stars: 1 - Forks: 0

AmirHoseinSafari/Genotype-collector-and-SNP-dataset-creator

Collecting Genotypes from ENA and make their SNPs

Language: Python - Size: 40 KB - Last synced: about 1 year ago - Pushed: over 2 years ago - Stars: 5 - Forks: 0

AmirHoseinSafari/M.tuberculosis-dataset-for-drug-resistant

The SNP and gene datasets of M. Tuberculosis for drug resistance prediction.

Size: 40.9 MB - Last synced: about 1 year ago - Pushed: over 2 years ago - Stars: 1 - Forks: 1

Daemon2017/yMapper

Программа для построения карт таксономического разнообразия SNP Y-хромосомы на основе открытых данных.

Language: Python - Size: 151 KB - Last synced: about 1 year ago - Pushed: over 2 years ago - Stars: 0 - Forks: 1

Vvitali/DNAexplorer

DNA explorer - app for observing decrypted DNA-chains in digital format, app show information about single nucleotide polymorphisms, and provide a brief describtion - it may helps to determine if you have certain genetic predisposition to diseases, and show hidden information encoded in your DNA (your ancestries, phenotypes, predisposition to sport)

Language: HTML - Size: 43 KB - Last synced: about 1 year ago - Pushed: over 2 years ago - Stars: 1 - Forks: 0

waqasuddinkhan/MACARON-GenMed-LabEx

Multi-bAse Codon-Associated variant Re-annotatiON (MACARON)

Language: Python - Size: 121 KB - Last synced: 7 months ago - Pushed: almost 4 years ago - Stars: 7 - Forks: 3

NCBI-Hackathons/ExpressiVar

Language: Python - Size: 6.02 MB - Last synced: 24 days ago - Pushed: over 4 years ago - Stars: 2 - Forks: 1

chadlaing/feht

Predictive marker discovery for groups; binary data, genomic data (single nucleotide variants), arbitrary character data.

Language: Haskell - Size: 129 KB - Last synced: about 2 months ago - Pushed: almost 6 years ago - Stars: 4 - Forks: 2

Grelot/reserveBenefit--snpsdata_analysis

Codes i wrote for the paper "genomic resources for Mediterranean fishes"

Language: Shell - Size: 2.85 MB - Last synced: about 1 year ago - Pushed: over 3 years ago - Stars: 0 - Forks: 0

UDC-GAC/toxo

A library for calculating penetrance tables of any bivariate epistasis model.

Language: MATLAB - Size: 129 KB - Last synced: about 1 year ago - Pushed: over 3 years ago - Stars: 1 - Forks: 2

ValentinMarcon/docker-galaxy-sniplay

Galaxy container with the Sniplay workflow for exploration and large scale analyses of SNP polymorphisms (filtering, density, vcftools, diversity, linkage disequilibrium, population structure).

Language: CSS - Size: 607 KB - Last synced: about 1 year ago - Pushed: over 5 years ago - Stars: 2 - Forks: 0

ekaminuma/GTASSIST

GTASSIST: Objective evaluation measures of genetic marker selection in SNP genotyping (2008-02-05)

Language: Matlab - Size: 97.8 MB - Last synced: 7 months ago - Pushed: over 8 years ago - Stars: 0 - Forks: 0

prete/visual-genoma

Final project for Information Systems Engineering

Language: JavaScript - Size: 28.3 MB - Last synced: about 1 year ago - Pushed: about 5 years ago - Stars: 0 - Forks: 0

Grelot/seaConnect--dDocent

GBS workflow using dDocent. This was designed to process GBS data from SEACONNECT project.

Language: Shell - Size: 69.3 KB - Last synced: about 1 year ago - Pushed: over 4 years ago - Stars: 2 - Forks: 1

Frahiriart/Phylosnipping

Pipeline which make phylogeny with sequence of different sample

Language: Perl - Size: 26.8 MB - Last synced: 4 months ago - Pushed: over 4 years ago - Stars: 0 - Forks: 0

joaompsantos/sXp-to-json

:satellite: Touchstone file to javascript object conversion library

Language: JavaScript - Size: 5.43 MB - Last synced: 1 day ago - Pushed: almost 6 years ago - Stars: 2 - Forks: 0

babinyurii/virus-genome-assembly-using-NGS-data

workflow and notes on large virus genome assembly and snp call using FastQC, Trimmomatic, bowtie2, and samtools.

Language: Jupyter Notebook - Size: 305 MB - Last synced: about 1 year ago - Pushed: almost 5 years ago - Stars: 0 - Forks: 0

jnarayan81/asantulan

Linkage disequilibrium test tool to analyse all non-monomorphic single nucleotide polymorphisms

Language: Perl - Size: 19.5 KB - Last synced: about 1 year ago - Pushed: over 5 years ago - Stars: 0 - Forks: 0

yingeddi2008/utility

utility scripts for metagenomics, RNAseq etc. reads processing.

Language: Python - Size: 3.91 KB - Last synced: about 1 year ago - Pushed: over 6 years ago - Stars: 0 - Forks: 0

vforget/r-sq-prime

Implement R-prime measure of linkage disequilibrium

Language: R - Size: 837 KB - Last synced: about 1 year ago - Pushed: about 7 years ago - Stars: 0 - Forks: 0

jinzhuangdou/RADtyping

RADtyping: a user-defined perl procedure for performing de novo RAD genotyping in mapping populations.

Language: Perl - Size: 224 KB - Last synced: about 1 year ago - Pushed: about 7 years ago - Stars: 0 - Forks: 0