nf-core/mhcquant

Identify and quantify MHC eluted peptides from mass spectrometry raw data

Language: Nextflow - Size: 25.7 MB - Last synced at: 2 days ago - Pushed at: 2 days ago - Stars: 34 - Forks: 28

yutanagano/tidytcells

Standardise TR/MH data

Language: Python - Size: 40.3 MB - Last synced at: 3 days ago - Pushed at: 2 months ago - Stars: 8 - Forks: 2

zhengxwen/HIBAG

R package – HLA Genotype Imputation with Attribute Bagging (development version only)

Language: C++ - Size: 39.9 MB - Last synced at: 24 days ago - Pushed at: 5 months ago - Stars: 30 - Forks: 7

zhengxwen/HIBAG.gpu

GPU-based implementation for the HLA genotype imputation method (HIBAG)

Language: C++ - Size: 285 KB - Last synced at: about 1 month ago - Pushed at: over 1 year ago - Stars: 2 - Forks: 1

ramonamerong/hladownload

A tool for downloading HLA alleles, epitopes and frequencies

Language: Python - Size: 1.54 MB - Last synced at: 15 days ago - Pushed at: almost 2 years ago - Stars: 4 - Forks: 1

GSimas/MHC

👨‍🏫MHC website

Language: HTML - Size: 124 MB - Last synced at: about 1 year ago - Pushed at: about 6 years ago - Stars: 0 - Forks: 0

GfellerLab/MoDec

Tool for Motif Deconvolution in large HLA-II ligand datasets without the need of prior alignment.

Language: R - Size: 11.3 MB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 8 - Forks: 0

caraortizmah/BindingInteraction

Language: Shell - Size: 18.1 MB - Last synced at: over 1 year ago - Pushed at: almost 4 years ago - Stars: 2 - Forks: 3

jfnavarro/hla_pipeline

DNA and RNA variant calling pipelines with HLA typing and Neoantigen predictions

Language: Python - Size: 1.55 MB - Last synced at: over 1 year ago - Pushed at: almost 4 years ago - Stars: 8 - Forks: 2

vadimnazarov/adversarial-mhc

Adversarial autoencoders for MHCI epitope and immunogenicity prediction

Language: Jupyter Notebook - Size: 51.2 MB - Last synced at: over 1 year ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0

imminfo/mhc

Language: Jupyter Notebook - Size: 191 MB - Last synced at: over 1 year ago - Pushed at: about 8 years ago - Stars: 3 - Forks: 1

jvanderbiest/mhc.zone

Home of https://www.mhc.zone

Language: Less - Size: 3.8 MB - Last synced at: almost 2 years ago - Pushed at: almost 4 years ago - Stars: 2 - Forks: 0

jason-weirather/hla-polysolver

Fork of the Polysolver project

Language: Perl - Size: 22.3 MB - Last synced at: over 1 year ago - Pushed at: over 5 years ago - Stars: 25 - Forks: 18

immunomind/2019-airr-genova-tutorial-pytorch

Incredible Deep Learning in immunooncology with Pytorch - workshop at AIRR Community Meeting IV

Language: Jupyter Notebook - Size: 2.16 MB - Last synced at: about 2 years ago - Pushed at: almost 6 years ago - Stars: 8 - Forks: 0

Zethson/MHCBoost 📦

Language: Python - Size: 4.82 MB - Last synced at: about 2 years ago - Pushed at: over 5 years ago - Stars: 0 - Forks: 0

genomematt/xenomapper2

A utility for splitting mixed origin NGS reads with secondary or alt mappings

Language: Python - Size: 1.04 MB - Last synced at: over 1 year ago - Pushed at: almost 5 years ago - Stars: 3 - Forks: 1

xboston/metahash-go 📦

Metahash API client

Language: Go - Size: 173 KB - Last synced at: over 1 year ago - Pushed at: almost 4 years ago - Stars: 2 - Forks: 2

xboston/metahash-php 📦

Metahash API client

Language: PHP - Size: 1.87 MB - Last synced at: 2 months ago - Pushed at: almost 3 years ago - Stars: 6 - Forks: 8

chanwkimlab/MHC_Kor_Assoc

Phenome-wide association study of the major histocompatibility complex region in the Korean population identifies novel association signals

Language: Jupyter Notebook - Size: 29.2 MB - Last synced at: almost 2 years ago - Pushed at: about 3 years ago - Stars: 0 - Forks: 0

antigenomics/tcr-pmhc-study

Mining TCR:pMHC structural data

Language: Python - Size: 274 MB - Last synced at: 12 months ago - Pushed at: about 7 years ago - Stars: 5 - Forks: 1

xboston/mhc-tray-monitor Fork of schenkty/NanoStatus

Current MHC price in you menu bar

Language: Swift - Size: 819 KB - Last synced at: about 2 years ago - Pushed at: almost 6 years ago - Stars: 0 - Forks: 0

nmdp-bioinformatics/netMHC-spark

netMHC Apache Spark CLI

Language: Scala - Size: 11.7 KB - Last synced at: about 1 year ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 2