kleros/t2cr-to-ipfs

Pulls token information from the kleros t2cr and publishes them to ipfs following uniswap/token-lists schema.

Language: TypeScript - Size: 839 KB - Last synced: about 4 hours ago - Pushed: about 7 hours ago - Stars: 2 - Forks: 2

Perik-Zavodskii/TCRscape

TCRscape - a tool for simultaneous multimodal gene expression and clonotype analysis of single T-cells profiled via the BD Rhapsody system.

Language: Jupyter Notebook - Size: 30.5 MB - Last synced: 13 days ago - Pushed: 13 days ago - Stars: 0 - Forks: 0

immunomind/immunarch

🧬 Immunarch: an R Package for Fast and Painless Exploration of Single-cell and Bulk T-cell/Antibody Immune Repertoires

Language: R - Size: 425 MB - Last synced: 14 days ago - Pushed: about 2 months ago - Stars: 291 - Forks: 64

houseofcat/turbocookedrabbit

A user friendly RabbitMQ library written in Golang.

Language: Go - Size: 724 KB - Last synced: 21 days ago - Pushed: over 1 year ago - Stars: 108 - Forks: 20

slowkow/awesome-vdj

📚 Tools and databases for analyzing HLA and VDJ genes.

Size: 506 KB - Last synced: 25 days ago - Pushed: 25 days ago - Stars: 187 - Forks: 21

sidhomj/DeepTCR

Deep Learning Methods for Parsing T-Cell Receptor Sequencing (TCRSeq) Data

Language: Jupyter Notebook - Size: 102 MB - Last synced: 4 days ago - Pushed: over 1 year ago - Stars: 109 - Forks: 39

yanismiraoui/M4R-Project-Notebooks

Deep unsupervised learning methods for the identification and characterization of TCR specificity to Sars-Cov-2

Language: Jupyter Notebook - Size: 48.4 MB - Last synced: about 1 month ago - Pushed: 9 months ago - Stars: 0 - Forks: 0

uio-bmi/immuneML

immuneML is a platform for machine learning analysis of adaptive immune receptor repertoire data.

Language: Python - Size: 189 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 56 - Forks: 28

uio-bmi/ligo

LIgO is a tool for simulation of adaptive immune receptors and repertoires.

Language: Python - Size: 17.2 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 0 - Forks: 0

thecodingdoc/SwarmTCR

A tool to predicting the specificity of T Cell Receptor optimized with Swarm Intelligence

Language: C - Size: 213 MB - Last synced: 2 months ago - Pushed: 2 months ago - Stars: 2 - Forks: 0

JamieHeather/stitchr

Stitchr - a Python script to stitch together coding TCR nucleotide sequences from V, J, and CDR3 info

Language: Python - Size: 27.8 MB - Last synced: 2 months ago - Pushed: 2 months ago - Stars: 48 - Forks: 9

yutanagano/tidytcells

Standardise TR/MH data

Language: Python - Size: 40.3 MB - Last synced: 4 days ago - Pushed: about 2 months ago - Stars: 4 - Forks: 2

pintoinfant/netspan-app-v1

Decentralized PLMN (Public Land Mobile Network) Registry for Mobile Networks, created for the Althea IFi Hackathon using Next.js and Tailwind CSS.

Language: TypeScript - Size: 2.39 MB - Last synced: about 2 months ago - Pushed: 9 months ago - Stars: 0 - Forks: 0

miguelmota/awesome-token-curated-registries 📦

Curated list of awesome Token Curated Registry (TCR) resources.

Size: 15.6 KB - Last synced: about 2 months ago - Pushed: over 4 years ago - Stars: 72 - Forks: 10

islomar/tcr-workshop

Information and instructions for trying TCR workflow (test && commit || revert)

Language: Ruby - Size: 1.06 MB - Last synced: about 1 month ago - Pushed: 3 months ago - Stars: 39 - Forks: 9

instadeepai/FrameDiPT

FrameDiPT: an SE(3) diffusion model for protein structure inpainting

Language: Jupyter Notebook - Size: 42.4 MB - Last synced: 4 months ago - Pushed: 4 months ago - Stars: 22 - Forks: 2

kthomas4031/graded_TCR

Solidity smart contracts designed for Nonce+1's PPI

Size: 31.3 KB - Last synced: 6 months ago - Pushed: over 5 years ago - Stars: 0 - Forks: 0

joejag/tcr

Get going with 'test && commit || revert' in seconds

Language: JavaScript - Size: 313 KB - Last synced: about 2 months ago - Pushed: about 5 years ago - Stars: 11 - Forks: 1

pjsample/TCR-Epitope_Modeling

Modeling the binding of CDR3 sequences to epitopes.

Language: Python - Size: 2.29 MB - Last synced: 7 months ago - Pushed: about 5 years ago - Stars: 5 - Forks: 1

GuoBioinfoLab/CATT

An ultra-sensitive and precise tool for characterizing T cell CDR3 sequences in TCR-seq and RNA-seq data.

Language: Julia - Size: 178 MB - Last synced: 7 months ago - Pushed: 7 months ago - Stars: 18 - Forks: 4

pwwang/immunopipe-example

An example of immunopipe

Language: HTML - Size: 240 MB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 2 - Forks: 0

dekoskylab/Quality_control

Quality control scripts for AIRR-seq data

Language: Python - Size: 215 KB - Last synced: 7 months ago - Pushed: about 3 years ago - Stars: 1 - Forks: 0

ShalekLab/tcrgo

Identification and quantification of Seq-Well TCR transcripts and their recovered CDR3 sequences.

Language: Python - Size: 394 KB - Last synced: 8 months ago - Pushed: over 2 years ago - Stars: 1 - Forks: 1

mattfemia/iedb-python

Python SDK for Immune Epitope Database (IEDB) Analysis Tools API

Language: Python - Size: 7.81 KB - Last synced: 8 months ago - Pushed: about 3 years ago - Stars: 3 - Forks: 1

akds/BASIC

BASIC: BCR and TCR assembly from single cell RNA-seq

Language: Python - Size: 43.6 MB - Last synced: 8 months ago - Pushed: almost 5 years ago - Stars: 7 - Forks: 2

dyohanne/RepAn

Analysis functions for deep sequenced immune repertoire (Repseq) datasets in R

Language: R - Size: 12.3 MB - Last synced: 8 months ago - Pushed: over 1 year ago - Stars: 1 - Forks: 2

Madhan13K/TCR-INNOVATION-FINAL-ASSIGNMENT

These are the .ipynb files of TCR final assignment. Project Topic – 1)Wine Quality Prediction 2)Gold Price Prediction 3)Customer Credit card fraud detection Software Used – Jupyter Notebook

Language: Jupyter Notebook - Size: 958 KB - Last synced: 9 months ago - Pushed: over 2 years ago - Stars: 0 - Forks: 0

nec-research/tc-hard

Experiments for "On TCR Binding Predictors Failing to Generalize to Unseen Peptides", Grazioli et al., Frontiers in Immunology 2022

Language: Jupyter Notebook - Size: 1.68 MB - Last synced: 10 months ago - Pushed: 10 months ago - Stars: 2 - Forks: 1

BPerlakiH/Rspec_TCR

Test Commit || Reset for rspec + fswatch (on zsh)

Language: Shell - Size: 3.91 KB - Last synced: 10 months ago - Pushed: about 1 year ago - Stars: 1 - Forks: 0

BPerlakiH/swift_test_commit_reset

Test Commit || Reset for swift modules + fswatch

Language: Shell - Size: 6.84 KB - Last synced: 10 months ago - Pushed: about 4 years ago - Stars: 1 - Forks: 0

ysicing/cr

k8s免密拉取镜像组件

Language: Go - Size: 107 KB - Last synced: 10 months ago - Pushed: almost 3 years ago - Stars: 0 - Forks: 0

stefoxp/tcr-rope-sample

TCR-rope-sample

Language: Python - Size: 1000 Bytes - Last synced: 10 months ago - Pushed: about 4 years ago - Stars: 0 - Forks: 0

wukevin/tcr-bert

Large language modeling applied to T-cell receptor (TCR) sequences.

Language: Jupyter Notebook - Size: 361 MB - Last synced: 10 months ago - Pushed: about 2 years ago - Stars: 27 - Forks: 4

smangul1/imrep-cloud Fork of mandricigor/imrep

ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.

Language: C - Size: 13.3 MB - Last synced: 10 months ago - Pushed: almost 7 years ago - Stars: 0 - Forks: 0

imminfo/ymir

(Under development) Computational framework for probabilistic models of immune receptor assembling.

Language: C++ - Size: 2.62 MB - Last synced: 10 months ago - Pushed: almost 6 years ago - Stars: 1 - Forks: 1

programmers-gym/codeKata-ibsd

Language: Java - Size: 938 KB - Last synced: 10 months ago - Pushed: about 5 years ago - Stars: 0 - Forks: 0

codecop/limbo-experiment

Try the TCR and Limbo workflow with a group.

Language: Shell - Size: 704 KB - Last synced: 10 months ago - Pushed: over 1 year ago - Stars: 2 - Forks: 0

pengxingang/TEIM

TEIM: TCR-Epitope Interaction Modeling

Language: Python - Size: 59.2 MB - Last synced: 10 months ago - Pushed: 10 months ago - Stars: 28 - Forks: 2

fajrinard/Line-TCR

Line Bot TCR

Language: Python - Size: 283 KB - Last synced: 11 months ago - Pushed: over 2 years ago - Stars: 24 - Forks: 46

aislyn/TCR_circos

R function to generate a circos-style ggplot from single-cell TCR data.

Language: R - Size: 218 KB - Last synced: 9 months ago - Pushed: over 2 years ago - Stars: 4 - Forks: 0

imminfo/tcr

[DEPRECATED, see https://immunarch.com/] tcR: an R package for immune receptor repertoire advanced data analysis.

Language: R - Size: 33.4 MB - Last synced: 7 months ago - Pushed: almost 4 years ago - Stars: 36 - Forks: 24

immunogenomics/TiRP

code repository for Lagattuta et al. "Repertoire analyses reveal T cell receptor sequence features that influence T cell fate." Nat. Imm. (2022)

Language: Jupyter Notebook - Size: 186 MB - Last synced: 11 months ago - Pushed: over 1 year ago - Stars: 10 - Forks: 5

arigatodl/uber-ethereum

Decentralized uber-like system on ethereum

Language: JavaScript - Size: 125 KB - Last synced: 21 days ago - Pushed: 21 days ago - Stars: 5 - Forks: 1

hexagon6/tcr-node

Test && Commit || Revert (TCR) in node.js with Visual Studio Code

Language: JavaScript - Size: 1000 Bytes - Last synced: 15 days ago - Pushed: about 3 years ago - Stars: 2 - Forks: 0

gautamdhameja/substrate-tcr 📦

A Parity Substrate runtime implementation of a simple Token Curated Registry (TCR)

Language: Rust - Size: 665 MB - Last synced: over 1 year ago - Pushed: about 4 years ago - Stars: 47 - Forks: 15

WeTrustPlatform/charity-staking 📦

Work-in-progress. Dapp for Building Charity Registries.

Language: JavaScript - Size: 604 KB - Last synced: about 1 year ago - Pushed: over 5 years ago - Stars: 0 - Forks: 1

bandprotocol/campbase 📦

📱 [DEPRECATED] Campbase - Community-driven Data Curation (TCR) via Band Protocol

Language: TypeScript - Size: 3.22 MB - Last synced: over 1 year ago - Pushed: almost 6 years ago - Stars: 0 - Forks: 1

bandprotocol/whitepaper-legacy 📦

📜 [DEPRECATED] Whitepaper v1.0 - v2.0 of Band Protocol

Language: TeX - Size: 7.85 MB - Last synced: over 1 year ago - Pushed: almost 5 years ago - Stars: 4 - Forks: 0

gautamdhameja/substrate-tcr-ui 📦

A react.js frontend for Substrate TCR runtime.

Language: JavaScript - Size: 1.4 MB - Last synced: over 1 year ago - Pushed: almost 5 years ago - Stars: 14 - Forks: 5

gautamdhameja/bigchaindb-tcr 📦

A simple Token Curated Registry implementation based on BigchainDB.

Language: JavaScript - Size: 143 KB - Last synced: over 1 year ago - Pushed: over 5 years ago - Stars: 5 - Forks: 2

nec-research/vibtcr

Code for "Attentive Variational Information Bottleneck for TCR-peptide Interaction Prediction", Grazioli et al., Bioinformatics 2022

Language: Jupyter Notebook - Size: 43.3 MB - Last synced: about 1 year ago - Pushed: over 1 year ago - Stars: 18 - Forks: 0

andrej-dyck/kata-template-tcr

👩‍💻👨‍💻 A kata template for Test-Commit-Revert (TCR)

Language: JavaScript - Size: 23.4 KB - Last synced: about 1 year ago - Pushed: over 1 year ago - Stars: 2 - Forks: 0

les-tontons-crafters/submarine-tcr

TCR kata repository for the Software Craft Luxembourg Community Autumn Camp 2022

Language: Gherkin - Size: 11.7 MB - Last synced: about 1 month ago - Pushed: over 1 year ago - Stars: 4 - Forks: 4

unmade/cyprety-rental-bot 📦

This is backend for CYRentBot

Language: Python - Size: 144 KB - Last synced: over 1 year ago - Pushed: about 3 years ago - Stars: 8 - Forks: 1

antigenomics/tcr-pmhc-study

Mining TCR:pMHC structural data

Language: Python - Size: 274 MB - Last synced: 23 days ago - Pushed: about 6 years ago - Stars: 5 - Forks: 1

ShenLab/viralTCR

A machine learning method to predict TCR-peptide binding

Language: Python - Size: 6.08 MB - Last synced: 9 months ago - Pushed: about 4 years ago - Stars: 1 - Forks: 0

GuoBioinfoLab/TCRdb

A database of T-cell receptor sequences

Language: Python - Size: 658 KB - Last synced: about 1 year ago - Pushed: over 3 years ago - Stars: 5 - Forks: 0

gutocosta/tcr

Estudos com `Test && Commit || Revert`

Language: Shell - Size: 1000 Bytes - Last synced: about 1 year ago - Pushed: almost 4 years ago - Stars: 0 - Forks: 0

testingallthethings/017-php-tcr

Demonstration of Test && (Commit || Revert) in PHP

Language: PHP - Size: 16.6 KB - Last synced: about 1 year ago - Pushed: almost 4 years ago - Stars: 0 - Forks: 0

marmicode/limbo-demo

💃 limbo, Timeboxed TDD & TCR demo | as seen at @AngularUp https://youtu.be/izGz7H-8yIk

Language: HTML - Size: 4 MB - Last synced: about 1 year ago - Pushed: over 1 year ago - Stars: 1 - Forks: 0

nicopaez/tcr-ruby-template

Base project structure for tcr coding style katas

Language: Ruby - Size: 3.91 KB - Last synced: about 1 year ago - Pushed: over 5 years ago - Stars: 0 - Forks: 1

getlove555/getbe01

Language: Python - Size: 2.93 KB - Last synced: 2 months ago - Pushed: over 6 years ago - Stars: 0 - Forks: 0