VigiePirate/CakeLORD

Open breed registry dedicated to pet rats

Language: PHP - Size: 16.9 MB - Last synced: 4 days ago - Pushed: 5 days ago - Stars: 2 - Forks: 0

GPhMorin/GenLib.jl

A pure Julia port of R's GENLIB genetics and genealogical library

Language: Julia - Size: 897 KB - Last synced: 6 days ago - Pushed: 7 days ago - Stars: 1 - Forks: 0

allytrope/ped

A command line tool for filtering pedigree files and converting between pedigree file types

Language: Nim - Size: 14.6 KB - Last synced: 7 days ago - Pushed: 7 days ago - Stars: 1 - Forks: 0

MGeurts/genealogy

Genealogy is a free and open-source (family tree) application to record family members and their relationships, build with PHP (Laravel 11).

Language: PHP - Size: 12.1 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 68 - Forks: 13

rhagenson/relped

Relatedness Pedigree -- build a pedigree from relatedness

Language: Go - Size: 271 KB - Last synced: 15 days ago - Pushed: about 4 years ago - Stars: 0 - Forks: 1

brentp/pedfile

pedigree file parsing and relatedness calculations for nim

Language: Nim - Size: 39.1 KB - Last synced: 15 days ago - Pushed: over 3 years ago - Stars: 4 - Forks: 0

magicsunday/webtrees-pedigree-chart

SVG based pedigree chart module for webtrees genealogy application.

Language: JavaScript - Size: 1.63 MB - Last synced: 4 days ago - Pushed: 4 days ago - Stars: 47 - Forks: 14

germinateplatform/germinate-vue

Germinate is an open source plant database infrastructure and application programming platform on which complex data from genetic resource collections can be stored, queried and visualized.

Language: Vue - Size: 7.62 MB - Last synced: 16 days ago - Pushed: 21 days ago - Stars: 12 - Forks: 4

JiscaH/sequoia

R package for pedigree inference based on SNP data

Language: Fortran - Size: 81.9 MB - Last synced: 23 days ago - Pushed: 23 days ago - Stars: 23 - Forks: 6

brentp/peddy

genotype :: ped correspondence check, ancestry check, sex check. directly, quickly on VCF

Language: Jupyter Notebook - Size: 39.3 MB - Last synced: 14 days ago - Pushed: almost 3 years ago - Stars: 127 - Forks: 38

impworks/bonsai

Self-hosted family wiki engine / photoalbum

Language: C# - Size: 3.71 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 196 - Forks: 23

magnusdv/quickped

An online pedigree tool for research applications. Build pedigrees interactively and store as images or text files in ped format. QuickPed also computes a variety of relatedness coefficients and offers verbal descriptions of pairwise relationships.

Language: R - Size: 283 KB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 19 - Forks: 3

Serg-Norseman/GEDKeeper

GEDKeeper - program for work with personal genealogical database

Language: C# - Size: 60.9 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 137 - Forks: 40

justincy/d3-pedigree-examples

Examples of how to create family pedigrees with D3

Language: HTML - Size: 153 KB - Last synced: about 1 month ago - Pushed: over 7 years ago - Stars: 217 - Forks: 66

phenotips/open-pedigree

A free and open-source pedigree tool by PhenoTips®

Language: JavaScript - Size: 3.23 MB - Last synced: about 1 month ago - Pushed: 4 months ago - Stars: 40 - Forks: 25

AlexanderWillner/kingraph Fork of vabene1111/kingraph

Plots family trees using JavaScript and Graphviz

Language: JavaScript - Size: 906 KB - Last synced: 15 days ago - Pushed: over 1 year ago - Stars: 50 - Forks: 9

ligurio/open-history-data

Поиск людей из прошлого

Language: Python - Size: 162 KB - Last synced: about 1 month ago - Pushed: about 3 years ago - Stars: 24 - Forks: 3

allytrope/dendra

Browser-based inferface for exploring interactive animal pedigrees

Language: HTML - Size: 54.7 KB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 0 - Forks: 0

btmartin721/makePopMap

Python script to add population identifiers to STRUCTURE, PLINK, and PHYLIP files

Language: Python - Size: 50.8 KB - Last synced: 7 months ago - Pushed: over 3 years ago - Stars: 0 - Forks: 1

bgm-cwg/novoCaller

Language: C++ - Size: 62.5 KB - Last synced: 7 months ago - Pushed: over 3 years ago - Stars: 8 - Forks: 1

JiMouse/GeneTree

Integrated tool to build efficiently a genetic pedigree, a boadicea file and generate the corresponding clinical story [english/french]. Outil intégré pour construire efficacement un pedigree génétique, un fichier boadicea et générer l'histoire clinique correspondante. Disponible en français et en anglais.

Language: JavaScript - Size: 4.51 MB - Last synced: 7 months ago - Pushed: over 1 year ago - Stars: 8 - Forks: 1

PilotenChris/Pedigree-With-Multiple-Fathers

Pedigree program that allows the individuals to have multiple fathers.

Language: C# - Size: 166 KB - Last synced: 7 months ago - Pushed: 7 months ago - Stars: 1 - Forks: 0

variani/lme4qtl

Mixed models @lme4 + custom covariances + parameter constraints

Language: R - Size: 388 KB - Last synced: 7 months ago - Pushed: over 3 years ago - Stars: 44 - Forks: 8

yxrose/bcfr

Bin-map Constructer For RILs

Language: Python - Size: 10.9 MB - Last synced: 8 months ago - Pushed: 8 months ago - Stars: 9 - Forks: 4

ugcd/solarius

R interface to SOLAR

Language: R - Size: 8.66 MB - Last synced: 7 months ago - Pushed: over 5 years ago - Stars: 5 - Forks: 2

boennecd/pedmod

R package with quasi-Monte Carlo methods to estimate mixed models commonly used for random effect structures from pedigrees.

Language: HTML - Size: 41 MB - Last synced: 6 months ago - Pushed: over 1 year ago - Stars: 4 - Forks: 0

moritzlindner/ggped

Draws pedigrees using ggplot and kinship2

Language: R - Size: 47.9 KB - Last synced: 10 months ago - Pushed: 10 months ago - Stars: 0 - Forks: 0

cmosher01/gro-redux

Genealogy Research Organizer for Windows

Language: C++ - Size: 5.83 MB - Last synced: 16 days ago - Pushed: over 1 year ago - Stars: 0 - Forks: 1

mnsoln/Ped_raw

A website I made for the Regional University Hospital of Strasbourg for my 1 month intership in 2023. Its goal is to create, store and modify pedigree files.

Language: Vue - Size: 1.41 MB - Last synced: 10 months ago - Pushed: 10 months ago - Stars: 1 - Forks: 1

jraffa/pedRSP

Pedigree Relatedness Summary Parameters R package

Language: R - Size: 15.6 KB - Last synced: 12 months ago - Pushed: about 8 years ago - Stars: 1 - Forks: 0

sonisarm/Pedigree-analysis

Unlock and explore familial relationships in your dataset

Language: R - Size: 8.81 MB - Last synced: about 1 year ago - Pushed: about 1 year ago - Stars: 0 - Forks: 0

amamenko/inky-doodle

Interactive application with pedigree chart, paginated search features, and automated Instagram posts for Inky Doodle characters

Language: JavaScript - Size: 29 MB - Last synced: about 1 year ago - Pushed: over 1 year ago - Stars: 16 - Forks: 15

arielrezinn/pedigree

A web app to navigate and display my dog's pedigree. I didn't have much visualization experience prior to this and thought it would be a cool project.

Language: JavaScript - Size: 11.5 MB - Last synced: about 1 year ago - Pushed: about 1 year ago - Stars: 0 - Forks: 0

JiscaH/sequoia_notR

This Fortran program is the stand alone equivalent to the R package 'sequoia', and performs pedigree reconstruction from SNP data

Language: Fortran - Size: 3.22 MB - Last synced: 5 months ago - Pushed: 5 months ago - Stars: 0 - Forks: 1

zhuochenbioinfo/VcfWinSim

Calculate similarity between different samples using VCF format varaint data for IBS/IBD analysis.

Language: Perl - Size: 21.5 KB - Last synced: 12 months ago - Pushed: over 1 year ago - Stars: 0 - Forks: 1

GA4GH-Pedigree-Standard/pedigree

Repository for the family history/pedigree project

Size: 1 MB - Last synced: about 1 year ago - Pushed: over 1 year ago - Stars: 7 - Forks: 3

cnettel/cnF2freq

Compute haplotype and genotype probabilities, and perform imputation, in arbitrary pedigrees, including cases under possible observational errors.

Language: C++ - Size: 1.06 MB - Last synced: 7 months ago - Pushed: almost 2 years ago - Stars: 4 - Forks: 2

changebio/GraphPed

A novel graph-based visualization method for large and complex pedigrees

Language: Jupyter Notebook - Size: 350 KB - Last synced: about 2 months ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0

changebio/GraphPed1

a novel graph-based visualization method for large and complex pedigrees

Language: Jupyter Notebook - Size: 1.58 MB - Last synced: about 1 year ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0

bmcollier/lineage Fork of phenotips/open-pedigree

Lineage is a fork of "Open Pedigree", customised to handle animal pedigrees and genetic data.

Language: JavaScript - Size: 1.91 MB - Last synced: about 1 month ago - Pushed: about 2 years ago - Stars: 1 - Forks: 0

EuracBiomedicalResearch/FamAgg

This is the development version of the FamAgg Bioconductor package.

Language: R - Size: 3.65 MB - Last synced: 21 days ago - Pushed: about 1 year ago - Stars: 0 - Forks: 2

meiremans/horsecoin

Language: JavaScript - Size: 146 KB - Last synced: about 1 year ago - Pushed: over 2 years ago - Stars: 1 - Forks: 1

f05fk/Pedigree

A collection of scripts for drawing pedigrees.

Language: Perl - Size: 43 KB - Last synced: about 1 year ago - Pushed: almost 3 years ago - Stars: 0 - Forks: 0

nigjo/gedviews

GEDCOM Views Collection. A Web App with a collection of different views to display gedcom data.

Language: JavaScript - Size: 2.18 MB - Last synced: about 1 year ago - Pushed: over 3 years ago - Stars: 0 - Forks: 0

sushilashenoy/annotate-family-pairs

R script which can label relationships in a pedigree

Language: R - Size: 25.4 KB - Last synced: about 1 year ago - Pushed: over 4 years ago - Stars: 2 - Forks: 0

cbkmephisto/pedRefiner.py

Trivial tool that takes a list of animal IDs, extracts a csv pedigree file for the given IDs and all their ancestors' IDs, builds a new pedigree with them sorted, and stores it into a new file.

Language: Python - Size: 148 KB - Last synced: 27 days ago - Pushed: almost 7 years ago - Stars: 0 - Forks: 0

ammodramus/coalseam

Simulating coalescence through population pedigrees

Language: C - Size: 85.9 KB - Last synced: about 1 year ago - Pushed: over 7 years ago - Stars: 1 - Forks: 0