Angellrdz/repeated-measurement

An R-based workflow for conducting repeated measures ANOVA using the ez package, with data wrangling via tidyverse and visualization through ggplot2. Includes data import, transformation to long format, statistical analysis, and graphical summary.

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greentheguy/Regression-and-Statistical-Models-52571

# Regression-and-Statistical-Models-52571This repository contains course materials for "Introduction to Deep Learning (67822)" at The Hebrew University of Jerusalem. Taught by Dr. Assaf Weinstein and supported by tutorials from Niv Brosh, it covers key concepts in regression and statistical models. 🐙📊

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drizopoulos/JMbayes2

Extended Joint Models for Longitudinal and Survival Data

Language: R - Size: 368 MB - Last synced at: 5 days ago - Pushed at: 6 days ago - Stars: 88 - Forks: 24

fboehm/gemma2

Zhou & Stephens (2014) GEMMA multivariate linear mixed model

Language: R - Size: 5.74 MB - Last synced at: 1 day ago - Pushed at: over 4 years ago - Stars: 12 - Forks: 2

NathanP23/Regression-and-Statistical-Models-52571

Content of the course "Regression and Statistical Models (52571)" at The Hebrew University of Jerusalem, in the Department of Statistics and Data Science.

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Biometris/LMMsolver

See https://biometris.github.io/LMMsolver for a full description

Language: R - Size: 35 MB - Last synced at: 4 days ago - Pushed at: 4 days ago - Stars: 14 - Forks: 2

easystats/performance

:muscle: Models' quality and performance metrics (R2, ICC, LOO, AIC, BF, ...)

Language: R - Size: 692 MB - Last synced at: 10 days ago - Pushed at: 10 days ago - Stars: 1,078 - Forks: 98

ejolly/pymer4

All the convenience of lme4 in python

Language: Python - Size: 9.55 MB - Last synced at: 5 days ago - Pushed at: 13 days ago - Stars: 202 - Forks: 27

covaruber/sommer

Language: R - Size: 30.3 MB - Last synced at: 16 days ago - Pushed at: 16 days ago - Stars: 48 - Forks: 27

palday/MixedModelsExtras.jl

Extra non essential functionality for MixedModels.jl

Language: Julia - Size: 655 KB - Last synced at: 6 days ago - Pushed at: 7 months ago - Stars: 7 - Forks: 1

JuliaStats/MixedModels.jl

A Julia package for fitting (statistical) mixed-effects models

Language: Julia - Size: 40 MB - Last synced at: 14 days ago - Pushed at: 14 days ago - Stars: 425 - Forks: 49

jr-leary7/scLANE

Characterize gene dynamics over trajectories using GLMs, GEEs, & GLMMs.

Language: R - Size: 31.3 MB - Last synced at: 21 days ago - Pushed at: 21 days ago - Stars: 10 - Forks: 4

JuliaMixedModels/EmbraceUncertainty

The book "Embrace Uncertainty: Fitting Mixed-Effects Models with Julia"

Language: TeX - Size: 69 MB - Last synced at: 27 days ago - Pushed at: 27 days ago - Stars: 22 - Forks: 5

unfoldtoolbox/Unfold.jl

Neuroimaging (EEG, fMRI, pupil ...) regression analysis in Julia

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m-clark/mixedup

An R package for extracting results from mixed models that are easy to use and viable for presentation.

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m-clark/easy-bayes

Workshop to introduce participants to rstanarm and brms.

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m-clark/gammit

Functions for using mgcv for mixed models. 📈

Language: R - Size: 5.72 MB - Last synced at: about 1 month ago - Pushed at: over 4 years ago - Stars: 15 - Forks: 4

m-clark/visibly

👓 Functions related to R visualizations

Language: R - Size: 88.4 MB - Last synced at: about 18 hours ago - Pushed at: over 4 years ago - Stars: 63 - Forks: 4

m-clark/models-by-example

By-hand code for models and algorithms. An update to the 'Miscellaneous-R-Code' repo.

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cran-task-views/MixedModels

CRAN Task View: Mixed, Multilevel, and Hierarchical Models in R

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m-clark/Miscellaneous-R-Code

Code that might be useful to others for learning/demonstration purposes, specifically along the lines of modeling and various algorithms. **Superseded by the models-by-example repo**.

Language: R - Size: 11.2 MB - Last synced at: about 2 months ago - Pushed at: over 4 years ago - Stars: 196 - Forks: 82

palday/MixedModelsMakie.jl

Plotting functionality for MixedModels.jl implemented in Makie

Language: Julia - Size: 4.84 MB - Last synced at: 18 days ago - Pushed at: 2 months ago - Stars: 9 - Forks: 2

RePsychLing/SMLP2024 📦

SMLP2024: Advanced methods in frequentist statistics with Julia

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myles-lewis/glmmSeq

Gene-level general linear mixed model

Language: R - Size: 13.9 MB - Last synced at: 14 days ago - Pushed at: 5 months ago - Stars: 21 - Forks: 10

briencj/asremlPlus

asremlPlus is an R package that augments the use of 'ASReml-R' and 'ASReml4-R' in fitting mixed models

Language: R - Size: 68.5 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 18 - Forks: 3

neuropsychology/psycho.R

An R package for experimental psychologists

Language: R - Size: 7.36 MB - Last synced at: 5 days ago - Pushed at: over 1 year ago - Stars: 149 - Forks: 31

m-clark/mixed-models-with-R

Covers the basics of mixed models, mostly using @lme4

Language: R - Size: 58.8 MB - Last synced at: about 1 month ago - Pushed at: over 3 years ago - Stars: 137 - Forks: 42

drizopoulos/GLMMadaptive

GLMMs with adaptive Gaussian quadrature

Language: R - Size: 22.9 MB - Last synced at: 30 days ago - Pushed at: 3 months ago - Stars: 60 - Forks: 14

PharmCat/Metida.jl

Julia package for fitting mixed-effects models with flexible random/repeated covariance structure.

Language: Julia - Size: 5.56 MB - Last synced at: 30 days ago - Pushed at: 30 days ago - Stars: 26 - Forks: 0

strengejacke/sjstats

Effect size measures and significance tests

Language: R - Size: 5.25 MB - Last synced at: 19 days ago - Pushed at: 3 months ago - Stars: 190 - Forks: 21

basf/xeredar

Functions for automated statistical analysis of Xenopus Eleutherembryonic Thyroid Assays (XETA), Rapid Androgen Disruption Activity Reporter (RADAR) assays and Rapid Estrogen Activity In Vitro (REACTIV) assays.

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Mouse-Imaging-Centre/RMINC

Statistics for MINC volumes: A library to integrate voxel-based statistics for MINC volumes into the R environment. Supports getting and writing of MINC volumes, running voxel-wise linear models, correlations, etc.; correcting for multiple comparisons using the False Discovery Rate, and more. With contributions from Jason Lerch, Chris Hammill, Jim Nikelski and Matthijs van Eede. Some additional information can be found here:

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bambinos/formulae

Formulas for mixed-effects models in Python

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Uzezi93/Biostatistics-and-Experimental-Design

All homeworks submitted for the Biostatistics and Experimental Design Course BIOL 607 in Fall 2020

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PharmCat/MetidaBioeq.jl

This packege made foe bioequivalence testing.

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WevertonGomesCosta/Genomic-Selection-for-Drought-Tolerance-Using-Genome-Wide-SNPs-in-Casava

This website is a project for analysis of the Genomic Selection for Drought Tolerance Using Genome Wide GBS and/or DART in Cassava by EMBRAPA Mandioca.

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AIH-SGML/mixmil

Code for the paper: Mixed Models with Multiple Instance Learning

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Uzezi93/GWAS-Heat-Stress-Gene-Expression-Reproductive-Traits-Oryza-sativa

Workflow to analyze the effect of heat stress on rice growth and reproductive performance. Analysis include PCA and regression models

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RePsychLing/MixedModelsSim.jl

Simulation tools for Mixed Models

Language: Julia - Size: 1.93 MB - Last synced at: 19 days ago - Pushed at: 6 months ago - Stars: 19 - Forks: 4

palday/JellyMe4.jl

RCall support for MixedModels.jl and lme4

Language: Julia - Size: 148 KB - Last synced at: 23 days ago - Pushed at: 6 months ago - Stars: 13 - Forks: 2

suren-rathnayake/deepgmm

This package is provides a mixture model based approach for deep learning.

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strengejacke/mixed-models-snippets

This repository collects various small code snippets or short instructions on how to use or define specific mixed models, mostly with packages lme4 and glmmTMB.

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matthewwolak/gremlin

R package for mixed-effects REML incorporating Generalized Inverses

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DominiqueMakowski/CognitiveModels

Cognitive Models: Computational Modeling of Cognitive Processes with Bayesian Mixed Models in Julia

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huffyhenry/statsbomb-bayesian-shooting

Bayesian estimation of the finishing skill of football players

Language: R - Size: 314 KB - Last synced at: 8 days ago - Pushed at: over 7 years ago - Stars: 40 - Forks: 8

m-clark/R-models

A quick reference for how to run many models in R.

Language: R - Size: 21 MB - Last synced at: 6 days ago - Pushed at: about 7 years ago - Stars: 13 - Forks: 1

oliviergimenez/bayesian-stats-with-R

Material for a workshop on Bayesian stats with R

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hse-scila/mixed-effects-models

Curated list of the sources about multilevel models

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timeu/PyGWAS

Language: Python - Size: 63.3 MB - Last synced at: 2 months ago - Pushed at: over 6 years ago - Stars: 24 - Forks: 11

randel/MixRF

A random-forest-based approach for imputing clustered incomplete data

Language: R - Size: 182 KB - Last synced at: 6 days ago - Pushed at: about 8 years ago - Stars: 35 - Forks: 14

m-clark/mixed-models-with-R-workshop

This is the companion slides, data, and RStudio project for a workshop on mixed models.

Size: 41.5 MB - Last synced at: 12 days ago - Pushed at: over 4 years ago - Stars: 14 - Forks: 3

jamesmurray7/gmvjoint

Generalised joint models of survival and multivariate longitudinal data

Language: R - Size: 26.8 MB - Last synced at: 28 days ago - Pushed at: 8 months ago - Stars: 3 - Forks: 1

inbo/inlatools

An R package with useful functions to diagnose INLA models

Language: R - Size: 7.65 MB - Last synced at: about 1 month ago - Pushed at: 8 months ago - Stars: 4 - Forks: 2

xinkai-zhou/MixedModelsBLB.jl

A Julia package for analyzing massive longitudinal data using Linear Mixed Models (LMMs) through the Bag of Little Bootstrap (BLB) method.

Language: Julia - Size: 908 KB - Last synced at: 3 months ago - Pushed at: over 3 years ago - Stars: 3 - Forks: 0

BenRickard16/Advanced-Statistical-Modelling-III

All of my R code from the Advanced Statistical Modelling III module at Durham University

Language: R - Size: 821 KB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 0 - Forks: 0

mccarthy-m-g/alda

An R data package for the book "Applied longitudinal data analysis: Modeling change and event occurrence" by Singer and Willett (2003).

Language: R - Size: 15 MB - Last synced at: 2 months ago - Pushed at: 10 months ago - Stars: 1 - Forks: 1

jinghuazhao/Mixed-Models

Mixed Models with polygenic effects

Language: TeX - Size: 247 MB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 1 - Forks: 0

Zarah573/MixedModels

Mixed models analysis collaborative project: experimental design, data collection, and mixed model analysis.

Size: 418 KB - Last synced at: 3 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0

palday/economics2024

An introduction to the MixedModels.jl ecosystem in Julia

Language: Julia - Size: 11.7 MB - Last synced at: 1 day ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0

m-clark/clustered-data

Raw files for a document covering different approaches to dealing with dependent data.

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bdilday/mnre

multinomial random effects

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palday/MixedModelsPermutations.jl

Permutation tests for MixedModels.jl

Language: Julia - Size: 723 KB - Last synced at: 17 days ago - Pushed at: 3 months ago - Stars: 4 - Forks: 2

systemallica/morfist Fork of donlnz/morfist

Multi-target Random Forest implementation that can mix both classification and regression tasks.

Language: Python - Size: 1.32 MB - Last synced at: 18 days ago - Pushed at: about 1 year ago - Stars: 4 - Forks: 1

ljacquin/KRMM

Solves kernel ridge regression within the the mixed model framework. All the estimated components and parameters, e.g. BLUP of dual variables and BLUP of random predictor effects for the linear kernel (also known as RR-BLUP), are available.

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biol609/biol609.github.io

Course website and materials for Biology 609, Advanced Data Analysis for Biology, at UMass Boston

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insanj/arches 📦

🐚 travelog for gamers built in nodejs & postgresql https://arches.tech

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CANlab-IDC/differences-wm-capacity-analysis-2019

Differences in Working Memory Capacity Affect Online Spoken Word Recognition: Evidence from Eye-Movements

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psych-zhangguangyao/WorkShop

Some learning materials of statistics

Size: 5.29 MB - Last synced at: 8 months ago - Pushed at: over 5 years ago - Stars: 2 - Forks: 1

RezaDastranj/LMEASDRs.jl

Analysing Age-Specific Death Rates with MixedModels.jl

Language: Julia - Size: 22.6 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

severintroesch/mixed_modelling_genZ

generation Y vs Z performance comparison - mixed modelling

Language: R - Size: 315 KB - Last synced at: over 1 year ago - Pushed at: over 5 years ago - Stars: 0 - Forks: 0

surdebmalya/A-Clustered-Federated-Learning-Approach-for-Heart-Failure-Prediction

codes for different architectures of CFL

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RezaDastranj/LME-ASDRs

Age-Gender-Country-Specific Death Rates Modelling and Forecasting: A Linear Mixed-Effects Model

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timotheenivalis/RSB-R-Stats-Biology

Second year of the workshop series on biological statistics in R at RSB, ANU.

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RezaDastranj/GAMM-ASDRs

Generalized Additive Forecasting Mortality

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m-clark/generalized-additive-models-workshop-2019

A workshop on using generalized additive models and the mgcv package.

Language: R - Size: 15.2 MB - Last synced at: about 1 month ago - Pushed at: over 6 years ago - Stars: 27 - Forks: 16

igorkf/soil-carbon-stocks

How can we get an accurate estimate of carbon stocks across a landscape with minimal ground truth data?

Language: R - Size: 10.4 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 1

m-clark/mixed-models-with-r-workshop-2019

Workshop on using Mixed Models with R

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LinusKuehne/Aggregation-as-a-Simple-Alternative-to-Mixed-Models

This repo contains all the R scripts for the simulations and figures in the semester project "Aggregation as a Simple Alternative to Mixed Models" written by Linus Kühne under the supervision of Dr. Markus Kalisch

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lbelzile/edsm-f22

Course website for Experimental Design and Statistical Methods, Fall 2022

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UniversityProjects/FEM2

FEM for parabolic and mixed problems

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SchmidtPaul/MMFAIR

:chart_with_upwards_trend::seedling: Mixed Models for Agriculture in R

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kdzimm/PseudoreplicationPaper

Code used to carry out parameter estimation, correlation estimation, type 1 error analysis, and power analysis for our "Pseudoreplication in Single-Cell" study

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xbouteiller/BayesMix

A Bayesian mixed model for analyzing quantitative genetics data

Language: R - Size: 57.6 KB - Last synced at: over 1 year ago - Pushed at: about 7 years ago - Stars: 0 - Forks: 0

Holin-Chen/Norovirus-Transmission-LTCF

An infectious disease dynamics study on quantifying the roles of vomiting, diarrhea, and resident vs. staff in norovirus transmission in 107 U.S. nursing home outbreaks and evaluated the intervention effect on each outbreak by using Wallinga-Teunis method, regression analysis and applying stochastic infectious disease model.

Language: R - Size: 1.12 MB - Last synced at: over 1 year ago - Pushed at: about 4 years ago - Stars: 0 - Forks: 0

Allen-Ho-0302/Curveball-Swing-and-Miss

Create a model to evaluate pitcher’s ability to generate swing and miss(whiff) with curveballs.

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manucarl/warehouse_optimization

R code for exploratory data analysis, data preprocessing, mixed model selection and implementation of an adaptive large neighborhood search algorithm for batch execution time optimization in a large warehouse.

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durkeepk/sloper

R package for computing, extracting, and visualizing response-contingencies

Language: R - Size: 105 KB - Last synced at: over 1 year ago - Pushed at: about 6 years ago - Stars: 0 - Forks: 0

Holin-Chen/longitudinal-study-CAMP

A longitudinal analysis and statistical report on the developmental of pulmonary function in children with asthma and the impact of early intervention of anti-inflammatory drugs by using SAS. Data source was a teaching dataset from the Childhood Asthma Management Program (CAMP) provided by the National, Heart, Lung and Blood Institute.

Language: SAS - Size: 5.3 MB - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0

benrjbrown/Three_Level_Mixed_Model_of_Classroom_Data

This three level mixed model seeks to understand which variables mediated and moderated the relationship between demographic factors of children and educators, and measures of inappropriate behaviour (DESSA Mini Scale) and physical literacy (TEAF Clinical Scale).

Language: R - Size: 6.84 KB - Last synced at: over 1 year ago - Pushed at: about 3 years ago - Stars: 1 - Forks: 0

m-clark/more-mixed-models-2019

Demonstration of alternatives to lme4

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rentzb/bayesian-pape

Introduction to rstanarm

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zenjen-dev/multi-level-models

repository of programs ran in SAS and SQL with top to bottom setup of initial database, to regression analysis, to mixed model design

Language: SAS - Size: 86.9 KB - Last synced at: over 1 year ago - Pushed at: almost 4 years ago - Stars: 1 - Forks: 1

RePsychLing/SMLP2021 📦

Notebooks for SMLP2021

Language: Julia - Size: 18.1 MB - Last synced at: about 1 month ago - Pushed at: over 3 years ago - Stars: 27 - Forks: 7

stonegold546/py_cohens_d_calculators_gae

Python API for HLM analyses on Google App Engine

Language: Python - Size: 25.4 KB - Last synced at: almost 2 years ago - Pushed at: about 7 years ago - Stars: 1 - Forks: 0

stonegold546/py_cohens_d_calculators

Python API for HLM analyses

Language: Python - Size: 27.3 KB - Last synced at: almost 2 years ago - Pushed at: over 7 years ago - Stars: 0 - Forks: 0

boennecd/pedmod

R package with quasi-Monte Carlo methods to estimate mixed models commonly used for random effect structures from pedigrees.

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AnisZakari/Fake_review_detection

Creating an algorithm with Tensorflow to detect fake reviews

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johnjdavisiv/rmba

An easy-to-use R function for repeated-measure Bland-Altman analysis with mixed models

Language: R - Size: 116 KB - Last synced at: almost 2 years ago - Pushed at: almost 5 years ago - Stars: 3 - Forks: 0

IbrahimElzahaby/Statistics_for_Data_Scientists_-SDS-

SDS course assignments

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palday/krakow2023

Language: TeX - Size: 2.17 MB - Last synced at: 3 months ago - Pushed at: about 2 years ago - Stars: 1 - Forks: 0