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GitHub topics: ibd-analysis

VallejosGroup/lcmm-site

R Code and website for Longitudinal Fecal Calprotectin Profiles Characterize Disease Course Heterogeneity in Crohn’s Disease by Constantine-Cooke et al.

Language: R - Size: 62.2 MB - Last synced at: 20 days ago - Pushed at: 20 days ago - Stars: 2 - Forks: 1

a-thind/ideogram

HTML widget for displaying IBD segments in an interactive ideogram using Ideogram.js

Language: R - Size: 104 KB - Last synced at: about 2 years ago - Pushed at: over 2 years ago - Stars: 2 - Forks: 0

a-thind/IBDVar

A tool for prioritising identity-by-descent (IBD) variants in Whole Genome Sequencing (WGS) data from families with rare heritable diseases.

Language: Shell - Size: 4.79 MB - Last synced at: about 2 years ago - Pushed at: over 2 years ago - Stars: 2 - Forks: 0

zhuochenbioinfo/VcfWinSim

Calculate similarity between different samples using VCF format varaint data for IBS/IBD analysis.

Language: Perl - Size: 21.5 KB - Last synced at: almost 2 years ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 1

Related Keywords
ibd-analysis 4 genomics 2 ibd 2 vcf 1 pedigree 1 ibs 1 bioinformatics 1 wgs 1 variants 1 variant-filtering 1 variant-annotation 1 variant-analysis 1 prioritisation 1 identity-by-descent 1 ibis 1 visualisation 1 interactive-visualization 1 ideogram 1 ibd-segments 1 ibd-mapping 1 htmlwidget 1 genetics 1 chromosomes 1 rstats 1 longitudinal-studies 1 biomarkers 1