Ecosyste.ms: Repos
An open API service providing repository metadata for many open source software ecosystems.
GitHub topics: taxonomic-classifications
metagenome-atlas/atlas
ATLAS - Three commands to start analyzing your metagenome data
Language: Python - Size: 20.2 MB - Last synced: 2 days ago - Pushed: 2 days ago - Stars: 349 - Forks: 99
CatalogueOfLife/checklistbank
UI for checklistbank.org
Language: JavaScript - Size: 5.35 MB - Last synced: 23 days ago - Pushed: 23 days ago - Stars: 6 - Forks: 2
FOI-Bioinformatics/flextaxd
FlexTaxD (Flexible Taxonomy Databases) - Create, add, merge different taxonomy sources (QIIME, GTDB, NCBI and more) and create metagenomic databases (kraken2, ganon and more )
Language: Python - Size: 967 KB - Last synced: about 1 month ago - Pushed: 7 months ago - Stars: 63 - Forks: 7
signaturescience/metscale
MetScale: snakemake workflows to scale metagenome analyses
Language: Python - Size: 370 MB - Last synced: 18 days ago - Pushed: 18 days ago - Stars: 18 - Forks: 9
tryton/product_classification_taxonomic 📦
Mirror of product_classification_taxonomic
Language: Python - Size: 138 KB - Last synced: about 2 months ago - Pushed: over 1 year ago - Stars: 0 - Forks: 1
taxprofiler/taxpasta
TAXnomic Profile Aggregation and STAndardisation
Language: Python - Size: 2.15 MB - Last synced: about 2 months ago - Pushed: 2 months ago - Stars: 27 - Forks: 6
brendanf/FUNGuildR
Look Up Guild Information for Fungi in R
Language: R - Size: 95.7 KB - Last synced: 4 months ago - Pushed: 8 months ago - Stars: 13 - Forks: 5
boulund/merge_taxonomic_classifications
Merge Kaiju, Kraken, and CLARK-S classifications of metagenomic reads
Language: Python - Size: 11.7 KB - Last synced: 8 months ago - Pushed: over 7 years ago - Stars: 2 - Forks: 0
seadmustafa/Library-Blog-CMS
Library Blog CMS is an open source, content management system providing tools like a blogging engine, import and export of site content .
Size: 11.6 MB - Last synced: 10 months ago - Pushed: about 4 years ago - Stars: 0 - Forks: 0
qLSLab/ExTaxsI
Extaxsi is a bioinformatic library aimed to elaborate and visualize molecular and taxonomic informations.
Language: HTML - Size: 14.5 MB - Last synced: 7 days ago - Pushed: about 1 year ago - Stars: 4 - Forks: 2
pcantalupo/annotater
Annotate sequences by BLAST/Rapsearch including NCBI taxonomy information
Language: Perl - Size: 10.8 MB - Last synced: about 1 year ago - Pushed: almost 2 years ago - Stars: 4 - Forks: 0
NBISweden/TaxiFier
Taxonomic Classifier
Size: 13.7 KB - Last synced: about 1 year ago - Pushed: over 4 years ago - Stars: 0 - Forks: 0
