Topic: "metabolomics-data"
pmartR/pmartR
The pmartR R package provides functionality for quality control, normalization, exploratory data analysis, and statistical analysis of mass spectrometry (MS) omics data, in particular proteomic (either at the peptide or the protein level), lipidomic, and metabolomic data.
Language: R - Size: 84.4 MB - Last synced at: 4 days ago - Pushed at: 4 days ago - Stars: 42 - Forks: 18
ethanbass/chromConverter
Parsers for chromatography data in R (HPLC-DAD/UV, GC-FID, MS)
Language: R - Size: 8.05 MB - Last synced at: 5 days ago - Pushed at: 5 days ago - Stars: 35 - Forks: 3
lemaslab/rump
A Reproducible Untargeted Metabolomics Data Processing Pipeline
Language: HTML - Size: 2.76 GB - Last synced at: about 1 year ago - Pushed at: about 4 years ago - Stars: 10 - Forks: 8
computational-metabolomics/metabolomicsWorkbenchR
R/Bioconductor Package - Interface to the Metabolomics Workbench RESTful API
Language: R - Size: 5.03 MB - Last synced at: 6 months ago - Pushed at: 10 months ago - Stars: 9 - Forks: 1
KatjaDanielzik/MetaboDynamics
MetaboDynamics: a framework of probabilistic models to analyze longitudinal metabolomics data
Language: R - Size: 120 MB - Last synced at: 15 days ago - Pushed at: 16 days ago - Stars: 5 - Forks: 1
jasenfinch/metabolyseR
Methods for pre-treatment, modelling/data mining, and correlation analyses of metabolomics data
Language: R - Size: 58.8 MB - Last synced at: 25 days ago - Pushed at: about 1 year ago - Stars: 4 - Forks: 0
klevdiamanti/MS_targeted
MS_targeted is an open-source command-line pipeline for statistical analysis of mass spectrometry metabolomics data.
Language: C# - Size: 30.1 MB - Last synced at: over 1 year ago - Pushed at: over 5 years ago - Stars: 4 - Forks: 0
rformassspectrometry/MsBackendMetaboLights
MsBackend allowing to retrieve MS data from the MetaboLights repository.
Language: R - Size: 4.61 MB - Last synced at: 12 days ago - Pushed at: about 1 month ago - Stars: 2 - Forks: 0
jasenfinch/grover
Web API Framework for Mass Spectrometry Data Transfer
Language: R - Size: 6.43 MB - Last synced at: 21 days ago - Pushed at: almost 2 years ago - Stars: 2 - Forks: 1
GIST-CSBL/CMTs
R scripts for the preprocessing of urinary metabolite profiling data from the canine mammary tumors (CMTs)
Language: R - Size: 93.8 KB - Last synced at: about 1 year ago - Pushed at: over 3 years ago - Stars: 1 - Forks: 0
shyamsrinivasan/ident
Perform identifiability analysis in small kinetic models for experimental design using steady state fluxes and concentrations.
Language: Jupyter Notebook - Size: 281 MB - Last synced at: almost 2 years ago - Pushed at: almost 6 years ago - Stars: 1 - Forks: 2
cdiener/dycone
Analyze enzyme regulation with metabolome data.
Language: R - Size: 386 KB - Last synced at: over 1 year ago - Pushed at: over 6 years ago - Stars: 1 - Forks: 1
jajohnso29/jajohnso29
My professional repository of project and publication data files in computational biology and data science.
Size: 104 KB - Last synced at: 8 months ago - Pushed at: 8 months ago - Stars: 0 - Forks: 0
lgafeira/Genipin-alphaSynuclein
NMR data from intracellular metabolites of S. cerevisae cells
Size: 33.5 MB - Last synced at: about 2 years ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0
