Ecosyste.ms: Repos

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Package Usage: conda: r-ggrepel

:round_pushpin: Repel overlapping text labels away from each other.
8 versions
Latest release: over 1 year ago
35 dependent packages

View more package details: https://packages.ecosyste.ms/registries/anaconda.org/packages/r-ggrepel

View more repository details: https://repos.ecosyste.ms/hosts/GitHub/repositories/slowkow%2Fggrepel

Dependent Repos 34

brucemoran/tumour_only
Tumour-only DNA sequencing analysis
  • 0.9.1 environment.yaml

Size: 58.6 KB - Last synced: about 1 year ago - Pushed: over 1 year ago

johsr/gwas-regenie Fork of genepi/nf-gwas
A nextflow pipeline to perform whole genome regression modelling using regenie.
  • 0.9.1.* environment.yml

Size: 43.4 MB - Last synced: about 1 year ago - Pushed: over 1 year ago

villegar/DoGE
Differential Gene Expression Analysis Pipeline
  • 0.8.2.* environment.yml

Size: 16 MB - Last synced: 10 months ago - Pushed: almost 3 years ago

ikfj/ma-keiryo
  • environment.yml

Size: 23.4 KB - Last synced: about 2 months ago - Pushed: about 2 months ago

DLetch/Data-Visualisation-Project
  • environment.yml

Size: 9.04 MB - Last synced: about 1 year ago - Pushed: about 3 years ago

ImperialCollegeLondon/covid19model
Code for modelling estimated deaths and cases for COVID19.
  • environment.yml

Size: 64.8 MB - Last synced: 2 months ago - Pushed: about 3 years ago

brucemoran/RNAseq_kallisto
RNAseq with Kallisto
  • environment.yaml

Size: 52.7 KB - Last synced: about 1 year ago - Pushed: over 2 years ago

greenelab/pancancer
Building classifiers using cancer transcriptomes across 33 different cancer-types
  • 0.8.0.* environment.yml

Size: 28.8 MB - Last synced: 7 months ago - Pushed: about 5 years ago

T3choH4ck3r/array
  • workflow/envs/environment.yaml

Size: 14.7 MB - Last synced: about 1 month ago - Pushed: over 2 years ago

pangenome/pgge
the pangenome graph evaluator
  • 0.9.1.* environment.yml

Size: 23 MB - Last synced: about 1 year ago - Pushed: about 3 years ago

GWeindel/lecture_R
A really short introduction (4 hours lecture) for psychology doctoral students at Aix Marseille University.
  • 0.9.1 environment.yml

Size: 4 MB - Last synced: about 1 year ago - Pushed: about 3 years ago

happykhan/journal
Citation lists
  • 0.9.1 environment.yml

Size: 28 MB - Last synced: about 1 year ago - Pushed: about 1 year ago

canceromics/MeRIPseqPipe
MeRIPseqPipe：An integrated analysis pipeline for MeRIP-seq data based on Nextflow.
  • 0.8.1.* environment.yml

Size: 38 MB - Last synced: 6 days ago - Pushed: about 2 years ago

yangmqglobe/dapipe
自动化的 ATAC-Seq 分析流程
  • 0.9.1.* environment.yml

Size: 193 KB - Last synced: about 1 year ago - Pushed: over 1 year ago

sbonaretti/pyKNEEr
An image analysis workflow for open and reproducible research on femoral knee cartilage
  • environment.yml

Size: 435 MB - Last synced: 28 days ago - Pushed: 10 months ago

andrealauria104/ngsRtools
A Suite of R Packages for NGS-based Epigenomic Data Analysis.
  • 0.8.1.* data/environment.yml

Size: 714 KB - Last synced: about 1 month ago - Pushed: about 1 year ago

brucemoran/somatic_n-of-1
Somatic-Germline n-of-1 DNAseq Analysis
  • environment.yaml

Size: 317 KB - Last synced: about 1 year ago - Pushed: over 1 year ago

sadamov/phenology_curve_fitting
Fitting of phenological season description curves to historical pollen measurements.
  • 0.9.1 environment.yml

Size: 53.1 MB - Last synced: about 1 year ago - Pushed: over 1 year ago

lazyky/meripseqpipe
MeRIP-seq analysis pipeline arranged multiple alignment tools, peakCalling tools, Merge Peaks' methods and methylation analysis methods.
  • 0.8.1.* environment.yml

Size: 520 KB - Last synced: 7 months ago - Pushed: almost 3 years ago

greenelab/2022-cf-sputum
Analysis of cystic fibrosis sputum RNA-seq samples for discovery of interesting gene expression pathways
  • 0.9.1 environment.yml

Size: 4.92 MB - Last synced: 9 months ago - Pushed: over 1 year ago

kevinpryan/caf-subtype-analysis
  • 0.9.1 environment.yml

Size: 56.9 MB - Last synced: 8 months ago - Pushed: 8 months ago

ndelrossi7/giotto-tutorial-binder
  • environment.yml

Size: 5.62 MB - Last synced: about 1 year ago - Pushed: about 3 years ago

leipzig/m6a
Reproduction/refactor of Dominissini et al Topology of the human and mouse m6A RNA methylomes revealed by m6A-seq
  • 0.8.1.* meripseqpipe/environment.yml

Size: 182 KB - Last synced: about 1 year ago - Pushed: over 2 years ago

crimBubble/ECCsplorer
The ECCsplorer is a bioinformatics pipeline for the automated detection of extrachromosomal circular DNA (eccDNA) from paired-end read data of amplified circular DNA.
  • environment.yml

Size: 15.9 MB - Last synced: 8 months ago - Pushed: 8 months ago

gonzalosm98/scRNA-SeqAnalysis
  • 0.9.1 environment.yml

Size: 62.5 KB - Last synced: about 1 year ago - Pushed: over 1 year ago

ekirving/ms_paper
Source code from the paper: "Elevated Genetic Risk for Multiple Sclerosis Originated in Steppe Pastoralist Populations." (2022) bioRxiv
  • 0.9.1.* environment.yaml

Size: 3.42 MB - Last synced: about 2 months ago - Pushed: 9 months ago

t-neumann/slamseq
nf-core slamseq development repository
  • 0.8.2.* environment.yml

Size: 2 MB - Last synced: 7 months ago - Pushed: over 3 years ago

dieterich-lab/ImmunOMICS
  • 0.9.2 environment.yml

Size: 27.6 MB - Last synced: 2 months ago - Pushed: about 1 year ago

samwitham/PromoterArchitecture
Arabidopsis thaliana promoter architecture analysis pipeline
  • 0.8.2 environment.yml

Size: 187 MB - Last synced: 7 months ago - Pushed: 9 months ago

SteMIDIfactory/P-DOR
Quick and easy outbreak reconstruction pipeline
  • 0.9.1 environment.yml

Size: 37.7 MB - Last synced: 3 months ago - Pushed: 8 months ago

phbradley/tcr-gwas
Collaboration to find genetic variation associated with TCR repertoire differences
  • 0.9.1 environment.yml

Size: 176 MB - Last synced: about 1 month ago - Pushed: over 2 years ago

magdalenarussell/mechanistic-trimming
Collaboration to identify sequence-level determinants of nucleotide trimming during V(D)J recombination
  • 0.9.1 environment.yml

Size: 187 MB - Last synced: 2 days ago - Pushed: 2 days ago

ParkerLab/ataqv-2019
  • 0.8.0.* environment.yml

Size: 2.54 MB - Last synced: 10 months ago - Pushed: over 4 years ago

greenelab/multiple-myeloma-classifier
Multi-class KRAS/NRAS Classifier for Multiple Myeloma
  • 0.7.0.* environment.yml

Size: 1.52 MB - Last synced: 7 months ago - Pushed: about 5 years ago

Ghoshlab/PaIRKAT_Shiny
R Shiny app interface for PaIRKAT algorithm
  • environment.yml

Size: 7.78 MB - Last synced: 9 months ago - Pushed: over 2 years ago

EpiDiverse/ewas
The EpiDiverse Epigenome-Wide Association Study Pipeline, implemented with Nextflow
  • 0.9.1.* env/environment.yml

Size: 20.9 MB - Last synced: 7 months ago - Pushed: about 1 year ago

AmirAlavi/sc-alignment-benchmarking
Supporting data and benchmarking software for our SCIPR paper. (Under Construction)
  • 0.8.1 data/environment.yml

Size: 45.6 MB - Last synced: 10 months ago - Pushed: almost 4 years ago

maizeumn/grn
Maize Gene regulatory network (MaizeGRN)
  • 0.8.2.* environment.yml

Size: 24.1 MB - Last synced: about 1 year ago - Pushed: over 3 years ago

kouamano/binder_env
  • environment.yml

Size: 0 Bytes - Last synced: about 1 year ago - Pushed: about 3 years ago

gagneurlab/FRASER-analysis
Accompanying analysis code for the FRASER manuscript
  • environment.yml

Size: 4.67 MB - Last synced: 10 days ago - Pushed: over 3 years ago

yangmqglobe/depipe
自动化的 ChIP-Seq 分析流程
  • 0.9.1.* environment.yml

Size: 16.7 MB - Last synced: about 1 year ago - Pushed: about 1 year ago

nerettilab/scRNA_seq
Utilities scripts for the analysis of single cell transcriptomics
  • 0.9.1 environment.yml

Size: 23.4 KB - Last synced: 5 months ago - Pushed: almost 3 years ago

kdm9/2020_hpa-geogenet
  • environment.yml

Size: 229 KB - Last synced: about 1 year ago - Pushed: over 2 years ago

Liang-ZX/OAI-registration
Official code for ISMRM 2021 Longitudinal Registration of Knee MRI Based on Femoral and Tibial Alignment
  • pykneer-yg/environment.yml

Size: 180 MB - Last synced: about 1 year ago - Pushed: about 1 year ago

higsch/togetherforever
You like it or not, but transcriptome and proteome are stronger together!
  • 0.8.0.* environment.yml

Size: 46.9 KB - Last synced: about 1 year ago - Pushed: about 5 years ago

Jacobog02/Maslenlab_Thesis
Thesis code repository for analysis of Illumina Bisulfite Sequencing data.
  • 0.8.2.* env/environment.yml

Size: 2.25 MB - Last synced: about 1 year ago - Pushed: over 3 years ago

AstrobioMike/binder-BRAILLE
  • environment.yml

Size: 16.2 MB - Last synced: about 1 year ago - Pushed: over 3 years ago

ksomf/tidy_tuesday
  • environment.yml

Size: 9.52 MB - Last synced: 9 months ago - Pushed: 9 months ago

mikegloudemans/colocalization-ensemble-pipeline
Colocalization analysis of GWAS and eQTL loci in brain tissues.
  • 0.9.1.* snakemake/environment.yml

Size: 506 KB - Last synced: about 1 year ago - Pushed: over 2 years ago

kelly-sovacool/advent-of-code
My solutions to the Advent of Code puzzles.
  • 0.9.1 environment.yml

Size: 132 KB - Last synced: 18 days ago - Pushed: over 1 year ago

TeamPerie/Report_Daphne Fork of dvginneken/Reproduce_Thesis_InstitutCurie
  • 0.9.3 environment.yml

Size: 32.6 MB - Last synced: 10 months ago - Pushed: 10 months ago

zxky-sys/meripseqpipe Fork of lazyky/meripseqpipe
MeRIP-seq analysis pipeline arranged multiple alignment tools, peakCalling tools, Merge Peaks' methods and methylation analysis methods.
  • 0.8.1.* environment.yml

Size: 56.3 MB - Last synced: 10 months ago - Pushed: almost 4 years ago

vmgiang/SARS-CoV-2-freebayes Fork of cfarkas/SARS-CoV-2-freebayes
Analysis of SARS-CoV-2 genome variants collected with freebayes variant caller
  • environment.yml

Size: 1.15 MB - Last synced: 8 months ago - Pushed: almost 3 years ago

nf-core/slamseq Fork of t-neumann/slamseq
SLAMSeq processing and analysis pipeline
  • 0.8.2.* environment.yml

Size: 4.46 MB - Last synced: 10 days ago - Pushed: 10 days ago

ministryofjustice/occupeye-shiny-app
• This repository is defined and managed in Terraform
  • 0.8.1 environment.yml

Size: 488 KB - Last synced: about 1 month ago - Pushed: 6 months ago

Mye-InfoBank/SIMBA
A nextflow pipeline for processing sc-RNASeq data, performing QC and integration and preparing the results for further investigation using cellxgene.
  • 0.9.5 docker/rpy/environment.yml

Size: 981 MB - Last synced: about 1 month ago - Pushed: about 1 month ago

fdu-wangfeilab/stDiff
A novel method named stDiff investigates the potential of employing diffusion models for single-cell omics generation.
  • 0.9.1 environment.yml

Size: 268 MB - Last synced: 6 days ago - Pushed: 2 months ago

SMU-Econ-Growth/EconGrowthUG-binder
mybinder for our course
  • environment.yml

Size: 55.7 KB - Last synced: about 2 months ago - Pushed: 2 months ago

hds-sandbox/transcriptomics_app_ucloud
Development of the transcriptomics app based on Rstudio for UCloud
  • scripts/environment.yml

Size: 7.42 MB - Last synced: about 1 month ago - Pushed: about 1 month ago

SteinPanyu/IndependentReproducibility
  • 0.9.2 environment.yaml

Size: 20.2 MB - Last synced: 12 days ago - Pushed: 12 days ago

dvginneken/PLM-likelihoods
  • 0.9.5 environment.yml

Size: 7.14 MB - Last synced: 1 day ago - Pushed: 2 days ago

craigbrinkerhoff/CONUS_ephemeral
  • 0.9.1 environment.yml

Size: 732 MB - Last synced: about 5 hours ago - Pushed: about 7 hours ago