GitHub / maximilianh / multiSub
Prepares a SARS-CoV-2 submission for GISAID, NCBI or ENA. Can read GISAID or NCBI files, or plain fasta+tsv/csv/xls. Finds files in input directory and merges everything into a single output directory. Auto-detects input file formats. Can submit the results to multiple repositories from the command line.
JSON API: http://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/maximilianh%2FmultiSub
PURL: pkg:github/maximilianh/multiSub
Stars: 35
Forks: 2
Open issues: 2
License: gpl-3.0
Language: Python
Size: 1020 KB
Dependencies parsed at: Pending
Created at: over 4 years ago
Updated at: about 1 year ago
Pushed at: over 3 years ago
Last synced at: about 1 year ago
Topics: ena, fasta, genbank, gisaid-format, gisaid-upload, gisaid-uploader, gisaid-xls, meta-data, ncbi, ncbi-ftp, sars-cov-2, sarscov2, tsv