maximilianh/multiSub

Prepares a SARS-CoV-2 submission for GISAID, NCBI or ENA. Can read GISAID or NCBI files, or plain fasta+tsv/csv/xls. Finds files in input directory and merges everything into a single output directory. Auto-detects input file formats. Can submit the results to multiple repositories from the command line.

Language: Python - Size: 1020 KB - Last synced at: 9 months ago - Pushed at: about 3 years ago - Stars: 35 - Forks: 2