Ecosyste.ms: Repos

An open API service providing repository metadata for many open source software ecosystems.

GitHub topics: beta-diversity

parallel, efficient and ensemble analysis of Rao's Q spectral diversity using remote sensing datasets.

Language: Jupyter Notebook - Size: 160 MB - Last synced: about 4 hours ago - Pushed: about 18 hours ago - Stars: 1 - Forks: 0

Repository for course project in Bioinformatics Institute 2023-2024

Language: Jupyter Notebook - Size: 30 MB - Last synced: 4 days ago - Pushed: 5 days ago - Stars: 0 - Forks: 1

A tool for the spatial analysis of diversity

Language: Perl - Size: 452 MB - Last synced: about 15 hours ago - Pushed: 13 days ago - Stars: 72 - Forks: 19

A pipeline for phylogenetic diversity analysis of GBIF-mediated data

Language: R - Size: 18.1 MB - Last synced: 13 days ago - Pushed: 14 days ago - Stars: 7 - Forks: 0

Repository for report for study project «Human Microbiome Research» by Blastim

Language: HTML - Size: 12.7 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 0 - Forks: 0

The following codes are focused on microbiome analysis, alpha, beta and relative abundance differences.

Language: R - Size: 1.34 MB - Last synced: 2 months ago - Pushed: 2 months ago - Stars: 3 - Forks: 0

metaGEENOME is a 16S rRNA metagenomic analysis tool that encompasses nearly all steps of downstream analysis.

Language: R - Size: 13.6 MB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 0 - Forks: 0

A comprehensive and customizable R package for microbiome analysis.

Language: R - Size: 18.8 MB - Last synced: about 1 year ago - Pushed: over 1 year ago - Stars: 18 - Forks: 3

R package for building turnover saturation curves via bootstrapping

Language: R - Size: 203 KB - Last synced: 14 days ago - Pushed: over 1 year ago - Stars: 2 - Forks: 0

Microbiome Data Analysis

Language: Python - Size: 42 KB - Last synced: about 1 year ago - Pushed: about 5 years ago - Stars: 1 - Forks: 0

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