GitHub topics: alpha-diversity
PopovIILab/BatShotMetaFlow
🦇🧫📊Study on bat gut shotgun metagenomics
Language: Jupyter Notebook - Size: 8.37 MB - Last synced at: 23 days ago - Pushed at: 23 days ago - Stars: 1 - Forks: 1
vallenderlab/MicrobiomeR
A comprehensive and customizable R package for microbiome analysis.
Language: R - Size: 18.8 MB - Last synced at: 6 days ago - Pushed at: over 2 years ago - Stars: 23 - Forks: 4
jvtarss/ccm-2024
TEIXEIRA, J. V. A.; SOUZA, E. C. Use of microbial fuel cell systems in wastewater treatment in connection with bioenergy generation. Desafios. Revista Interdisciplinar da Universidade Federal do Tocantins. Palmas, 2025. DOI: // Microbial fuel cells: Unveiling microbial diversity for sustainable wastewater treatment and bioenergy production
Language: Python - Size: 95.5 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 1 - Forks: 1
gkeimiyake/homogeneiza-o-bi-tica
verificacao da homogeneidade biotica em bioma de restinga de mata atlantica atraves de testes de alfa e beta diversidade para riqueza e abundancia de especies
Language: R - Size: 4.88 KB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 0 - Forks: 0
metagenopolis/ESKRIM
ESKRIM is a reference-free tool that compares microbial richness in shotgun metagenomic samples by counting k-mers
Language: Python - Size: 68.4 KB - Last synced at: 8 months ago - Pushed at: 10 months ago - Stars: 2 - Forks: 0
iliapopov17/The-shadow-of-HIV
Repository for course project in Bioinformatics Institute 2023-2024
Language: Jupyter Notebook - Size: 32 MB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 3 - Forks: 1
JTSALAH/Fish-Diversity-Ecology-Assessment
Take advantage of the adehabitat packages in R to determine ecological community richness: including alpha, beta, and gamma diversity!
Language: HTML - Size: 354 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0
iliapopov17/Human-Microbiome-Research-Manual
Repository for report for study project «Human Microbiome Research» by Blastim
Language: HTML - Size: 12.7 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0
Brochado-Kith/microbiome_analysis
The following codes are focused on microbiome analysis, alpha, beta and relative abundance differences.
Language: R - Size: 1.34 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 3 - Forks: 0
Ahmed-A-Mohamed/metaGEENOME
metaGEENOME is a 16S rRNA metagenomic analysis tool that encompasses nearly all steps of downstream analysis.
Language: R - Size: 13.6 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0
shivankurkapoor/microbiome-data-analysis
Microbiome Data Analysis
Language: Python - Size: 42 KB - Last synced at: about 2 years ago - Pushed at: about 6 years ago - Stars: 1 - Forks: 0
Microbiome-Diversity-Inspector/Microbiome-Diversity-Inspector
Microbiome Diversity Inspector - A platform for visual analysis of microbiome data.
Language: JavaScript - Size: 40.8 MB - Last synced at: about 2 years ago - Pushed at: almost 7 years ago - Stars: 1 - Forks: 2
philippmuench/AIH_metagenome
code to reproduce AIH results
Language: R - Size: 35.9 MB - Last synced at: about 2 years ago - Pushed at: about 7 years ago - Stars: 4 - Forks: 3
