GitHub topics: amplicon-pipeline
quadram-institute-bioscience/dadaist2
Dadaist2 🟨 Highway to R
Language: HTML - Size: 40.6 MB - Last synced at: 9 days ago - Pushed at: about 2 months ago - Stars: 13 - Forks: 5
jvtarss/ccm-2024
TEIXEIRA, J. V. A.; SOUZA, E. C. Use of microbial fuel cell systems in wastewater treatment in connection with bioenergy generation. Desafios. Revista Interdisciplinar da Universidade Federal do Tocantins. Palmas, 2025. DOI: // Microbial fuel cells: Unveiling microbial diversity for sustainable wastewater treatment and bioenergy production
Language: Python - Size: 95.5 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 1 - Forks: 1
CCBR/CCBR_circRNA_AmpliconSeq
Snakemake workflow to process circRNA AmpliconSeq datasets generated to study circRNAs in KSHV and human hosts using divergent primers.
Language: Shell - Size: 480 KB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 1
EBI-Metagenomics/pipeline-v5
This repository contains all CWL descriptions of the MGnify pipeline version 5.0.
Language: HTML - Size: 376 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 21 - Forks: 20
444thLiao/amplicon_workflow
amplicon analysisng pipelines based on luigi with qiime2-dada2/ qiime2-deblur/vsearch/usearch
Language: Python - Size: 54.4 MB - Last synced at: 8 months ago - Pushed at: 8 months ago - Stars: 6 - Forks: 3
Aveglia/vAMPirus
Automated virus amplicon sequencing analysis program integrated with Nextflow pipeline manager.
Language: Nextflow - Size: 28 MB - Last synced at: about 1 month ago - Pushed at: 11 months ago - Stars: 9 - Forks: 3
sebrauschert/OceanOmics-amplicon
A pipeline to analyse marine fish amplicon data
Language: R - Size: 42.2 MB - Last synced at: 11 months ago - Pushed at: over 1 year ago - Stars: 4 - Forks: 2
ohmeta/qiimepi
Snakemake version of QIIME2
Language: Python - Size: 163 KB - Last synced at: 3 days ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 0
yoann-dufresne/SLIM
A web app for environmental DNA metabarcoding analysis
Language: JavaScript - Size: 75.7 MB - Last synced at: about 2 years ago - Pushed at: over 3 years ago - Stars: 7 - Forks: 7
