Ecosyste.ms: Repos
An open API service providing repository metadata for many open source software ecosystems.
GitHub topics: metagenomic-data
EBI-Metagenomics/pipeline-v5
This repository contains all CWL descriptions of the MGnify pipeline version 5.0.
Language: HTML - Size: 376 MB - Last synced: about 1 month ago - Pushed: 10 months ago - Stars: 20 - Forks: 18
molleraj/MetaCRAST
MetaCRAST: reference-guided CRISPR detection in metagenomes
Language: Perl - Size: 21.2 MB - Last synced: 3 months ago - Pushed: about 4 years ago - Stars: 10 - Forks: 1
muellan/metacache
memory efficient, fast & precise taxnomomic classification system for metagenomic read mapping
Language: C++ - Size: 149 MB - Last synced: 3 months ago - Pushed: 3 months ago - Stars: 55 - Forks: 10
linsalrob/partie
PARTIE is a program to partition sequence read archive (SRA) metagenomics data into amplicon and shotgun data sets. The user-supplied annotations of the data sets can not be trusted, and so PARTIE allows automatic separation of the data.
Language: Perl - Size: 245 MB - Last synced: 7 months ago - Pushed: about 1 year ago - Stars: 22 - Forks: 5
karkman/physalia_metagenomics
Environmental metagenomics, Spring 2021, Physalia Courses
Language: R - Size: 51.8 MB - Last synced: 11 months ago - Pushed: about 3 years ago - Stars: 7 - Forks: 6
D4GEN-Genopole/MAC
Développement des outils informatiques pour l'analyse de données - Projet porté par Lucie FRIEDLANDER - Eagle Genomics
Size: 1.95 KB - Last synced: about 1 year ago - Pushed: about 2 years ago - Stars: 0 - Forks: 0
rcs333/CLOMP
:horse: CLinically Okay Metagenomic Pipeline :horse:
Language: Python - Size: 311 KB - Last synced: about 1 month ago - Pushed: over 4 years ago - Stars: 6 - Forks: 3
