Ecosyste.ms: Repos

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GitHub topics: canonical-base-pairs

jaswindersingh2/RNAcmap

A Fully Automatic Method for Predicting Contact Maps of RNAs by Evolutionary Coupling Analysis

Language: Python - Size: 475 KB - Last synced: 7 months ago - Pushed: 7 months ago - Stars: 8 - Forks: 2

jaswindersingh2/SPOT-RNA

RNA Secondary Structure Prediction using an Ensemble of Two-dimensional Deep Neural Networks and Transfer Learning.

Language: Perl - Size: 6.82 MB - Last synced: 8 months ago - Pushed: over 1 year ago - Stars: 81 - Forks: 30

jaswindersingh2/SPOT-RNA2

Improved RNA Secondary Secondary Structure Prediction using Evolutionary Profile, Mutational Coupling and Two-dimensional Transfer Learning

Language: Perl - Size: 185 MB - Last synced: 8 months ago - Pushed: about 3 years ago - Stars: 20 - Forks: 7

Related Keywords
canonical-base-pairs 3 pseudoknot-base-pairs 3 direct-coupling-analysis 2 lone-pairs 2 deep-learning 2 transfer-learning 2 non-canonical-base-pairs 2 rna-secondary-structure 2 multiplets-base-pairs 1 noncanonical-base-pairs 1 pdb-dataset 1 resnet 1 rna 1 rna-secondary-structure-prediction 1 rna-structural-analysis 1 rna-structure 1 rna-structure-motifs 1 tensorflow 1 base-triples 1 evolutionary-information 1 homologous-sequence 1 multiple-sequence-alignment 1 spot-rna2 1 blastn 1 end-to-end-pipeline 1 evolutionary-couplings 1 gremlin 1 infernal 1 mf-dca 1 msa 1 plmc 1 rna-contact-prediction 1 rna-seconday-structure 1 rnafold 1 spot-rna 1 tertiary-interactions 1 blstm-neural-networks 1 bprna-dataset 1 ensemble-model 1 machine-learning 1