GitHub topics: direct-coupling-analysis

Pytorch implementation of adabmDCA

Language: Python - Size: 13.1 MB - Last synced at: 20 days ago - Pushed at: 20 days ago - Stars: 6 - Forks: 1

adabmDCA 2.0 – a flexible but easy-to-use package for Direct Coupling Analysis

Size: 26.4 KB - Last synced at: 23 days ago - Pushed at: 5 months ago - Stars: 6 - Forks: 0

Improved RNA Secondary Secondary Structure Prediction using Evolutionary Profile, Mutational Coupling and Two-dimensional Transfer Learning

Language: Perl - Size: 185 MB - Last synced at: 7 months ago - Pushed at: about 4 years ago - Stars: 25 - Forks: 8

Multivariate Gaussian Direct Coupling Analysis for residue contact prediction in protein families - Julia module

Language: Julia - Size: 659 KB - Last synced at: 2 months ago - Pushed at: over 3 years ago - Stars: 22 - Forks: 12

Source code for the paper "Fast and Accurate Inference of Gene Regulatory Networks through Robust Precision Matrix Estimation", by Passemiers et al.

Language: Python - Size: 165 MB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 6 - Forks: 0

Language: Python - Size: 149 MB - Last synced at: over 1 year ago - Pushed at: almost 5 years ago - Stars: 0 - Forks: 0

A Fully Automatic Method for Predicting Contact Maps of RNAs by Evolutionary Coupling Analysis

Language: Python - Size: 475 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 8 - Forks: 2

Small utility package to compute statistical observable from FASTA multiple sequence alignments.

Language: Julia - Size: 188 KB - Last synced at: 4 days ago - Pushed at: over 4 years ago - Stars: 3 - Forks: 0

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