GitHub topics: rna-structural-analysis
syseitz/RNAtedistance
Calculating Tree Edit Distance for RNA Structures in Dot Bracket Notation
Language: C - Size: 546 KB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 0 - Forks: 0
JLP-BioInf/rnaCrosslinkNF
Pre-processing pipeline for RNA crosslinking and High throughput sequencing data.
Language: R - Size: 38.8 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 2 - Forks: 0
FelixErnst/Structstrings
:package: Structstrings: implementation of Biostrings to work with dot bracket annotations
Language: R - Size: 399 KB - Last synced at: 20 days ago - Pushed at: 8 months ago - Stars: 5 - Forks: 0
marangiop/diff_BUM_HMM
Bayesian modelling approach for detecting RNA flexibility changes in high-throughput structure probing data under different conditions, based on an extension of the BUM-HMM method.
Language: HTML - Size: 101 MB - Last synced at: 3 months ago - Pushed at: over 2 years ago - Stars: 11 - Forks: 1
s-will/LocARNA
Alignment of RNAs
Language: C++ - Size: 20.8 MB - Last synced at: 3 months ago - Pushed at: 11 months ago - Stars: 24 - Forks: 4
jaswindersingh2/SPOT-RNA
RNA Secondary Structure Prediction using an Ensemble of Two-dimensional Deep Neural Networks and Transfer Learning.
Language: Perl - Size: 6.82 MB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 81 - Forks: 30
bgruening/galaxy-rna-structural-analysis
Galaxy flavor for RNA structural analysis
Language: Dockerfile - Size: 220 KB - Last synced at: 3 months ago - Pushed at: over 4 years ago - Stars: 1 - Forks: 2
