GitHub topics: cardiac-segmentation
kamruleee51/TAM
We propose a scalable Temporal Attention Module (TAM) to inject cardiac motion information into segmentation models. TAM captures dynamic changes across temporal frames using multi-headed, cross-temporal attention. It is adaptable across imaging modalities, scalable from 2D to 3D, and adds minimal computational overhead.
Size: 59.6 KB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 0 - Forks: 0
AlaaLab/ETAB
[ NeurIPS 2022 ] Official Codebase for "ETAB: A Benchmark Suite for Visual Representation Learning in Echocardiography"
Language: Jupyter Notebook - Size: 5.56 MB - Last synced at: 3 days ago - Pushed at: over 2 years ago - Stars: 27 - Forks: 11
arkanandi/Cardiac_Segmentation_ACDC
Deep learning based cardiac segmentation
Language: Python - Size: 23.4 KB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 5 - Forks: 0
JesusGuzmanMX/SYSCARDIO
Part of Intelligent system for assisted medical diagnosis (SYSCARDIO)
Language: Python - Size: 39.4 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 0 - Forks: 0
kyle-paul/RotCAtt-TransUNet-plusplus
Novel Deep Neural Network for Sophisticated Cardiac Segmentation - SOTA
Language: Jupyter Notebook - Size: 28.6 MB - Last synced at: 7 months ago - Pushed at: 7 months ago - Stars: 0 - Forks: 0
VinAIResearch/3D-UCaps
3D-UCaps: 3D Capsules Unet for Volumetric Image Segmentation (MICCAI 2021)
Language: Python - Size: 205 KB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 68 - Forks: 14
VISEF-ISEF-team/VHSCDD
Cardiovascular Volumetric Dataset With 12 Labelled Segmentation and 12 Labelled Diseases
Size: 19.4 MB - Last synced at: 11 months ago - Pushed at: 12 months ago - Stars: 1 - Forks: 0
VISEF-ISEF-team/VascuIAR
VasculAR - Integration of Deep Learning into automatic volumetric cardiovascular dissection and reconstruction in simulated 3D space for medical practice
Language: Python - Size: 3.01 GB - Last synced at: 11 months ago - Pushed at: 12 months ago - Stars: 4 - Forks: 1
dandycodingpipe/miniProject_IS2CM010
This mini-project was developed in 3-weeks to test our understanding of mathematical morphology, and other techniques such as histogram transformations, and their role in medical image processing.
Language: Python - Size: 1.22 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0
naamiinepal/synthetic-boost
Synthetic Boost: Leveraging Synthetic Data for Enhanced Vision-Language Segmentation in Echocardiography
Language: Python - Size: 3.16 MB - Last synced at: 12 months ago - Pushed at: about 1 year ago - Stars: 2 - Forks: 0
RonaldGalea/imATFIB
Work done during the imATFIB project, within the IMOGEN research insitute.
Language: Python - Size: 746 KB - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 1 - Forks: 2
TFboys-lzz/MPSCL
This repository contains code for the paper "Margin Preserving Self-paced Contrastive Learning Towards Domain Adaptation for Medical Image Segmentation", published at IEEE JBHI 2022
Language: Python - Size: 34.2 KB - Last synced at: over 1 year ago - Pushed at: almost 3 years ago - Stars: 22 - Forks: 1
baumgach/acdc_segmenter
Public code for our submission to the 2017 ACDC Cardiac Segmentation challenge
Language: Python - Size: 222 KB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 92 - Forks: 37
drkarim/lassy
A C++ library for 3D image investigation using surface normal profiles
Language: Jupyter Notebook - Size: 4.7 MB - Last synced at: over 1 year ago - Pushed at: over 6 years ago - Stars: 2 - Forks: 2
vuptran/cardiac-segmentation
Convolutional Neural Networks for Cardiac Segmentation
Language: Python - Size: 225 MB - Last synced at: over 1 year ago - Pushed at: almost 8 years ago - Stars: 106 - Forks: 41
DGWhittaker/Rat-FK3V-files
Rat Fenton-Karma C code and 3D DTI-based geometry files
Language: C - Size: 59.2 MB - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 3 - Forks: 2
INSIGNEO/MA-SOCRATIS
Multi-Atlas - Segmentation Of Cardiac Regions And Total Ifarct Scar (MA-SOCRATIS) is an unsupervised automatic pipeline that is capable of segmenting ventricular myocardium and scar from late gadolinium enhanced MR images (LGE-MRI) of left ventricle
Language: Makefile - Size: 43.5 MB - Last synced at: about 1 month ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 2
JeyzerMC/cardiac-segmentation Fork of vuptran/cardiac-segmentation
Convolutional Neural Networks for Cardiac Segmentation
Language: Python - Size: 226 MB - Last synced at: over 1 year ago - Pushed at: almost 7 years ago - Stars: 0 - Forks: 0
pianoza/LayerEnsembles
The source code for the Layer Ensembles paper published in MICCAI 2022 (Singapore).
Language: Python - Size: 717 KB - Last synced at: over 1 year ago - Pushed at: almost 3 years ago - Stars: 20 - Forks: 0
conflick0/CardiacSeg
cardiac segmentation
Language: Jupyter Notebook - Size: 237 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0
conflick0/CardiacLab
cardiac segmentation with 3d slicer
Language: Python - Size: 8.2 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 2 - Forks: 0
Cardiac-MR-Group-Lund/segment-open
Segment Source Distribution
Language: MATLAB - Size: 262 MB - Last synced at: about 2 years ago - Pushed at: over 2 years ago - Stars: 57 - Forks: 30
sulaimanvesal/PointCloudUDA
[IEEE-TMI 2021] This is our PyTorch implementation for Adapt Everywhere paper on unsupervised domain adaptation using entropy and point-cloud paper.
Language: Python - Size: 431 MB - Last synced at: about 2 years ago - Pushed at: over 2 years ago - Stars: 21 - Forks: 3
shangqigao/BayeSeg
The official implementation of "Joint Modeling of Image and Label Statistics for Enhancing Model Generalizability of Medical Image Segmentation" via Pytorch
Language: Python - Size: 164 KB - Last synced at: about 2 years ago - Pushed at: over 2 years ago - Stars: 16 - Forks: 3
KibromBerihu/LFBNet
This repository implements a robust deep learning method (LFBNet) for medical image segmentation using a two systems approach. Learning fast and slow strategy for robust medical image analysis.
Language: Python - Size: 279 KB - Last synced at: about 2 years ago - Pushed at: almost 3 years ago - Stars: 2 - Forks: 0
fshnkarimi/Cardiac-Detection
Predict a bounding box around the heart in X-ray images.
Language: Jupyter Notebook - Size: 451 KB - Last synced at: about 2 years ago - Pushed at: almost 3 years ago - Stars: 3 - Forks: 0
ayanglab/HDL
This is the official implementation of our proposed HDL
Language: Python - Size: 1.59 MB - Last synced at: about 2 years ago - Pushed at: about 3 years ago - Stars: 2 - Forks: 0
bragancas/VNet_PyTorch-Atriaseg2018
An image segmentation project using PyTorch to segment the Left Atrium in 3D Late gadolinium enhanced - cardiac MR images of the human heart.
Language: Python - Size: 23.8 MB - Last synced at: about 2 years ago - Pushed at: almost 4 years ago - Stars: 4 - Forks: 2
sulaimanvesal/CardiacQuanNet
[IEEE-JBHI 2020] TensorFlow/Keras implementation: Spatio-temporal Multi-task Learning for Cardiac MRI Left Ventricle Quantification
Size: 5.46 MB - Last synced at: about 2 years ago - Pushed at: about 4 years ago - Stars: 4 - Forks: 1
glee1228/Cardiac_segmentation
Cardiac_segmentation based on 3D Convolution Neural Network with SE blocks
Language: Python - Size: 1.31 MB - Last synced at: about 2 years ago - Pushed at: almost 6 years ago - Stars: 2 - Forks: 1
CellSMB/RyR-simulator
Open-source code for simulating anatomically realistic distributions of RyR clusters in relation to cardiac cell contractile machinery.
Language: R - Size: 284 MB - Last synced at: about 1 month ago - Pushed at: over 7 years ago - Stars: 1 - Forks: 2
ol-sen/medreaders
Readers for medical imaging datasets
Language: Python - Size: 210 KB - Last synced at: 8 days ago - Pushed at: almost 4 years ago - Stars: 0 - Forks: 0
RutwikP/Generalizing-Cardiac-Image-Segmentation-
Building Machine Learning models that generalize cardiac image segmentation using various MRI scans collected from different clinical centres.
Language: Jupyter Notebook - Size: 892 KB - Last synced at: about 2 years ago - Pushed at: about 4 years ago - Stars: 0 - Forks: 0
pranavphoenix/Optimizer-lr-tuning
Analyze the performance of 7 optimizers by varying their learning rates
Language: Jupyter Notebook - Size: 342 KB - Last synced at: almost 2 years ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0
