Ecosyste.ms: Repos

An open API service providing repository metadata for many open source software ecosystems.

GitHub topics: ecological-models

PoisotLab/BioEnergeticFoodWebs.jl

A unified interface for simulations of the Bio-Energetic model on food webs

Language: Julia - Size: 2.57 MB - Last synced: 28 days ago - Pushed: about 2 years ago - Stars: 27 - Forks: 14

florianhartig/BayesianTools

General-Purpose MCMC and SMC Samplers and Tools for Bayesian Statistics

Language: R - Size: 3.85 MB - Last synced: 9 days ago - Pushed: 4 months ago - Stars: 113 - Forks: 29

ConFooBio/gmse

An R package for simulating Generalised Management Strategy Evaluation

Language: TeX - Size: 283 MB - Last synced: 2 months ago - Pushed: 2 months ago - Stars: 10 - Forks: 5

Rekyt/funrar

:package: R package to compute functional rarity indices (functional distinctiveness, uniqueness, restrictedness, scarcity)

Language: R - Size: 5.37 MB - Last synced: 13 days ago - Pushed: about 1 month ago - Stars: 16 - Forks: 1

bradduthie/bradduthie.github.io

Personal website

Language: HTML - Size: 325 MB - Last synced: 2 months ago - Pushed: 2 months ago - Stars: 0 - Forks: 0

OrHostezky/adaptation-in-serial-dilution-co-culture

Large-scale implementation (using the Split-Apply-Combine paradigm) of different metabolic adaptation models of species in a 2-species co-culture, based on a Consumer-Resource modeling framework in a Serial-Dilution setup, where species compete for nutrients that are supplied periodically.

Language: MATLAB - Size: 2.42 MB - Last synced: 3 months ago - Pushed: 3 months ago - Stars: 1 - Forks: 0

gemmagerber/autoLIMR

Automated Translation of Network Data into Declaration Files Compatible with LIM and limSolve

Language: R - Size: 3.05 MB - Last synced: 3 months ago - Pushed: 3 months ago - Stars: 0 - Forks: 1

lreis2415/SEIMS

Spatially Explicit Integrated Modeling System --- open-source, cross-platform, and high performance computation

Language: C++ - Size: 52.4 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 48 - Forks: 34

bradduthie/PolyInbreed

Individual-based model for the evolution of polyandry and inbreeding

Language: R - Size: 59.6 KB - Last synced: 7 months ago - Pushed: over 7 years ago - Stars: 0 - Forks: 0

bradduthie/Duthie_and_Falcy_2013

C code to run individual-based model in Duthie and Falcy (2013)

Language: C - Size: 14.6 KB - Last synced: 7 months ago - Pushed: about 8 years ago - Stars: 0 - Forks: 1

bradduthie/EcoEdu

An educational tool for understanding ecological models of population dynamics

Language: HTML - Size: 4.99 MB - Last synced: 7 months ago - Pushed: over 5 years ago - Stars: 2 - Forks: 0

bradduthie/Inbreeding

Population genetic model of polygynous biparental inbreeding with no polyandry

Language: C - Size: 32.2 KB - Last synced: 7 months ago - Pushed: over 7 years ago - Stars: 2 - Forks: 0

EccRiley/CommPsy-SysLitRvw

Conducting a Community-Psychology-Focused & Action-Oriented Systematic Literature Review using R, SQL, & Git

Language: HTML - Size: 973 MB - Last synced: 9 months ago - Pushed: over 6 years ago - Stars: 0 - Forks: 0

jelletreep/patch-dispersal

Supplemental code for the paper: "Seed dispersal as a search strategy: dynamic and fragmented landscapes select for multi-scale movement strategies in plants" in Movement Ecology 2021

Language: MATLAB - Size: 721 KB - Last synced: 4 months ago - Pushed: about 3 years ago - Stars: 1 - Forks: 0

PLJV/OpenIMBCR

Various work with Integrated Monitoring in Bird Conservation Regions (IMBCR) data and analyses

Language: R - Size: 595 KB - Last synced: 4 months ago - Pushed: almost 5 years ago - Stars: 1 - Forks: 0

elkalexno/ENM

Products_ENM

Size: 7.89 MB - Last synced: 4 months ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0

cmerow/rangeModelMetadata

Language: R - Size: 13.2 MB - Last synced: 4 months ago - Pushed: 7 months ago - Stars: 5 - Forks: 1

Pyrofoux/vivarium

Environnement de simulation multi-agent avec un paradigme écologoiquement valide. Basé sur SimplePlaygrounds.

Language: Python - Size: 3.22 MB - Last synced: 4 months ago - Pushed: over 3 years ago - Stars: 1 - Forks: 0

LukeEcomod/APES_Jan2016

APES (Atmosphere - Plant - Exchange Simulator) codes in Matlab

Size: 9.01 MB - Last synced: 5 months ago - Pushed: over 2 years ago - Stars: 2 - Forks: 2

egouldo/EcolModellingQRPs

A Literature Review of Questionable Research Practices in Ecological Modelling for Decisions

Language: TeX - Size: 746 KB - Last synced: about 1 year ago - Pushed: almost 4 years ago - Stars: 0 - Forks: 0

OdilonVieira/chamaeza_distribution

Data used in: "Estudo da distribuição do gênero chamaeza no estado do Rio de Janeiro"

Language: R - Size: 29.3 KB - Last synced: 4 months ago - Pushed: about 4 years ago - Stars: 1 - Forks: 0

jcdterry/PredictingMissingLinks

Code for 'Finding missing links in interaction networks' paper

Size: 133 MB - Last synced: about 1 year ago - Pushed: about 4 years ago - Stars: 0 - Forks: 0

SteveViss/Talk_alien

FR Talk - Teaser of the alien R package (https://github.com/TheoreticalEcosystemEcology/alien)

Language: HTML - Size: 48.7 MB - Last synced: about 1 year ago - Pushed: almost 7 years ago - Stars: 1 - Forks: 1

ValentinaPeona/Afitool

Afit software for the analysis of fitness and invasiviness of Aphid insects

Size: 509 KB - Last synced: 4 months ago - Pushed: about 7 years ago - Stars: 1 - Forks: 0

JJ-Lab/Lotka-Volterra_Model

Predator-Prey Models using LV models

Size: 0 Bytes - Last synced: about 1 year ago - Pushed: about 7 years ago - Stars: 0 - Forks: 0

JJ-Lab/Modelo-generalizado

Evolutive general ecological model

Language: Jupyter Notebook - Size: 92.8 KB - Last synced: about 1 year ago - Pushed: almost 7 years ago - Stars: 0 - Forks: 0

Related Keywords
ecological-models 26 ecology 9 ecological-modelling 6 agent-based-modeling 4 r 4 simulation 4 evolution 3 evolutionary-algorithms 2 literature-review 2 data-visualization 2 statistics 2 ecological-niche-modelling 2 species-distribution-modelling 2 r-package 2 python 2 optimization 2 questionable-research-practices 1 dispsersal 1 violence 1 sql 1 social-sciences 1 rstats 1 rqda 1 research-methods 1 fitness 1 lgbt 1 igraph 1 ggplot2 1 community-science 1 population 1 popgen 1 teaching 1 shiny 1 lotka-volterra 1 educational 1 biology-lab-protocols 1 plant 1 habitat 1 autocorrelation 1 insect 1 reproducibility 1 decisions 1 transpiration 1 photosynthesis 1 fluxnet 1 bryophytes 1 renforcement-learning 1 reproducibility-crisis 1 researcher-degrees 1 biogeography 1 ecological-emergency 1 biology 1 ai 1 species-distributions 1 ornithology 1 ecological-metadata-language 1 ornitologia 1 network 1 prediction 1 earth-science 1 aphids 1 birds 1 utrecht-university 1 science 1 educators 1 biostatistics 1 traits 1 rarity 1 wildlife-management 1 population-model 1 management-strategy-evaluation 1 management-decisions 1 genetic-algorithms 1 genetic-algorithm 1 game-theory 1 food-security 1 conservation 1 conflict-resolution 1 conflict 1 agricultural-modelling 1 adaptive-management 1 systems-biology 1 smc 1 mcmc 1 cran 1 bayes 1 population-dynamics 1 food-webs 1 biomass 1 seims 1 parallel-computing 1 openmp 1 mpi 1 integrated-development-environment 1 hydrology 1 hydrologic-modeling 1 geo-computation 1 distributed 1 bmps-scenario 1 networks 1