MrGiovanni/RadGPT

AbdomenAtlas 3.0 (9,262 CT volumes + medical reports). These “superhuman” reports are more accurate, detailed, standardized, and generated faster than traditional human-made reports.

Language: Python - Size: 11.5 MB - Last synced at: 2 days ago - Pushed at: 14 days ago - Stars: 69 - Forks: 1

myztery-neuroimg/pons.myztery

Why should radiologists rely on eyesight alone, when computer vision and amazing open-source processing frameworks are already available

Language: Shell - Size: 644 KB - Last synced at: 8 days ago - Pushed at: 8 days ago - Stars: 0 - Forks: 0

freesurfer/samseg

Sequence Adaptive Multimodal SEGmentation (SAMSEG)

Language: C++ - Size: 81.1 MB - Last synced at: 9 days ago - Pushed at: 9 days ago - Stars: 11 - Forks: 5

wurenkai/MHA-UNet

[arXiv] The official code for "Only Positive Cases: 5-fold High-order Attention Interaction Model for Skin Segmentation Derived Classification".

Language: Python - Size: 17.6 MB - Last synced at: 26 days ago - Pushed at: 26 days ago - Stars: 32 - Forks: 2

jcreinhold/lesion-metrics

metrics for evaluating lesion segmentations

Language: Python - Size: 93.8 KB - Last synced at: 30 days ago - Pushed at: about 3 years ago - Stars: 3 - Forks: 1

marbarrantescepas/MS-preprocessing

Preprocessing pipeline for MS sMRI data, includes: lesion segmentation, lesion filling, FreeSurfer, and multiple quality checks.

Language: Shell - Size: 293 KB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 0 - Forks: 0

edaaydinea/Predictive-Modeling-of-Multiple-Sclerosis-Risk-in-CIS-Patients

Language: Jupyter Notebook - Size: 20.5 KB - Last synced at: about 1 month ago - Pushed at: 8 months ago - Stars: 6 - Forks: 1

mohamed-ladjal-AI/PixelMed

This repository contains the code for an AI-Based Universal Lesion Segmentation application based on my master's thesis. It includes a deep learning model for CT scan segmentation, a web interface built with Vite and React, and a Flask server for backend support.

Language: Python - Size: 186 MB - Last synced at: about 2 months ago - Pushed at: 2 months ago - Stars: 0 - Forks: 0

kwanghwi242/A-new-segmentation-model

The official code for "LiteMamba-Bound: A lightweight Mamba-based model with boundary-aware and normalized active contour loss for skin lesion segmentation"

Size: 1000 Bytes - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0

sfu-mial/DermSynth3D

Official code for "DermSynth3D: Synthesis of in-the-wild Annotated Dermatology Images". A data generation pipeline for creating photorealistic in-the-wild synthetic dermatalogical data with rich multi-task annotations for various skin-analysis tasks.

Language: Jupyter Notebook - Size: 287 MB - Last synced at: 4 days ago - Pushed at: 10 months ago - Stars: 27 - Forks: 4

LongxiZhou/DLPE-method

A comprehensive platform for analyzing pulmonary parenchyma lesions on chest CT.

Language: Python - Size: 20.7 MB - Last synced at: about 1 month ago - Pushed at: almost 3 years ago - Stars: 16 - Forks: 7

Ramanujam-N/MedLesSynth-LD

MedLesSynth-LD : Lesion Synthesis using Physics-Based Noise Models for Robust Lesion Segmentation in Low-Data Medical Imaging Regimes

Language: Python - Size: 7.74 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 0 - Forks: 0

CSIM-Toolkits/Slicer-LesionSpotlightExtension

3D Slicer extension that provides T2-FLAIR MRI manipulation methods in order to increase contrast and segment hyperintense Multiple Sclerosis lesions

Language: Python - Size: 15.8 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 2 - Forks: 2

v-sundaresan/truenet

DL tool for white matter hyperintensities segmentation

Language: Python - Size: 94.5 MB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 11 - Forks: 5

mkang315/ASF-YOLO

Official implementation of "ASF-YOLO: A Novel YOLO Model with Attentional Scale Sequence Fusion for Cell Instance Segmentation".

Language: Python - Size: 253 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 46 - Forks: 2

lchdl/DeepWMH

DeepWMH: Annotation-free white matter hyperintensity (WMH) lesion segmentation tool using deep learning.

Language: Python - Size: 1.86 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 10 - Forks: 1

wurenkai/MHorUNet

[BSPC] The official code for "MHorUNet: High-order spatial interaction UNet for skin lesion segmentation".

Language: Python - Size: 2.68 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 7 - Forks: 0

pramod-zillella/Skin-Lesion-Segmentation

Fully automatic skin lesion segmentation using the Berkeley wavelet transform and UNet algorithm.

Language: Jupyter Notebook - Size: 4.45 MB - Last synced at: about 1 month ago - Pushed at: almost 4 years ago - Stars: 11 - Forks: 2

manideep2510/melanoma_segmentation

Segmentation of skin cancers on ISIC 2017 challenge dataset.

Language: Jupyter Notebook - Size: 99.1 MB - Last synced at: about 1 year ago - Pushed at: about 6 years ago - Stars: 50 - Forks: 21

Spawnfile/Covid-lung-lesion-segmentation

Deep learning models to lung lesion segmentation & classification on CT slices with pytorch.

Size: 1.95 KB - Last synced at: about 1 year ago - Pushed at: about 4 years ago - Stars: 0 - Forks: 0

Legit-Health/ASCORAD

Official development code of the Automatic Scoring of Atopic Dermatitis (ASCORAD) by Legit.Health 🩺🤖

Language: Python - Size: 3.06 MB - Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 15 - Forks: 1

han-liu/ModDropPlusPlus

Official PyTorch Implementation of ModDrop++ [MICCAI 2022 (early accept)]. A simple yet effective approach to tackle missing-modality problem for multi-modality medical imaging data.

Language: Python - Size: 21.2 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 9 - Forks: 2

tinymilky/TextSCF

TextSCF: LLM-Enhanced Image Registration Model

Language: Python - Size: 966 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 16 - Forks: 0

Confusezius/unet-lits-2d-pipeline

Liver Lesion Segmentation with 2D Unets

Language: Python - Size: 213 KB - Last synced at: over 1 year ago - Pushed at: almost 6 years ago - Stars: 87 - Forks: 25

b-wang/ActiveCut

Active learning-based interactive tool for semi-supervised image segmentation

Language: C++ - Size: 145 KB - Last synced at: 7 months ago - Pushed at: over 4 years ago - Stars: 8 - Forks: 2

MIMBCD-UI/dataset-uta7-heatmaps

[IJHCS] UTA7: a dataset of heatmaps and images resulted from computing the given abnormalities which were manually delineated by clinicians while annotating the breast cancer lesions.

Language: CSS - Size: 325 MB - Last synced at: about 1 year ago - Pushed at: over 4 years ago - Stars: 1 - Forks: 1

Pythonist-QuratUlAin/Automated-Preprocessing-and-Segmentation-of-skin-lesion

The Aim of research is to develop effective method of Lesion Segmentation from dermoscopic images. The Scope of research includes the Image pre-processing, Lesion localization and segmentation of Skin lesions (Melanoma, Nevus and Seborrheic Keratosis).

Size: 4.65 MB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0

Andrewsopoku/Skin-Lesion-Segmentation

Skin Lesion Segmentation

Language: MATLAB - Size: 22.8 MB - Last synced at: about 2 years ago - Pushed at: over 2 years ago - Stars: 2 - Forks: 0

nkicsl/Fundus_Review

Official website of our paper: Applications of Deep Learning in Fundus Images: A Review. Newly-released datasets and recently-published papers will be updated regularly.

Size: 6.66 MB - Last synced at: about 2 years ago - Pushed at: about 3 years ago - Stars: 72 - Forks: 10

alexklwong/subpixel-embedding-segmentation

PyTorch Implementation of Small Lesion Segmentation in Brain MRIs with Subpixel Embedding (ORAL, MICCAIW 2021)

Language: Python - Size: 1.28 MB - Last synced at: about 2 years ago - Pushed at: almost 3 years ago - Stars: 23 - Forks: 4

rimshasaeed/lesion-segmentation

Breast ultrasound (BUS) image segmentation using region-growing algorithm

Language: MATLAB - Size: 4.08 MB - Last synced at: about 2 years ago - Pushed at: almost 3 years ago - Stars: 1 - Forks: 0

jcreinhold/lesionqc 📦

calculate quality metrics for lesion segmentation results

Language: Python - Size: 23.4 KB - Last synced at: about 2 years ago - Pushed at: about 4 years ago - Stars: 1 - Forks: 1

DaeSeokSong/ComputerVision

this repo's goal is an improvement in overall development capability about image processing

Language: Jupyter Notebook - Size: 18.9 MB - Last synced at: about 2 years ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0

inboxpraveen/Skin-cancer-lesion-detection

This repository contains skin cancer lesion detection models. These are trained on a sequential and a custom ResNet model

Language: Jupyter Notebook - Size: 2.19 MB - Last synced at: about 2 years ago - Pushed at: almost 6 years ago - Stars: 7 - Forks: 3

gogolB/Brain_Lesion_Segmetation

Project for UCSF 265

Language: Jupyter Notebook - Size: 1.05 MB - Last synced at: about 2 months ago - Pushed at: about 5 years ago - Stars: 3 - Forks: 0

jcreinhold/tiramisu-brulee

A 2D and 3D PyTorch implementation of the Tiramisu CNN

Language: Python - Size: 1.1 MB - Last synced at: 20 days ago - Pushed at: over 2 years ago - Stars: 5 - Forks: 2

antoine-moulin/segmentation-of-skin-lesion-using-DL

Skin lesion segmentation with a U-Net, using the dataset from ISIC challenge 2018.

Language: Python - Size: 80.4 MB - Last synced at: about 2 years ago - Pushed at: over 5 years ago - Stars: 1 - Forks: 1

v-sundaresan/omnisup_agepred_semidann

Omni-supervised domain adversarial training for WM hyperintensity segmentation

Language: Python - Size: 74.2 KB - Last synced at: about 2 years ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 0

lucabergamini/swine-lesion-scoring

Segmentation Guided Scoring of Pathological Lesions in Swine Through CNNs

Language: Python - Size: 1.34 MB - Last synced at: about 2 years ago - Pushed at: over 5 years ago - Stars: 1 - Forks: 1