Ecosyste.ms: Repos

An open API service providing repository metadata for many open source software ecosystems.

GitHub topics: metabolic-networks

Waschina/cobrar

COnstraint-based Reconstruction and Analysis (COBRA) of metabolic networks in R

Language: R - Size: 1.22 MB - Last synced: about 8 hours ago - Pushed: about 9 hours ago - Stars: 2 - Forks: 0

pregnault/samplelim

MCMC sampling algorithms for linear inverse models in R

Language: C++ - Size: 20.7 MB - Last synced: 3 days ago - Pushed: 3 days ago - Stars: 0 - Forks: 0

sysbiolux/ISB705MetabolicNetworkModeling

Language: HTML - Size: 332 MB - Last synced: 9 days ago - Pushed: 9 days ago - Stars: 0 - Forks: 0

sysbiolux/AKR1A1-Deficiency

Language: MATLAB - Size: 317 MB - Last synced: 17 days ago - Pushed: 17 days ago - Stars: 0 - Forks: 0

cnapy-org/CNApy

An integrated visual environment for metabolic modeling with common methods such as FBA, FVA and Elementary Flux Modes, and advanced features such as thermodynamic methods, extended Minimal Cut Sets, OptKnock, RobustKnock, OptCouple and more!

Language: Python - Size: 6.92 MB - Last synced: 15 days ago - Pushed: 16 days ago - Stars: 41 - Forks: 7

tubanlee/MM

Infer metabolic directions from moment differences of mass-weighted intensity distributions

Language: R - Size: 4.17 MB - Last synced: 3 months ago - Pushed: 3 months ago - Stars: 186 - Forks: 14

sysbiolux/GliomaGEM

Glioma metabolic modelling for repurposing of single and combination drugs

Language: R - Size: 25 MB - Last synced: 5 months ago - Pushed: 5 months ago - Stars: 0 - Forks: 0

sysbiolux/scFASTCORMICS

Language: MATLAB - Size: 717 MB - Last synced: 6 months ago - Pushed: 6 months ago - Stars: 0 - Forks: 0

sysbiolux/rFASTCORMICS

Language: MATLAB - Size: 108 MB - Last synced: 6 months ago - Pushed: 6 months ago - Stars: 4 - Forks: 0

sysbiolux/NutriHuMiX

Size: 8.5 MB - Last synced: 6 months ago - Pushed: 6 months ago - Stars: 0 - Forks: 0

Robaina/Netflowpy

A python tool to optimize chemical concentration trajectories in network-based chemical systems

Language: Python - Size: 655 KB - Last synced: about 1 year ago - Pushed: over 1 year ago - Stars: 3 - Forks: 0

MateJozsaPhys/CNDinvestigation

Opportunities and challenges in partitioning the graph measure space of real-world networks

Language: Jupyter Notebook - Size: 7.82 MB - Last synced: about 1 year ago - Pushed: over 3 years ago - Stars: 0 - Forks: 0

Related Keywords
metabolic-networks 12 paper 4 metabolic-models 3 cobra 2 metabolic-engineering 2 computational-biology 2 bioinformatics 2 complex-networks 1 brain-networks 1 affiliation-networks 1 python 1 optimization 1 metabolism 1 linear-programming 1 dynamical-systems 1 chemistry 1 chemical-networks 1 alternative-optima 1 moments 1 moment 1 metabolomics 1 feature-extraction 1 feature-selection 1 igraph 1 machine-learning 1 network-analysis 1 network-classification 1 network-measures 1 networks 1 networkx 1 ppi-networks 1 relevant-feature-analysis 1 skewed-data 1 social-networks 1 transportation-networks 1 unbalanced-datasets 1 web-networks 1 billard-walk 1 cran 1 lim 1 mcmc 1 mirror-walk 1 polytope 1 random-walk 1 sampling 1 trophic-networks 1 urban-networks 1 teaching 1 constraint-based-analysis 1 constraint-based-modeling 1 constraint-based-reconstruction 1 constraint-programming 1 fba 1 flux-balance-analysis 1 flux-variability 1 fva 1 metabolic-reconstruction 1 sbml 1 stoichiometric-modeling 1 systems-biology 1 annotations 1 mass-spectra 1 mass-spectrometry 1 mass-spectrometry-data 1 mass-spectrum 1 metabolic-flux-analysis 1 metabolic-network 1 metabolic-pathways 1