GazzolaLab/MiV-Simulator

Bio-physical neural network simulator for Mind-in-Vitro

Language: Python - Size: 3.95 MB - Last synced at: 4 days ago - Pushed at: 4 days ago - Stars: 3 - Forks: 6

BlueBrain/neurodamus 📦

A BBP Simulation Control application for NEURON

Language: Python - Size: 17.3 MB - Last synced at: 16 days ago - Pushed at: 2 months ago - Stars: 10 - Forks: 9

c2m2/Neuro-VISOR

A research tool based in virtual reality. Produced by the Center for Computational Mathematics and Modeling at Temple University

Language: C# - Size: 596 MB - Last synced at: about 1 month ago - Pushed at: 8 months ago - Stars: 11 - Forks: 12

gordonkoehn/nexus

Investigating the performance of a cross-correlation method of inferring functional connectivity in adaptive-exponential integrate and fire (aEIF) neuron model on small-scale neuronal networks of different activity patterns (synchronous & regular / asynchronous & regular) and topologies (random / scale-free).

Language: Jupyter Notebook - Size: 10.1 MB - Last synced at: 4 days ago - Pushed at: about 2 years ago - Stars: 1 - Forks: 0

PridaLab/LCN-HippoModel

The LCN-HippoModel is a biophysically realistic model of CA1 pyramidal cells aimed to get novel insights on firing dynamics in deep and superficial populations during the theta rhythm.

Language: Python - Size: 7.6 MB - Last synced at: 3 months ago - Pushed at: almost 3 years ago - Stars: 6 - Forks: 0

raminmh/SIM-CE

SIM-CE is an advanced, user-friendly modeling and simulation environment in Simulink, for performing multi-scale behavioral analysis of the nervous system of Caenorhabditis elegans (C. elegans).

Size: 5.32 MB - Last synced at: 28 days ago - Pushed at: over 7 years ago - Stars: 3 - Forks: 1

aldomann/neuronsim

FREs and QIF neurons simulations

Language: R - Size: 282 KB - Last synced at: 5 months ago - Pushed at: over 4 years ago - Stars: 1 - Forks: 0

mcellteam/neuron_launcher

Set of tools in Blender to create models for MCell/Neuron hybrid simulations

Language: C++ - Size: 11.8 MB - Last synced at: 22 days ago - Pushed at: over 3 years ago - Stars: 7 - Forks: 2

likchun/Final-year-project 📦

Final Year Project, Autumn 2021

Language: Python - Size: 28.6 MB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 0

Kolelab/optimization-tools

nFit - an application to automatically generate and optimize neuron models.

Language: AMPL - Size: 253 KB - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0

jajcayn/interactive-spiking-neuron-model

Interactive spiking neuron models

Language: Python - Size: 299 KB - Last synced at: 2 months ago - Pushed at: about 5 years ago - Stars: 1 - Forks: 0

ChaitanyaK77/Decoding_Neural_Architecture

Language: Jupyter Notebook - Size: 7.81 KB - Last synced at: about 2 months ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

ninadakolekar/mod2nml 📦

NMODL to NeuroML Language Translator

Language: Python - Size: 40 KB - Last synced at: almost 2 years ago - Pushed at: over 5 years ago - Stars: 2 - Forks: 1

axoaxonic/SpikingNeuronMusic

Exploring data sonification & generative sound synthesis/sequencing with spiking neuron models

Language: Python - Size: 22.4 MB - Last synced at: almost 2 years ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0

dervinism/thalamocortical1

Large-scale thalamocortical network model for simulating physiological and paroxysmal brain rhythms

Language: AMPL - Size: 301 KB - Last synced at: about 2 years ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0

CMU-CBML/NeuronTransportIGA

This package performs material transport simulation in the complex geometry of neurons using isogeometric analysis (IGA)

Language: C++ - Size: 17.5 MB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 4 - Forks: 1

Jaffar-Hussein/Neurone-Models

These are models that are used to study the spiking of the neurones organized according to their complexity from just considering the voltage to doing the ADEX model

Language: Jupyter Notebook - Size: 5.42 MB - Last synced at: about 2 months ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 1

takyamamoto/Nonlinear-Dynamics-with-Python

Python implimentation Nonlinear Dynamics Simulation

Language: Python - Size: 5.15 MB - Last synced at: about 2 years ago - Pushed at: almost 7 years ago - Stars: 1 - Forks: 1

CSDLLab/MPGAN

Using Simulated Training Data of Voxel-level Generative Model to Improve 3D Neuron Reconstruction

Language: Python - Size: 82.6 MB - Last synced at: 11 months ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 1

russelljjarvis/GENN_On_Jetson

A Basic Guide for configuring the Nvidia Jetson Nano for running the GENN Potjan et al cortical models developed by Knight et al.

Size: 41 KB - Last synced at: 2 months ago - Pushed at: almost 3 years ago - Stars: 0 - Forks: 1

aldomann/neuroscience

Simulations of the dynamics of neuronal ensembles using the model of FREs and QIF neurons.

Language: R - Size: 2.44 MB - Last synced at: 5 months ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0

MarcelBeining/T2N

T2N is an extension of the TREES toolbox providing an interface between Matlab and the compartmental modeling environment NEURON. It was published in (and should be cited this way): Beining M, Mongiat, LA, Schwarzacher SW, Cuntz H, Jedlicka P: T2N as a new tool for robust electrophysiological modeling demonstrated for mature and adult-born dentate granule cells. eLife 2017; 6:e26517

Language: MATLAB - Size: 20.2 MB - Last synced at: about 1 year ago - Pushed at: over 5 years ago - Stars: 8 - Forks: 3

royess/CUDAHines

A CUDA implement of Hines algorithm, which is used in neuron simulators. It is the final project of "Parallel and Distributed Computation" course, taught by Prof. Guojie Luo at PKU.

Language: TeX - Size: 272 KB - Last synced at: almost 2 years ago - Pushed at: almost 5 years ago - Stars: 0 - Forks: 0

csinva/axon-ap-propagation

Code for simulations of action potential propagation

Language: AMPL - Size: 7.56 MB - Last synced at: about 1 month ago - Pushed at: almost 8 years ago - Stars: 1 - Forks: 1

joey-kilgore/Basic_Neuron_Simulations

Creating Basic Neuron Simulations

Language: Jupyter Notebook - Size: 260 KB - Last synced at: about 2 months ago - Pushed at: over 6 years ago - Stars: 0 - Forks: 0

mobeets/psth-to-population

visualize how individual neuron PSTHs look in population space

Language: HTML - Size: 1.72 MB - Last synced at: 2 months ago - Pushed at: about 6 years ago - Stars: 2 - Forks: 0

Devrim-Celik/icg_trace_reverse_engineering

Reverse Engineering the Gate Composition given the Voltage Trace of a Gate

Language: Python - Size: 28.3 KB - Last synced at: over 1 year ago - Pushed at: over 7 years ago - Stars: 0 - Forks: 0