Ecosyste.ms: Repos
An open API service providing repository metadata for many open source software ecosystems.
GitHub topics: neuron-simulations
GazzolaLab/MiV-Simulator
Bio-physical neural network simulator for Mind-in-Vitro
Language: Python - Size: 3.83 MB - Last synced: 5 days ago - Pushed: 5 days ago - Stars: 3 - Forks: 4
BlueBrain/neurodamus
A BBP Simulation Control application for NEURON
Language: Python - Size: 11.7 MB - Last synced: 14 days ago - Pushed: 14 days ago - Stars: 8 - Forks: 5
c2m2/Neuro-VISOR
A research tool based in virtual reality. Produced by the Center for Computational Mathematics and Modeling at Temple University
Language: C# - Size: 596 MB - Last synced: 8 days ago - Pushed: 9 days ago - Stars: 8 - Forks: 7
mcellteam/neuron_launcher
Set of tools in Blender to create models for MCell/Neuron hybrid simulations
Language: C++ - Size: 11.8 MB - Last synced: 2 months ago - Pushed: over 2 years ago - Stars: 7 - Forks: 2
likchun/Final-year-project 📦
Final Year Project, Autumn 2021
Language: Python - Size: 28.6 MB - Last synced: 7 months ago - Pushed: over 2 years ago - Stars: 0 - Forks: 0
mobeets/psth-to-population
visualize how individual neuron PSTHs look in population space
Language: HTML - Size: 1.72 MB - Last synced: 8 months ago - Pushed: about 5 years ago - Stars: 2 - Forks: 0
Kolelab/optimization-tools
nFit - an application to automatically generate and optimize neuron models.
Language: AMPL - Size: 253 KB - Last synced: 8 months ago - Pushed: over 3 years ago - Stars: 0 - Forks: 0
jajcayn/interactive-spiking-neuron-model
Interactive spiking neuron models
Language: Python - Size: 299 KB - Last synced: 10 months ago - Pushed: over 4 years ago - Stars: 0 - Forks: 0
ninadakolekar/mod2nml 📦
NMODL to NeuroML Language Translator
Language: Python - Size: 40 KB - Last synced: 11 months ago - Pushed: over 4 years ago - Stars: 2 - Forks: 1
axoaxonic/SpikingNeuronMusic
Exploring data sonification & generative sound synthesis/sequencing with spiking neuron models
Language: Python - Size: 22.4 MB - Last synced: about 1 year ago - Pushed: about 1 year ago - Stars: 0 - Forks: 0
dervinism/thalamocortical1
Large-scale thalamocortical network model for simulating physiological and paroxysmal brain rhythms
Language: AMPL - Size: 301 KB - Last synced: over 1 year ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0
CMU-CBML/NeuronTransportIGA
This package performs material transport simulation in the complex geometry of neurons using isogeometric analysis (IGA)
Language: C++ - Size: 17.5 MB - Last synced: 10 months ago - Pushed: over 1 year ago - Stars: 4 - Forks: 1
PridaLab/LCN-HippoModel
The LCN-HippoModel is a biophysically realistic model of CA1 pyramidal cells aimed to get novel insights on firing dynamics in deep and superficial populations during the theta rhythm.
Language: Python - Size: 7.6 MB - Last synced: about 1 year ago - Pushed: almost 2 years ago - Stars: 6 - Forks: 0
gordonkoehn/nexus
Investigating the performance of a cross-correlation method of inferring functional connectivity in adaptive-exponential integrate and fire (aEIF) neuron model on small-scale neuronal networks of different activity patterns (synchronous & regular / asynchronous & regular) and topologies (random / scale-free).
Language: Jupyter Notebook - Size: 10.1 MB - Last synced: about 1 year ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0
Jaffar-Hussein/Neurone-Models
These are models that are used to study the spiking of the neurones organized according to their complexity from just considering the voltage to doing the ADEX model
Language: Jupyter Notebook - Size: 5.4 MB - Last synced: about 1 year ago - Pushed: about 2 years ago - Stars: 0 - Forks: 0
takyamamoto/Nonlinear-Dynamics-with-Python
Python implimentation Nonlinear Dynamics Simulation
Language: Python - Size: 5.15 MB - Last synced: over 1 year ago - Pushed: almost 6 years ago - Stars: 1 - Forks: 1
CSDLLab/MPGAN
Using Simulated Training Data of Voxel-level Generative Model to Improve 3D Neuron Reconstruction
Language: Python - Size: 82.6 MB - Last synced: 5 days ago - Pushed: 5 months ago - Stars: 1 - Forks: 1
russelljjarvis/GENN_On_Jetson
A Basic Guide for configuring the Nvidia Jetson Nano for running the GENN Potjan et al cortical models developed by Knight et al.
Size: 41 KB - Last synced: over 1 year ago - Pushed: about 2 years ago - Stars: 0 - Forks: 1
aldomann/neuronsim
FREs and QIF neurons simulations
Language: R - Size: 282 KB - Last synced: about 1 year ago - Pushed: over 3 years ago - Stars: 0 - Forks: 0
aldomann/neuroscience
Simulations of the dynamics of neuronal ensembles using the model of FREs and QIF neurons.
Language: R - Size: 2.44 MB - Last synced: about 1 year ago - Pushed: over 3 years ago - Stars: 0 - Forks: 0
MarcelBeining/T2N
T2N is an extension of the TREES toolbox providing an interface between Matlab and the compartmental modeling environment NEURON. It was published in (and should be cited this way): Beining M, Mongiat, LA, Schwarzacher SW, Cuntz H, Jedlicka P: T2N as a new tool for robust electrophysiological modeling demonstrated for mature and adult-born dentate granule cells. eLife 2017; 6:e26517
Language: MATLAB - Size: 20.2 MB - Last synced: about 1 month ago - Pushed: almost 5 years ago - Stars: 8 - Forks: 3
royess/CUDAHines
A CUDA implement of Hines algorithm, which is used in neuron simulators. It is the final project of "Parallel and Distributed Computation" course, taught by Prof. Guojie Luo at PKU.
Language: TeX - Size: 272 KB - Last synced: 11 months ago - Pushed: almost 4 years ago - Stars: 0 - Forks: 0
csinva/axon-ap-propagation
Code for simulations of action potential propagation
Language: AMPL - Size: 7.56 MB - Last synced: over 1 year ago - Pushed: about 7 years ago - Stars: 1 - Forks: 1
joey-kilgore/Basic_Neuron_Simulations
Creating Basic Neuron Simulations
Language: Jupyter Notebook - Size: 260 KB - Last synced: over 1 year ago - Pushed: almost 6 years ago - Stars: 0 - Forks: 0
Devrim-Celik/icg_trace_reverse_engineering
Reverse Engineering the Gate Composition given the Voltage Trace of a Gate
Language: Python - Size: 28.3 KB - Last synced: 10 months ago - Pushed: over 6 years ago - Stars: 0 - Forks: 0
raminmh/SIM-CE
SIM-CE is an advanced, user-friendly modeling and simulation environment in Simulink, for performing multi-scale behavioral analysis of the nervous system of Caenorhabditis elegans (C. elegans).
Size: 5.32 MB - Last synced: about 1 year ago - Pushed: almost 7 years ago - Stars: 2 - Forks: 1