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GitHub topics: biophysical-modeling

molcretb/GPyTool

GPyTool, a Bayesian framework developed to estimate the diffusive properties of a stochastic time trajectory

Language: Jupyter Notebook - Size: 236 KB - Last synced at: 27 days ago - Pushed at: 27 days ago - Stars: 1 - Forks: 0

NYU-DiffusionMRI/SMI

Toolbox for parameter estimation of the Standard Model of diffusion in white matter

Language: MATLAB - Size: 776 KB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 22 - Forks: 0

absanyal/filament_diffusion

Simulation of an FtsZ filament in C++

Language: C++ - Size: 78.1 KB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 0 - Forks: 0

miguelatienza/onedcellsim

Language: Python - Size: 405 KB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 1 - Forks: 0

jgomezdans/pangeos_uq

Materials for the PANGEOS Uncertainty Quantification workshop

Language: Jupyter Notebook - Size: 34.8 MB - Last synced at: about 4 hours ago - Pushed at: 7 months ago - Stars: 1 - Forks: 3

Henry-Sundland/Biophysics-Image-Analysis--Microfludics--Python---Analysis

These are python version of codes that I wrote to analyze images and videos of a macromolecule, that I took via fluorescence microscopy, in my research in grad school.

Language: Python - Size: 75.2 MB - Last synced at: 8 months ago - Pushed at: 8 months ago - Stars: 1 - Forks: 0

sanjayankur31/NeuroML-widgets

Jupyter widgets for use with NeuroML

Language: Python - Size: 41 KB - Last synced at: about 17 hours ago - Pushed at: 8 months ago - Stars: 0 - Forks: 0

Plant-Food-Research-Open/FieldNBalance

Nitrogen balance model components and test procedures

Language: Jupyter Notebook - Size: 164 MB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 2 - Forks: 4

ff-zhang/t-cell-response-encoder

Feed-forward neural network that predicts cytokine dynamics of T-cells in response to antigens

Language: Python - Size: 230 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 3 - Forks: 0

wri/charm-global-level

CHARM, a model that estimates the GHG impacts and land-use requirements of forestry

Language: Python - Size: 376 KB - Last synced at: about 1 year ago - Pushed at: almost 2 years ago - Stars: 10 - Forks: 0

jaber-jaber/BG_Modelling

Model of BG components to learn more about mechanisms of DBS

Language: Jupyter Notebook - Size: 5.74 MB - Last synced at: about 1 month ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

dervinism/thalamocortical1

Large-scale thalamocortical network model for simulating physiological and paroxysmal brain rhythms

Language: AMPL - Size: 301 KB - Last synced at: about 2 years ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0