GitHub topics: mechanistic-models

Repositories

AMICI-dev/AMICI

Advanced Multilanguage Interface to CVODES and IDAS

Language: C++ - Size: 210 MB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 120 - Forks: 31

jacintak/jacintak.github.io

My GitHub Page

Language: HTML - Size: 87.2 MB - Last synced at: 17 days ago - Pushed at: 17 days ago - Stars: 2 - Forks: 0

Damian-Oswald/master-thesis

Quarto source code for my master's thesis "Remote Sensing of Foliar Nitrogen in Californian Almonds" (2023)

Language: TeX - Size: 245 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 0 - Forks: 0

americocunhajr/CE-ABC

CE-ABC is a code to simulate the epidemic outbreaks with mechanistic models through a cross-entropy approximate Bayesian framework.

Language: MATLAB - Size: 68.1 MB - Last synced at: about 1 month ago - Pushed at: 2 months ago - Stars: 7 - Forks: 1

VaxSim is a python package for simulating the spread of Foot and Mouth Disease (FMD) using a discrete compartmental model (SIRSV framework), along with control interventions such as periodic pulsed vaccination campaigns.

Language: Python - Size: 23.2 MB - Last synced at: 9 days ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0

IhsanKhaliq/ascotraceR

A mechanistic model to simulate the spread of Ascochyta blight in a chickpea field

Language: R - Size: 7.1 MB - Last synced at: 11 days ago - Pushed at: over 2 years ago - Stars: 3 - Forks: 0

irmlma/mobility-simulation

Mechanistic individual mobility generation models with a synthetic dataset

Language: Python - Size: 9.16 MB - Last synced at: about 20 hours ago - Pushed at: 12 months ago - Stars: 2 - Forks: 0

JBris/prefect-surrogate-models

Demonstrating the use of Prefect to orchestrate the creation of machine learning surrogate models as applied to mechanistic crop models.

Language: HTML - Size: 7.11 MB - Last synced at: about 1 month ago - Pushed at: 7 months ago - Stars: 4 - Forks: 0

sybila/eBCSgen

eBCSgen - BioChemical Space Language support tool.

Language: JavaScript - Size: 4.12 MB - Last synced at: about 2 months ago - Pushed at: 6 months ago - Stars: 2 - Forks: 4

chrisborges/Neotropical-Language-Diversity-Simulator

Repository for the paper "High mountains, wide rivers: mechanisms that shaped the linguistic diversity patterns in the Neotropics"

Language: Python - Size: 32.2 KB - Last synced at: 7 months ago - Pushed at: 8 months ago - Stars: 0 - Forks: 0

AndrewIOM/bristlecone

An F# library for mechanistic modelling of ecological time series data

Language: F# - Size: 5.56 MB - Last synced at: 6 days ago - Pushed at: about 2 months ago - Stars: 8 - Forks: 1

andererka/SBI_for_EEG

Master thesis project in 2022, at the @mackelab: In this project, simulation based inference is used to infer micro-parameters of the brain

Language: Jupyter Notebook - Size: 737 MB - Last synced at: 11 months ago - Pushed at: almost 3 years ago - Stars: 0 - Forks: 0

FiammettaC/BioVL-Library-Julia

This work aims to explore the differences between Python and Julia and to propose a detailed overview of the best-suited applications for each language. The repository includes mechanistic models in both Python and Julia.

Language: Julia - Size: 688 KB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 2 - Forks: 0

Plant-Food-Research-Open/FieldNBalance

Nitrogen balance model components and test procedures

Language: Jupyter Notebook - Size: 164 MB - Last synced at: 12 months ago - Pushed at: 12 months ago - Stars: 2 - Forks: 4

paucablop/dotnet.fermentation.kinetic.models

Library with kinetic models to simulate microbial growth

Language: F# - Size: 40 KB - Last synced at: about 2 months ago - Pushed at: over 2 years ago - Stars: 2 - Forks: 0

paucablop/dotnet.fermentation.simulator

Simulate industrial fermentation processes and generate large data sets resembling real systems 🚀

Language: C# - Size: 198 KB - Last synced at: about 2 months ago - Pushed at: over 2 years ago - Stars: 3 - Forks: 0

jamesmbaazam/orv_modelling_review_epidemics

Mechanistic modelling of outbreak response interventions to human vaccine-preventable diseases: a systematic review of modelling practices before COVID-19

Language: TeX - Size: 5.75 MB - Last synced at: 3 days ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 1