Mauritia-flexuosa/IFFSC

Este repositório contém os dados e scripts para explorar a resposta da vegetação do Inventário Florístico Florestal de Santa Catarina a variação sazonal da chuva e da temperatura.

Language: R - Size: 8.92 MB - Last synced: about 12 hours ago - Pushed: about 13 hours ago - Stars: 0 - Forks: 0

aperiodik/Macrophenological-dynamics-paper

data and R code to reproduce the analysis and plots presented in the manuscript: "Macrophenological dynamics from citizen science plant occurrence data"

Language: R - Size: 41.6 MB - Last synced: 4 days ago - Pushed: 5 days ago - Stars: 0 - Forks: 1

phenology/springtime

Spatiotemporal phenology research with interpretable models

Language: Python - Size: 10.5 MB - Last synced: 5 days ago - Pushed: 12 days ago - Stars: 3 - Forks: 2

Digdgeo/Ndvi2Gif

Library to create Multi Seasonal remote sensing indexes composites

Language: Jupyter Notebook - Size: 13.7 MB - Last synced: 5 days ago - Pushed: 7 months ago - Stars: 26 - Forks: 10

cclaualc/synphen

Synthetic models for phenology in mutualistic networks

Language: Python - Size: 29.3 KB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 0 - Forks: 0

earthobservations/phenodata

An acquisition and processing toolkit for open access phenology data.

Language: Python - Size: 258 KB - Last synced: 5 days ago - Pushed: 8 months ago - Stars: 24 - Forks: 4

tdlan80/inv_plant_phen

repo for the EREN-NEON Biodiversity WK - invasive plant phenology

Language: R - Size: 25.4 KB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 0 - Forks: 0

ncsuSEAL/Bayesian_LSP

A Bayesian hierarchical model that quantifies long-term annual land surface phenology from sparse time series of vegetation indices.

Language: R - Size: 2.37 MB - Last synced: 14 days ago - Pushed: about 2 months ago - Stars: 41 - Forks: 11

satlawa/proj_time_series_analysis

Phenology of Georgia (Caucasus). Phenology is derived from NDVI (Modis satellite).

Language: Jupyter Notebook - Size: 10.4 MB - Last synced: 2 months ago - Pushed: over 2 years ago - Stars: 2 - Forks: 3

sagesteppe/ManuSCript

Writing my masters thesis for submission to Methods in Ecology and Evolution

Language: TeX - Size: 151 MB - Last synced: 2 months ago - Pushed: 2 months ago - Stars: 0 - Forks: 0

EOA-team/sentinel2_crop_traits

Sentinel-2 Crop Trait Retrieval Using Physiological and Phenological Priors from Field Phenotyping (Graf et al., 2023, RSE)

Language: Python - Size: 1.66 GB - Last synced: about 1 month ago - Pushed: 8 months ago - Stars: 17 - Forks: 4

eco-hydro/phenofit

R package: A state-of-the-art Vegetation Phenology extraction package, phenofit

Language: R - Size: 90.6 MB - Last synced: 7 days ago - Pushed: 4 months ago - Stars: 67 - Forks: 31

egiron/pywheat

Python library for simulation of wheat phenological development, crop growth and yield.

Language: Jupyter Notebook - Size: 7.7 MB - Last synced: 28 days ago - Pushed: 6 months ago - Stars: 1 - Forks: 2

antonkout/phenology_tools

A repository folder regarding phenology extraction scripts utilizing existing packages (i.e. TIMESAT, CropPhenology) and proposing new methodologies

Language: Jupyter Notebook - Size: 2.96 MB - Last synced: about 1 month ago - Pushed: almost 3 years ago - Stars: 10 - Forks: 5

moienr/CropMapping

CropMapping of Partially Anotated Time Series Satellite Images with 3D Convolutional Neural Networks

Language: Python - Size: 11.9 MB - Last synced: 4 months ago - Pushed: 4 months ago - Stars: 0 - Forks: 0

eco-hydro/TIMESAT.R

R package: Extract Remote Sensing Vegetation Phenology by TIMESAT V3.3 Fortran library (only for windows)

Language: R - Size: 698 KB - Last synced: 4 months ago - Pushed: almost 3 years ago - Stars: 26 - Forks: 10

EOA-team/PhenomEn

Repository for the research project "PhenomEn" (Swiss National Science Foundation) - PhD thesis Lukas Valentin Graf

Size: 37.1 KB - Last synced: about 1 month ago - Pushed: 3 months ago - Stars: 0 - Forks: 0

lewistrotter/PhenoloPy

Python-based extractor of vegetation metrics from satellite-based vegetation time-series imagery.

Language: Jupyter Notebook - Size: 1.44 MB - Last synced: 4 months ago - Pushed: about 3 years ago - Stars: 61 - Forks: 13

usa-npn/rnpn

R client for the National Phenology Network database API

Language: R - Size: 5.67 MB - Last synced: about 12 hours ago - Pushed: 4 months ago - Stars: 18 - Forks: 9

bbarker505/ddrp_v2

A final production version of the DDRP platform that includes cohorts, parallel processing, and improving mapping routines. The objective of the Degree-Day, establishment Risk, and Pest event mapping system (DDRP) is to predict phenology and climate suitability of invasive, biocontrol, and IPM species for the conterminous United States. DDRP is written entirely in the R statistical programming language (R Development Core Team 2019), making it flexible and extensible, and has a simple command-line interface that has already been adapted for online use. The platform can use a variety of gridded weather and climate data types for any historical (post-hoc), real-time, or future (downscaled GCM) time period. Model products include gridded (raster) and graphical outputs of number of completed generations, phenological/pest events, and climate suitability (i.e., establishment risk maps). The platform is described in a peer-reviewed paper in PLoS ONE (https://doi.org/10.1371/journal.pone.0244005).

Language: R - Size: 55.7 MB - Last synced: 4 months ago - Pushed: 6 months ago - Stars: 9 - Forks: 4

rafelafrance/herbarium_phenology 📦

Extract phenological data from digitized herbarium specimens

Language: Jupyter Notebook - Size: 1.47 MB - Last synced: 22 days ago - Pushed: 9 months ago - Stars: 4 - Forks: 0

openalea-incubator/lgrass

A 3D Functionnal Structural Plant Model of perennial grasses morphogenesis and phenology

Language: Python - Size: 25.5 MB - Last synced: about 2 months ago - Pushed: 3 months ago - Stars: 8 - Forks: 9

eco-hydro/phenofit-scripts_deprecated

Previous tests of phenofit package

Language: R - Size: 104 KB - Last synced: 4 months ago - Pushed: almost 3 years ago - Stars: 2 - Forks: 0

keillernogueira/spatio-temporal-phenological-segmentation

Spatio-Temporal Vegetation Segmentation By Using Convolutional Networks

Language: Python - Size: 4.16 MB - Last synced: 4 months ago - Pushed: almost 5 years ago - Stars: 7 - Forks: 7

EOA-team/s2toarup

Sentinel-2 Top-Of-Atmosphere Radiometric Uncertainty Propagator (Graf et al., 2023, IEEE-JSTARS)

Language: Python - Size: 319 MB - Last synced: about 1 month ago - Pushed: 10 months ago - Stars: 7 - Forks: 0

TESTgroup-BNL/PiCam

The PiCam time-lapse camera system. A nRF52840 managed, low power sensor node and Raspberry Pi camera system designed for autonomous operations in remote regions for the collection of vegetation phenology data

Language: HTML - Size: 1.43 GB - Last synced: 4 months ago - Pushed: 9 months ago - Stars: 0 - Forks: 0

Carm1r/fruclimadapt

Evaluation tools for assessing climate adaptation of fruit tree species

Language: R - Size: 672 KB - Last synced: 4 months ago - Pushed: about 1 year ago - Stars: 3 - Forks: 0

marlonecobos/Tick_KSOK

Code repository for the project "RII Track-2 FEC: Marshalling Diverse Big Data Streams to Understand Risk of Tick-Borne Diseases in the Great Plains" supported by NSF EPSCoR (IIA-1920946)

Language: R - Size: 111 KB - Last synced: 2 months ago - Pushed: 3 months ago - Stars: 0 - Forks: 0

PeaPodTechnologies/PeaPod

PeaPod is a cloud-connected automated plant growth environment, designed as both a distributed phenotype research tool, and a precision agriculture food production.

Language: C++ - Size: 245 MB - Last synced: 6 days ago - Pushed: over 1 year ago - Stars: 10 - Forks: 1

ConstantinZohner/Autumn-phenology-Science-2023

R code for Zohner et al. (2023)

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GraceBarbacias/Tree-Phenology-using-R_files

Codes and files used for submission for WiSe 2022 under Professor Eike Lüdeling. chillR package was used to project climate scenarios for chosen locations using temperature datasets from GSOD (Global Surface Summary of the Day) and DWD (Deutscher Wetterdienst)

Language: HTML - Size: 81.5 MB - Last synced: 4 months ago - Pushed: about 1 year ago - Stars: 0 - Forks: 0

derekmichaelwright/AGILE_LDP_Phenology

Understanding photothermal interactions can help expand production range and increase genetic diversity of lentil (Lens culinaris Medik.)

Language: HTML - Size: 2.26 GB - Last synced: 4 months ago - Pushed: 7 months ago - Stars: 2 - Forks: 0

derekmichaelwright/AGILE_LDP_GWAS_Phenology

Focusing the GWAS Lens on days to flower using latent variable phenotypes derived from global multi-environment trials. The Plant Genome. (2022) e20269.

Language: HTML - Size: 1.39 GB - Last synced: 4 months ago - Pushed: 6 months ago - Stars: 0 - Forks: 0

n8srumsey/ISEF-2020-Phenology 📦

Nathan Rumsey's senior year International Science and Engineering Fair (ISEF) Project for the 2020-2021 school year.

Language: Python - Size: 16.4 MB - Last synced: 4 months ago - Pushed: about 3 years ago - Stars: 0 - Forks: 0

eco-hydro/phenologyTP

Phenology Research in Tibet Plateau

Language: R - Size: 2.73 MB - Last synced: 4 months ago - Pushed: over 2 years ago - Stars: 4 - Forks: 0

zmlabe/EarlySpringOnset

Evaluating anomalously early spring onsets in the 21st century

Language: Python - Size: 26.6 MB - Last synced: 4 months ago - Pushed: over 4 years ago - Stars: 3 - Forks: 3

Floydworks/WildflowerFinder_Phenology_Tool

Wildflower bloom model using iNaturalist, NOAA GHCN, and Skyfield

Language: Jupyter Notebook - Size: 42.4 MB - Last synced: 4 months ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0

sagesteppe/Augspurger_Synchrony

A single function to calculate Augspurgers index of synchrony after Primack 1980

Language: R - Size: 15.7 MB - Last synced: 4 months ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0

robertladwig/spinyAnoxia

Scripts, data and outputs to process the data and recreate the figures from Rohwer, Ladwig et al. (2022)

Language: R - Size: 60.5 MB - Last synced: 3 months ago - Pushed: 9 months ago - Stars: 0 - Forks: 0

phenomismatch/sightings-database

This is a database of sightings of birds, moths, and butterfiles in support of the phenology mismatch project.

Language: Python - Size: 9.98 MB - Last synced: 22 days ago - Pushed: almost 2 years ago - Stars: 5 - Forks: 1

alinazeng/Tree_Spotters

This repository is created to facilitate our fellow tree enthusiasts in retrieving data and doing analysis regarding the Tree Spotters project.

Language: R - Size: 42.3 MB - Last synced: 4 months ago - Pushed: almost 2 years ago - Stars: 0 - Forks: 0

ericazaja/Erica_Zaja_diss

Ecological and Environmental Sciences Honours Dissertation work by Erica Zaja, 2021. Supervised by Dr Isla Myers Smith and Team Shrub.

Language: R - Size: 117 MB - Last synced: 4 months ago - Pushed: about 2 years ago - Stars: 0 - Forks: 0

prglaum/Phenology Fork of Valdovinos-Lab/Phenology

Matlab code used in Glaum et al 2021 - "Phenology and flowering overlap drive specialisation in plant–pollinator networks"

Language: MATLAB - Size: 1.24 MB - Last synced: 4 months ago - Pushed: over 2 years ago - Stars: 0 - Forks: 0

jmus2235/MEE_Spatial_Temporal_Sampling_Design

R, Python and JavaScript code for the the National Ecological Observatory Network’s Airborne Observation Platform (AOP) sampling design and publication, "Spanning Scales: The Airborne Spatial and Temporal Sampling Design of the National Ecological Observatory Network"

Language: R - Size: 22.5 KB - Last synced: 4 months ago - Pushed: over 2 years ago - Stars: 1 - Forks: 0

biocodellc/ppo-data-interface Fork of BNHM/reservemapper

Visual global plant phenology

Language: JavaScript - Size: 467 KB - Last synced: about 2 months ago - Pushed: about 2 years ago - Stars: 0 - Forks: 1

johnypark/Phenocam-Tropics

Goals, progress, and issues on phenocam leaf phenology analysis.

Size: 17.6 KB - Last synced: 4 months ago - Pushed: almost 5 years ago - Stars: 2 - Forks: 0

TCKnight8/General_Phenology

A place to store my current phenology tool code.

Size: 31.3 KB - Last synced: 4 months ago - Pushed: over 3 years ago - Stars: 1 - Forks: 0

icaruso21/Insect-Phenology-Forecaster

An interactive R-Shiny based insect phenology forecasting tool built on Leaflet and Plotly sourcing current and historical weather data from gridMET and GHCND.

Language: HTML - Size: 440 MB - Last synced: 4 months ago - Pushed: over 3 years ago - Stars: 0 - Forks: 0

ehesch/invasion-drought-ndvi

Code used in the following manuscript: Esch, E.H., Lipson, D.A. & Cleland, E.E. (2019). Invasion and drought alter phenological sensitivity and synergistically lower ecosystem production. Ecology, 100(10). doi:10.1002/ecy.2802

Language: R - Size: 54.7 KB - Last synced: 4 months ago - Pushed: over 4 years ago - Stars: 0 - Forks: 0

rcwhytock/Bush_Whytock_etal_2020

Bush ER & Whytock RC, Bahaa-el-din L, Bourgeois S, Bunnefeld N, Cardoso AW, Thoussaint Dikangadissi J, Dimbonda P, Dimoto E, Edzang Ndong J, Jeffery KJ, Lehmann D, Makaga L, Momboua B, Momont LRW, Tutin CEG, White LJT, Whittaker A, Abernethy K. 2020. Long-term collapse in fruit availability threatens Central African forest megafauna.

Language: R - Size: 13.9 MB - Last synced: 4 months ago - Pushed: over 3 years ago - Stars: 0 - Forks: 0

rbogle/PhenoCam

Window Console application for automated image capture with a JAI gig-e camera.

Language: C++ - Size: 20.5 KB - Last synced: 3 months ago - Pushed: about 7 years ago - Stars: 1 - Forks: 0

LidongMo/FrostRiskProject

Language: HTML - Size: 11.3 MB - Last synced: 4 months ago - Pushed: about 4 years ago - Stars: 1 - Forks: 1

IndraTeja/OldWomanCreek

Understand and Evaluate Datasets(phenology) for decision support by performing data cleaning, data management and document data manupulation and analysis processes for reproducible work. Using RStudio and R skills to develop descritive statitics and plotting, in turn providing presentable information for decision support for target audience.

Language: HTML - Size: 17 MB - Last synced: 4 months ago - Pushed: over 5 years ago - Stars: 1 - Forks: 2

ReproducibleQM/lampyrid Fork of cbahlai/lampyrid

Code repo for the RQM class lampyrid project, SS16

Language: R - Size: 848 KB - Last synced: 4 months ago - Pushed: over 7 years ago - Stars: 0 - Forks: 2

jsta/twilight

R interface to the USNO Sun or Moon Rise/Set Data :full_moon: :waning_gibbous_moon: :last_quarter_moon: :waning_crescent_moon:

Language: R - Size: 22.5 KB - Last synced: 4 months ago - Pushed: about 7 years ago - Stars: 0 - Forks: 0

frousseu/rNest

A package for backcalculating first egg and fledging dates from nest observations in birds

Language: R - Size: 11.1 MB - Last synced: 4 months ago - Pushed: about 7 years ago - Stars: 0 - Forks: 1