GitHub topics: sgrna-design
crisprVerse/crisprViz
Visualization of CRISPR guide RNAs (gRNAs)
Language: R - Size: 1.02 MB - Last synced at: 14 days ago - Pushed at: about 1 year ago - Stars: 9 - Forks: 1
crisprVerse/crisprDesign
Comprehensive design of CRISPR gRNAs for nucleases and base editors
Language: R - Size: 5.93 MB - Last synced at: 2 days ago - Pushed at: 2 months ago - Stars: 22 - Forks: 6
crisprVerse/crisprBowtie
Bowtie-based alignment of CRISPR gRNA spacer sequences
Language: R - Size: 422 KB - Last synced at: 27 days ago - Pushed at: 7 months ago - Stars: 3 - Forks: 0
crisprVerse/crisprScore
On-Target and Off-Target Scoring Algorithms for CRISPR gRNAs
Language: Python - Size: 80.7 MB - Last synced at: 9 months ago - Pushed at: 10 months ago - Stars: 13 - Forks: 3
crisprVerse/crisprDesignData
Useful human and mouse data for the crisprVerse ecosystem
Language: R - Size: 214 MB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 4 - Forks: 0
lucatorep/sgRNA_design_scripts
Script used to cdesign sgRNA sequences based on desired input parameters comparing different web-based tools
Size: 1.32 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0
etemadism/MutCrisper
MutCrisper: A Toolkit for Optimized gRNA Design in Base Editing Technology
Language: Java - Size: 519 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 0
crisprVerse/crisprBwa
BWA-based alignment of CRISPR gRNA spacer sequences
Language: R - Size: 105 KB - Last synced at: 5 days ago - Pushed at: 7 months ago - Stars: 1 - Forks: 0
MDhewei/GuidePro
A multi-source ensemble predictor for prioritizing sgRNAs in CRISPR/Cas9 protein knockouts
Language: Jupyter Notebook - Size: 62.9 MB - Last synced at: about 2 years ago - Pushed at: over 4 years ago - Stars: 1 - Forks: 0
crisprVerse/crisprScoreData
Pre-trained models for the crisprScore package
Language: R - Size: 5.74 MB - Last synced at: about 1 year ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0