akikuno/DAJIN2

🔬 Genotyping tool for genome-edited samples, utilizing nanopore sequencer target sequencing

Language: Python - Size: 561 MB - Last synced at: 29 days ago - Pushed at: 29 days ago - Stars: 11 - Forks: 0

crisprVerse/crisprDesign

Comprehensive design of CRISPR gRNAs for nucleases and base editors

Language: R - Size: 5.93 MB - Last synced at: 3 days ago - Pushed at: 2 months ago - Stars: 22 - Forks: 6

sigven/oncoEnrichR

Explore the cancer relevance of your gene list

Language: R - Size: 1.9 GB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 49 - Forks: 10

crisprVerse/Tutorials

Tutorials for the crisprVerse

Language: TeX - Size: 5.12 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 10 - Forks: 0

crisprVerse/crisprBowtie

Bowtie-based alignment of CRISPR gRNA spacer sequences

Language: R - Size: 422 KB - Last synced at: 27 days ago - Pushed at: 7 months ago - Stars: 3 - Forks: 0

crisprVerse/crisprBase

Base functions and classes for CRISPR gRNA design

Language: R - Size: 3.25 MB - Last synced at: 14 days ago - Pushed at: 10 months ago - Stars: 5 - Forks: 0

crisprVerse/crisprScore

On-Target and Off-Target Scoring Algorithms for CRISPR gRNAs

Language: Python - Size: 80.7 MB - Last synced at: 9 months ago - Pushed at: 10 months ago - Stars: 13 - Forks: 3

crisprVerse/crisprVerse

Collection of R packages that work in harmony for CRISPR gRNA design

Language: R - Size: 45.9 KB - Last synced at: about 1 year ago - Pushed at: about 2 years ago - Stars: 10 - Forks: 0

crisprVerse/crisprDesignData

Useful human and mouse data for the crisprVerse ecosystem

Language: R - Size: 214 MB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 4 - Forks: 0

milescsmith/Azimuth Fork of jjc2718/Azimuth 📦

Fork of Azimuth (Machine Learning-Based Predictive Modelling of CRISPR/Cas9 guide efficiency), updated to work with Python 3.10+

Language: Python - Size: 6.52 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 2

tdseher/addtag-project

CRISPR/Cas-directed HDR genome editing suite: finds+scores gRNA targets, generates donor DNAs, & produces optimal cPCR primer designs.

Language: Python - Size: 2.67 MB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 7 - Forks: 2

bretonics/CHOMP

Search guide-RNA sequences given a genome or gene sequence

Language: Perl - Size: 200 KB - Last synced at: over 1 year ago - Pushed at: about 8 years ago - Stars: 4 - Forks: 1

eugomin/ARES-GT

CRISPR sgRNAs guide analysis software

Language: Python - Size: 5.18 MB - Last synced at: over 1 year ago - Pushed at: about 4 years ago - Stars: 3 - Forks: 0

crisprVerse/crisprBwa

BWA-based alignment of CRISPR gRNA spacer sequences

Language: R - Size: 105 KB - Last synced at: 6 days ago - Pushed at: 7 months ago - Stars: 1 - Forks: 0

crisprVerse/crisprScoreData

Pre-trained models for the crisprScore package

Language: R - Size: 5.74 MB - Last synced at: about 1 year ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0

WilderLavington/Masters-Thesis-Research-Project

Research associated to CRISPR-Cas. Completed under Dr. Manuel Lladser at CU boulder

Language: Matlab - Size: 1.17 MB - Last synced at: about 2 years ago - Pushed at: over 6 years ago - Stars: 0 - Forks: 0

parthspatel/Senior-Design

CRISPR-Cas9 Excision Therapy Suitability

Language: Python - Size: 483 KB - Last synced at: about 2 years ago - Pushed at: almost 7 years ago - Stars: 0 - Forks: 0

sanjaysingh765/crispr_target_prediction_in_R

Language: R - Size: 2.93 KB - Last synced at: about 2 years ago - Pushed at: about 8 years ago - Stars: 0 - Forks: 0