GitHub topics: spectral-library
HUPO-PSI/mzSpecLib
mzSpecLib: A standard format to exchange/distribute spectral libraries
Language: Python - Size: 44.2 MB - Last synced at: 20 days ago - Pushed at: 20 days ago - Stars: 27 - Forks: 14
l-ramirez-lopez/resemble
resemble is an R package which implements functions dedicated to non-linear modelling of complex spectroscopy data
Language: R - Size: 26.1 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 20 - Forks: 14
hgb-bin-proteomics/MSAnnika_Spectral_Library_exporter
Generate a spectral library for Spectronaut from MS Annika results.
Language: Python - Size: 7.61 MB - Last synced at: 2 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0
aiproteomics/aiproteomics
A package for MSMS spectral library prediction models from the field of (phospho-)proteomics, intended to facilitate the testing and comparison of different neural network architectures and existing models.
Language: Jupyter Notebook - Size: 5.61 MB - Last synced at: about 1 month ago - Pushed at: 4 months ago - Stars: 2 - Forks: 2
BAMeScience/Mistle
Mistle is a fast spectral search engine. It uses a fragment-indexing technique and SIMD intrinsics to match experimental MS2 spectra to large spectral libraries at a high performance.
Language: C++ - Size: 146 MB - Last synced at: 2 months ago - Pushed at: over 1 year ago - Stars: 14 - Forks: 1
Shui-Group/TargetDIA
Generate a DIA hybrid spectral library combining an initial DIA library and a targeted virtual library for DIA data processing.
Language: Python - Size: 87.1 MB - Last synced at: over 1 year ago - Pushed at: almost 4 years ago - Stars: 2 - Forks: 0
chinmayaNK22/Blib2OpenSwath
A Python script to convert the spectral library in BLIB format (.blib) from either Skyline or BiblioSpec to readable library format (OpenSwath or Spectronaut libraries)
Language: Python - Size: 28.7 MB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0
chinmayaNK22/SpecLib_Feature_Extractor
Extracts the features of peptide spectral library for better understanding and its efficient usage in DIA database search
Language: Python - Size: 7.73 MB - Last synced at: about 2 years ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0
chinmayaNK22/DIA-SpecLib_Result_Summarizer
Extract the identified peptides and proteins from spectral library search of DIA proteomic data in Skyline
Language: Python - Size: 35.2 KB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0