alignment-algorithm | Topic | Ecosyste.ms: Repos

Topic: "alignment-algorithm"

kaist-ina/BWA-MEME

BWA-MEME: Faster BWA-MEM2 using learned-index

Language: C++ - Size: 16.8 MB - Last synced at: about 1 year ago - Pushed at: over 1 year ago - Stars: 100 - Forks: 14

google-research/sofima

Scalable Optical Flow-based Image Montaging and Alignment

Language: Jupyter Notebook - Size: 4.73 MB - Last synced at: 11 days ago - Pushed at: 5 months ago - Stars: 78 - Forks: 17

ParBLiSS/PaSGAL

Parallel Sequence to Graph Alignment

Language: C++ - Size: 1.11 MB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 33 - Forks: 3

declare-lab/resta

Restore safety in fine-tuned language models through task arithmetic

Language: Python - Size: 75.6 MB - Last synced at: 3 months ago - Pushed at: over 1 year ago - Stars: 28 - Forks: 2

cviaai/VEINCV-RL

Near-Infrared-to-Visible Vein Imaging via Convolutional Neural Networks and Reinforcement Learning

Language: Jupyter Notebook - Size: 30.1 MB - Last synced at: 5 months ago - Pushed at: almost 2 years ago - Stars: 26 - Forks: 5

levyben/gpu_ecc_alignment

Cuda implementation of the ecc image alignment algorithm

Language: C++ - Size: 23.4 KB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 14 - Forks: 2

mmtechslv/nwunch

Implementation of Needleman-Wunsch algorithm in Python Using Nested Functions.

Language: Python - Size: 1.95 KB - Last synced at: over 2 years ago - Pushed at: almost 7 years ago - Stars: 13 - Forks: 4

Xiefeng69/BDCI2022-Network-Alignment-Competition

2022 CCF大数据与计算智能大赛——带噪音的社交网络对齐 (the competition - Social Network Alignment under Noise Intervention at CCF BDCI 2022) [Baseline]

Language: Python - Size: 394 KB - Last synced at: about 1 year ago - Pushed at: almost 3 years ago - Stars: 8 - Forks: 1

Gagniuc/Simple-sequence-alignment-in-VB6

This highly responsive VB6 application is an implementation of the global sequence alignment algorithm. It allows the modification of the alignment parameters (match, mismatch, gap), and it shows the pairwise alignment as well as the score matrix in real time. The purpose of it is to seeks the optimal alignment between two text sequences.

Language: Visual Basic 6.0 - Size: 4.31 MB - Last synced at: 4 months ago - Pushed at: over 2 years ago - Stars: 6 - Forks: 2

Padraig20/Global-Pair-Wise-Sequence-Alignment

The global pairwise sequence alignment algorithm is a bioinformatics method that aligns two sequences from start to finish to identify the optimal sequence alignment based on predefined scoring parameters. Fun example of Parallelization with OpenMP.

Language: C++ - Size: 31.3 KB - Last synced at: 8 months ago - Pushed at: 8 months ago - Stars: 5 - Forks: 0

phflot/variational_aligner

Toolbox for fast, variational 1D alignment

Language: MATLAB - Size: 6.82 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 3 - Forks: 0

vinothpandian/RUITE

RUITE, a UI layout refiner that allows designers to automatically align and group the given UI layout.

Language: Python - Size: 46.9 KB - Last synced at: 3 months ago - Pushed at: over 1 year ago - Stars: 3 - Forks: 2

xuqiongkai/PILD

Project and Dataset for Personal Information Leakage Detection in Conversations

Language: Python - Size: 3.95 MB - Last synced at: over 2 years ago - Pushed at: over 4 years ago - Stars: 3 - Forks: 5

lucaspalmeira/bioinfo

Guia de programas e ferramentas de bioinformática e química computacional

Size: 16.6 KB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 2 - Forks: 0

csiro-crop-informatics/repset

Reproducible evaluation of short read mappers

Language: Nextflow - Size: 3.37 MB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 2 - Forks: 3

A1c0/smith-waterman-scoring

A Node.JS function to compare two arrays with the smith-waterman Algorithm

Language: JavaScript - Size: 63.5 KB - Last synced at: 6 days ago - Pushed at: over 6 years ago - Stars: 2 - Forks: 1

yaziciz/Cranium-Alignment

Automatic head CT alignment using deep learning-based landmark detection and geometric transformations. Standardizes orientation for robust analysis.

Language: Python - Size: 49.9 MB - Last synced at: 5 days ago - Pushed at: 5 days ago - Stars: 1 - Forks: 0

phflot/variational_aligner_IJ

ImageJ and Fiji Plugin for fast, variational 1D alignment of multichannel linescan data

Language: Java - Size: 1.3 MB - Last synced at: over 2 years ago - Pushed at: about 4 years ago - Stars: 1 - Forks: 0

carlatt/Global-Alignment

Simple php script implementing a naive global alignment for dna sequences.

Language: PHP - Size: 6.84 KB - Last synced at: almost 2 years ago - Pushed at: over 7 years ago - Stars: 1 - Forks: 0

Alepidoptera7/assembly_scaffold_BLAST

Algorithm to parse, assemble and align genomic sequences by use machine learning techniques. The resulting sequences are used to form NCBI-BLAST respects and return sequence homologs.

Language: Python - Size: 8.79 KB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0

typinghare/uml-computing4

Computing IV coursework.

Language: C++ - Size: 72.9 MB - Last synced at: 8 months ago - Pushed at: 8 months ago - Stars: 0 - Forks: 0

DF35/Einscan-MRI-Alignment

Aligns 3D einscan meshes to those produced from MRI scans to enable the functional information from an OPM-MEG experiment to be overlaid onto structural brain imagery obtained via MRI

Language: Python - Size: 15.8 MB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0