tripal/tripal

The Tripal package is a suite of Drupal modules for creating biological (genomic, genetic, breeding) websites. Visit the Tripal homepage at http://tripal.info for documentation, support, and other information. The Drupal project page is at http://drupal.org/project/tripal.

Language: PLpgSQL - Size: 53.1 MB - Last synced at: 2 days ago - Pushed at: 2 days ago - Stars: 70 - Forks: 49

lmb-embrapa/machado

This repository provides users with a framework to store, search and visualize biological data.

Language: PLpgSQL - Size: 12.9 MB - Last synced at: 16 days ago - Pushed at: 16 days ago - Stars: 27 - Forks: 18

tripal/tripal_analysis_expression

Extension module for the Tripal toolset to show differential expression data. This module was made for Drupal 7, Tripal 3, and Chado 1.3.

Language: PHP - Size: 5.06 MB - Last synced at: about 2 months ago - Pushed at: 7 months ago - Stars: 4 - Forks: 11

JazzEd-EdTech/biojava Fork of violethaze74/biojava

:book::microscope::coffee: BioJava is an open-source project dedicated to providing a Java library for processing biological data.

Size: 46.5 MB - Last synced at: about 1 year ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0

JazzEd-EdTech/.git-violethaze74 Fork of violethaze74/lmd-jazzededtech

Language: PHP - Size: 53.9 MB - Last synced at: about 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

ropensci-archive/rflybase 📦

:no_entry: ARCHIVED :no_entry: Interface to 'FlyBase'

Language: R - Size: 36.1 KB - Last synced at: about 1 year ago - Pushed at: about 3 years ago - Stars: 3 - Forks: 1

GMOD/docker-apollo Fork of hdzierz/docker-webapollo2 📦

:whale: Apollo 2.X Docker Image

Language: Shell - Size: 320 KB - Last synced at: about 1 year ago - Pushed at: almost 6 years ago - Stars: 10 - Forks: 12

tripal/tripal_genetic

Extends core Tripal with support focused on genotypic data, genetic markers, sequence variants, etc.

Size: 9.77 KB - Last synced at: about 2 months ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 0

statonlab/docker-containers

Offers 3 different flavors of docker containers that can be built upon to deploy Drupal and Tripal sites.

Language: Dockerfile - Size: 33.2 KB - Last synced at: about 1 year ago - Pushed at: about 6 years ago - Stars: 3 - Forks: 4

galaxy-genome-annotation/dockerized-gmod-deployment

:whale::bar_chart::books: Galaxy + Apollo + Chado + Tripal + JBrowse + JBrowse REST API + PostGraphQL + JBrowse GraphQL Experiment all as a docker-compose.yml

Language: Python - Size: 594 KB - Last synced at: about 1 year ago - Pushed at: over 6 years ago - Stars: 5 - Forks: 9

galaxy-genome-annotation/chado-schema-builder

compiles copies of the Chado database and dumps the SQL for use in other tools.

Language: Python - Size: 42 KB - Last synced at: about 1 year ago - Pushed at: over 2 years ago - Stars: 3 - Forks: 1

UofS-Pulse-Binfo/genotypes_loader

A Drush-based loader for VCF files that follows the genotype storage rules outlined by ND genotypes.

Language: PHP - Size: 339 KB - Last synced at: about 2 years ago - Pushed at: almost 3 years ago - Stars: 1 - Forks: 2

tripal/tripal_elasticsearch

Language: PHP - Size: 16.3 MB - Last synced at: about 2 months ago - Pushed at: about 2 years ago - Stars: 5 - Forks: 8

tripal/chado_search

Mainlab Chado Search: enabling advanced search function for a Tripal/Chado database

Size: 398 KB - Last synced at: about 2 months ago - Pushed at: over 5 years ago - Stars: 2 - Forks: 0

statonlab/tripal_alchemist

entity converter for tripal 3

Language: PHP - Size: 2.29 MB - Last synced at: about 1 year ago - Pushed at: over 6 years ago - Stars: 3 - Forks: 0

COMBAT-TB/combattbmodel

COMBAT-TB model is a Chado inspired graph model for genome annotation.

Language: Python - Size: 38.4 MB - Last synced at: 3 months ago - Pushed at: about 4 years ago - Stars: 2 - Forks: 1

statonlab/tripal_dev_seed

A minified bioinformatics dataset for seeding Tripal sites

Language: Python - Size: 59.8 MB - Last synced at: about 1 year ago - Pushed at: over 6 years ago - Stars: 0 - Forks: 2

tripal/mainlab_chado_loader

Mainlab Chado Loader

Language: PHP - Size: 954 KB - Last synced at: about 2 months ago - Pushed at: almost 7 years ago - Stars: 2 - Forks: 0

EvanCarroll/mumine

Work pertaining to import and analytics of unknown data source (mass spec), example of Chado integration

Language: PLpgSQL - Size: 1.95 KB - Last synced at: about 11 hours ago - Pushed at: over 7 years ago - Stars: 0 - Forks: 0

jcvi-plant-genomics/medicago-tripal

Drupal/Tripal code for the MedicagoGenome.org site (MTGD)

Language: PHP - Size: 16.8 MB - Last synced at: 10 months ago - Pushed at: over 7 years ago - Stars: 0 - Forks: 0