GitHub topics: dge-analysis
TommasoTarchi/autoRNAseq
Automated pipeline for RNAseq data analysis using nextflow and singularity.
Language: Nextflow - Size: 206 KB - Last synced at: 7 months ago - Pushed at: 7 months ago - Stars: 1 - Forks: 0
michalbukowski/rnaseq-pipeline-2
Simple Nextflow RNA-Seq pipeline
Language: Nextflow - Size: 871 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0
noucel/RNAseq-DGE
RNA-seq Differential Gene Expression (DGE) analysis comparing multiple dataset samples involves the comparison of gene expression levels across multiple samples with the possibliity to account for defined conditions, treatments, or groups.
Language: R - Size: 2.59 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0
Pg-Pi3Gey/ms-chikv-deg
main Repository for my Master's Thesis work
Language: R - Size: 10.7 KB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0
michalbukowski/rnaseq-pipeline-1
Simple Snakemake RNA-Seq pipeline
Language: Python - Size: 942 KB - Last synced at: about 2 years ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0
bixBeta/DESeq2-shiny
A shiny application to perform differential gene expression analysis of count data using DESeq2. The app also allows unsupervised exploration of data using PCA and hierarchical clustering.
Language: R - Size: 1.91 MB - Last synced at: about 2 years ago - Pushed at: over 4 years ago - Stars: 2 - Forks: 1
Tenzin-Nyima-1/RiMod-FTD
Scripts for the complete analysis pipeline: 1) generation of the count table; 2) annotation of the count-table and differential gene expression analysis; 3) Weighted Gene Coexpression Network Analysis; and, 4) the functional annotation (hypergeometric test) of the hits.
Language: R - Size: 62.5 KB - Last synced at: about 1 month ago - Pushed at: almost 7 years ago - Stars: 1 - Forks: 0
