Ecosyste.ms: Repos

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GitHub topics: locuszoom

naim-panjwani/LocusFocus

Application of the Simple Sum method for testing co-localization of GWAS with any other SNP-level data (e.g. eQTL data)

Language: JavaScript - Size: 76.7 MB - Last synced: about 4 hours ago - Pushed: about 6 hours ago - Stars: 8 - Forks: 4

swvanderlaan/GWASToolKit

A collection of scripts to run GWAS, regional, gene-oriented, or per-variant analyses.

Language: Shell - Size: 851 KB - Last synced: about 12 hours ago - Pushed: 1 day ago - Stars: 15 - Forks: 7

statgen/locuszoom

A Javascript/d3 embeddable plugin for interactively visualizing statistical genetic data from customizable sources.

Language: JavaScript - Size: 15.5 MB - Last synced: about 1 month ago - Pushed: about 1 year ago - Stars: 148 - Forks: 28

mmkim1210/GeneticsMakie.jl

🧬High-performance genetics- and genomics-related data visualization using Makie.jl

Language: Julia - Size: 30.5 MB - Last synced: 14 days ago - Pushed: 24 days ago - Stars: 73 - Forks: 2

statgen/locuszoom-hosted

A web service to upload and share GWAS results with LocusZoom.js

Language: Python - Size: 3.42 MB - Last synced: about 2 months ago - Pushed: over 1 year ago - Stars: 1 - Forks: 0

abought/zorp

A simple GWAS parser + CLI

Language: Python - Size: 454 KB - Last synced: 22 days ago - Pushed: almost 2 years ago - Stars: 1 - Forks: 0

krassowski/jupyter-locuszoom

LocusZoom in Jupyter notebooks

Language: TypeScript - Size: 482 KB - Last synced: 28 days ago - Pushed: 11 months ago - Stars: 4 - Forks: 1

statgen/localzoom

Make interactive LocusZoom plots from a local GWAS file

Language: Vue - Size: 5.76 MB - Last synced: about 2 months ago - Pushed: about 1 year ago - Stars: 6 - Forks: 4

RayDebashree/GWAStools

A curated list (with links) of useful tools for genome-wide association analysis.

Size: 4.88 KB - Last synced: 8 months ago - Pushed: over 5 years ago - Stars: 7 - Forks: 4

jjsayleraxio/AxioLocusZoom

R ShinyApp HTMLWidget using the locuszoom.js library found at https://statgen.github.io/locuszoom/

Language: JavaScript - Size: 760 KB - Last synced: 8 months ago - Pushed: about 5 years ago - Stars: 2 - Forks: 1

RajLabMSSM/ggLocusZoom 📦

Create LocusZoom-style plots in R.

Language: R - Size: 36.1 MB - Last synced: about 1 year ago - Pushed: about 1 year ago - Stars: 15 - Forks: 4