An open API service providing repository metadata for many open source software ecosystems.

GitHub topics: medical-image-segmentation

wurenkai/SK-VMPlusPlus

[BSPC] The official code for "SK-VM++: Mamba assists skip-connections for medical image segmentation".

Language: Python - Size: 1.95 KB - Last synced at: 7 months ago - Pushed at: 7 months ago - Stars: 0 - Forks: 0

xmindflow/Awesome_Mamba

Computation-Efficient Era: A Comprehensive Survey of State Space Models in Medical Image Analysis

Size: 133 KB - Last synced at: 7 months ago - Pushed at: 7 months ago - Stars: 213 - Forks: 14

Ngoc-LM/MambaFusionSeg

The draft code for MambaFusionSeg

Language: Python - Size: 34.2 KB - Last synced at: 7 months ago - Pushed at: 7 months ago - Stars: 0 - Forks: 0

nikhilroxtomar/Brain-Tumor-Segmentation-using-UNETR-in-TensorFlow

This repository demonstrates the utilization of UNETR for brain tumor segmentation.

Language: Python - Size: 1.25 MB - Last synced at: 5 months ago - Pushed at: over 1 year ago - Stars: 9 - Forks: 8

fatemafaria142/Retinal-Fundus-Classification-using-XAI-and-Segmentation

This research enhances early disease diagnosis by analyzing retinal blood vessels in fundus images using deep learning. It employs eight pre-trained CNN models and Explainable AI techniques.

Language: Jupyter Notebook - Size: 867 KB - Last synced at: 7 months ago - Pushed at: 7 months ago - Stars: 5 - Forks: 2

reshalfahsi/MSGNet

Modified MobileNet-ShuffleNet-GhostNet Network for Lightweight Retinal Vessel Segmentation

Language: Python - Size: 454 KB - Last synced at: about 2 months ago - Pushed at: over 1 year ago - Stars: 3 - Forks: 0

kwanghwi242/A-new-segmentation-model

The official code for "LiteMamba-Bound: A lightweight Mamba-based model with boundary-aware and normalized active contour loss for skin lesion segmentation"

Size: 1000 Bytes - Last synced at: 7 months ago - Pushed at: 7 months ago - Stars: 0 - Forks: 0

rekalantar/MedSegmentAnything_SAM_LungCT

The code to finetune SAM with bounding box prompt for segmentation of the lungs on CT

Language: Jupyter Notebook - Size: 18.6 MB - Last synced at: 5 months ago - Pushed at: over 2 years ago - Stars: 32 - Forks: 7

wurenkai/H-vmunet

[Neurocomputing] The official code for "H-vmunet: High-order Vision Mamba UNet for Medical Image Segmentation".

Language: Python - Size: 67.4 KB - Last synced at: 8 months ago - Pushed at: 8 months ago - Stars: 94 - Forks: 4

Fatemehrshd/Brain-Tumor-Segmenation-using-MRI-Images

Medical Image Segmentation on the LGG Segmentation Dataset using U-Net Architecture

Language: Jupyter Notebook - Size: 1.18 MB - Last synced at: 6 months ago - Pushed at: 10 months ago - Stars: 1 - Forks: 0

ChongQingNoSubway/SelfReg-UNet

Code for the paper "SelfReg-UNet: Self-Regularized UNet for Medical Image Segmentation "

Language: Python - Size: 3.07 MB - Last synced at: 8 months ago - Pushed at: 8 months ago - Stars: 45 - Forks: 6

SyntaxErr0r1/POVa

Project for Computer Vision (POVa) course at VUT FIT

Language: Jupyter Notebook - Size: 114 MB - Last synced at: 8 months ago - Pushed at: 8 months ago - Stars: 0 - Forks: 0

Mahbub2001/Medical-Image-Segmentation-Brats-MRI-Dataset

Language: Jupyter Notebook - Size: 1.93 MB - Last synced at: 5 months ago - Pushed at: 9 months ago - Stars: 1 - Forks: 0

mdciri/3D-augmentation-techniques

Chechink the performance of different augmentation techniques on the BraTS 2020 data.

Language: Python - Size: 19.5 KB - Last synced at: 5 months ago - Pushed at: over 4 years ago - Stars: 23 - Forks: 10

reshalfahsi/SA-UNet

Unofficial PyTorch implementation of SA-UNet

Language: Python - Size: 1.95 KB - Last synced at: 2 months ago - Pushed at: over 2 years ago - Stars: 3 - Forks: 0

lskog7/SegMNet

Repository for SegMNet project. Kidney tumor/cyst segmentator based on DeepLabV3+ (UNet++) and KiTS23 dataset.

Language: Python - Size: 46.8 MB - Last synced at: 8 months ago - Pushed at: 8 months ago - Stars: 3 - Forks: 0

MilleXi/Retinal-vessel-segmentation

:fire:一个基于 UNet 的视网膜血管分割项目,使用 PyTorch 实现并基于 DRIVE 数据集进行训练和测试。项目包括完整的数据处理、模型训练和测试流程,最终生成视网膜图像的分割结果。

Language: Python - Size: 2.93 KB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 0 - Forks: 0

Madhavaprasath23/Awesome-Mamba-Papers-On-Medical-Domain

A Comprehensive Survey of Mamba Architectures for Medical Image Analysis: Classification, Segmentation, Restoration, and Beyond

Size: 3.41 MB - Last synced at: 9 months ago - Pushed at: 11 months ago - Stars: 36 - Forks: 5

whq-xxh/SFADA-GTV-Seg

(TMI-2024) Source-Free Active Domain Adaptation (SFADA) for GTV Segmentation across Multiple Hospitals

Language: Python - Size: 3.61 MB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 30 - Forks: 3

whq-xxh/ADA4MIA

Awesome Active Domain Adaptation for Medical Image Analysis

Size: 43 KB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 68 - Forks: 6

xmindflow/MSA-2Net

[BMVC 2024] Official repository of the paper titled "MSA^2 Net: Multi-scale Adaptive Attention-guided Network for Medical Image Segmentation"

Language: Python - Size: 6.94 MB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 27 - Forks: 2

soroushmirzaei/medical-biological-projects

Medical Biological And Humanities Projects

Language: Jupyter Notebook - Size: 1.95 MB - Last synced at: 2 months ago - Pushed at: about 2 years ago - Stars: 2 - Forks: 0

bhardwaj-rahul-rb/vitexnet

ViTexNet: A Multi-Modal Vision-Text Fusion Network for Chest X-ray Image Segmentation

Size: 82 KB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 4 - Forks: 0

STS-challenge/STS-challenge.github.io

Semi-supervised Teeth Segmentation Challenge

Language: HTML - Size: 17.7 MB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 2 - Forks: 0

YongChen-Exact/TC-CoNet

[Computers in Biology and Medicine - 2023] This is an official PyTorch implementation for Collaborative networks of Transformers and Convolutional neural networks are powerful and versatile learners for accurate 3D medical image segmentation

Language: Python - Size: 344 KB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 7 - Forks: 0

FengheTan9/HySparK

[MICCAI 2024] HySparK: Hybrid Sparse Masking for Large Scale Medical Image Pre-Training

Language: Python - Size: 3.85 MB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 8 - Forks: 0

HealthML/active-segmentation

ActiveSegmentation: A Simulation Framework for Benchmarking Active Learning Strategies for 3D Medical Image Segmentation

Language: Python - Size: 3 MB - Last synced at: 8 months ago - Pushed at: about 3 years ago - Stars: 17 - Forks: 1

pooya-mohammadi/pooya-mohammadi

This is Pooya Mohammadi, Open Source Enthusiast, AI Developer & Researcher

Size: 35.2 KB - Last synced at: 4 months ago - Pushed at: 10 months ago - Stars: 28 - Forks: 0

SadiMohammad/dsprl-deepsnake

This repo holds my thesis work on Breast Ultrasound Image Segmentation. This repository contains the code, datasets, and my full thesis document as a book.

Language: Python - Size: 13.9 MB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 0 - Forks: 0

psweens/3D-CNN

Supervised segmentation of 3-dimensional images using a convolutional neural network.

Language: Python - Size: 64.5 KB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 1 - Forks: 0

Kaiseem/SLAug

[AAAI 2023] Official PyTorch implementation of the paper "SLAug: Rethinking Data Augmentation for Single-source Domain Generalization in Medical Image Segmentation"

Language: Jupyter Notebook - Size: 107 KB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 67 - Forks: 6

kamalkraj/DATA-SCIENCE-BOWL-2018

DATA-SCIENCE-BOWL-2018 Find the nuclei in divergent images to advance medical discovery

Language: Jupyter Notebook - Size: 78.5 MB - Last synced at: 5 months ago - Pushed at: over 7 years ago - Stars: 91 - Forks: 74

IoBT-VISTEC/OCTAve

Implementation for OCTAve: 2D en face Optical Coherence Tomography Angiography Vessel Segmentation in Weakly-Supervised Learning with Locality Augmentation (IEEE Transactions on Biomedical Engineering))

Language: Python - Size: 554 KB - Last synced at: 5 days ago - Pushed at: over 2 years ago - Stars: 12 - Forks: 1

muellerdo/kits19.MIScnn

Kidney Tumor Segmentation Challenge 2019: MIScnn - 3D Residual U-Net

Language: Python - Size: 99.1 MB - Last synced at: 2 months ago - Pushed at: about 4 years ago - Stars: 37 - Forks: 10

TrivenDev/FedSLAG

The implementation of HSFL for MIS.

Language: Python - Size: 227 KB - Last synced at: 11 months ago - Pushed at: 12 months ago - Stars: 0 - Forks: 0

dewenzeng/positional_cl

code for paper Positional Contrastive Learning for Volumetric Medical Image Segmentation

Language: Python - Size: 963 KB - Last synced at: 12 months ago - Pushed at: 12 months ago - Stars: 53 - Forks: 10

numaanfarooq/RetinaVeinSegmentation-U-Net

A deep learning project for accurate retinal vein segmentation using U-Net model. This repository includes detailed steps for data preprocessing, model training, and evaluation on the DRIVE dataset.

Language: Python - Size: 8.17 MB - Last synced at: 12 months ago - Pushed at: 12 months ago - Stars: 0 - Forks: 0

Yazdi9/Kidney_Tissue_Segmentation

Kidney Tumor Segmentation

Language: Jupyter Notebook - Size: 538 MB - Last synced at: about 1 year ago - Pushed at: about 2 years ago - Stars: 1 - Forks: 0

CXH-Research/SMAFormer

[BIBM 2024] SMAFormer: Synergistic Multi-Attention Transformer for Medical Image Segmentation

Language: Python - Size: 37.1 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

techthumb1/Image-Based-Diagnostic-Assistant

AI powered Image-Based application for detecting and predicting disease and abnormalities.

Language: Jupyter Notebook - Size: 313 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 1 - Forks: 0

ablanco1950/BrainTumor_sagittal_t1wce_Yolov10

From dataset https://www.kaggle.com/datasets/davidbroberts/brain-tumor-object-detection-datasets/data?select=sagittal_t1wce_2_class a model is obtained, based on yolov10 to indicate a brain tumor type: sagittal_t1wce

Language: Python - Size: 28.3 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

Weston0793/SCHF

An AI Detector for Pediatric Supracondylar Humerus Fractures

Language: Python - Size: 31.3 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 0

sinagho/MSA-2Net

[BMVC 2024] Official Impelementation of MSA^2 Net: Multi-scale Adaptive Attention-guided Network for Medical Image Segmentation

Language: Python - Size: 6.97 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 0

med-air/GazeMedSeg

[MICCAI'24] Weakly-supervised Medical Image Segmentation with Gaze Annotations

Language: Python - Size: 9.32 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 4 - Forks: 0

ZhenZHAO/AD-MT

[ECCV'24] Alternate Diverse Teaching for Semi-supervised Medical Image Segmentation

Language: Python - Size: 2.59 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 16 - Forks: 0

ablanco1950/Kidney_Stone-Yolov10

From dataset https://www.kaggle.com/datasets/safurahajiheidari/kidney-stone-images/data (from Roboflow) a model is obtained, based on yolov10, with that custom dataset, to indicate Kidney_Stone in x-rays.

Language: Python - Size: 18.2 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

zzzqzhou/RAM-DSIR

[ECCV'22] Generalizable Medical Image Segmentation via Random Amplitude Mixup and Domain-Specific Image Restoration

Language: Python - Size: 447 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 35 - Forks: 3

zzzqzhou/Dual-Normalization

[CVPR‘22] Generalizable Cross-modality Medical Image Segmentation via Style Augmentation and Dual Normalization

Language: Python - Size: 11.2 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 92 - Forks: 12

Jun-Jie-Shi/M2FTrans

[IEEE-JBHI'2023] M2FTrans: Modality-Masked Fusion Transformer for Incomplete Multi-Modality Brain Tumor Segmentation

Language: Python - Size: 118 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 13 - Forks: 2

VinAIResearch/3D-UCaps

3D-UCaps: 3D Capsules Unet for Volumetric Image Segmentation (MICCAI 2021)

Language: Python - Size: 205 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 68 - Forks: 14

kakumarabhishek/StyleSeg

[MICCAI ISIC 2024] Code for "Segmentation Style Discovery: Application to Skin Lesion Images"

Size: 3.91 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

pykao/BraTS2018-tumor-segmentation

We provide DeepMedic and 3D UNet in pytorch for brain tumore segmentation. We also integrate location information with DeepMedic and 3D UNet by adding additional brain parcellation with original MR images.

Language: Python - Size: 136 MB - Last synced at: about 1 year ago - Pushed at: about 5 years ago - Stars: 105 - Forks: 23

UMEssen/SALT

Softmax for Arbitrary Label Trees (SALT) is a framework for training segmentation networks using conditional probabilities to model hierarchical relationships in the data.

Language: Python - Size: 60.4 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 73 - Forks: 4

sotiraslab/AgileFormer

This the repo for the paper tiltled "AgileFormer: Spatially Agile Transformer UNet for Medical Image Segmentation"

Language: Python - Size: 8.51 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 49 - Forks: 7

marqinhos/MedicalLiverSegmentationToolKit

Medical Toolkit for Liver Volume Segmentation

Language: Python - Size: 4.73 MB - Last synced at: 2 days ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 1

reshalfahsi/NanoNet-PyTorch

Unofficial PyTorch implementation of NanoNet

Language: Python - Size: 5.86 KB - Last synced at: 4 months ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 0

jcwang123/DM2TNet

Language: Python - Size: 495 KB - Last synced at: about 1 year ago - Pushed at: over 2 years ago - Stars: 10 - Forks: 3

AxDante/SAAMI

Automatic segment and generate masks for any 3D medical images using SAM model without prompt

Language: Python - Size: 12.5 MB - Last synced at: 9 months ago - Pushed at: over 2 years ago - Stars: 14 - Forks: 3

kalyanksk/lungs_segmentation

Lung segmentation in chest X-ray images using U-Net

Language: Python - Size: 110 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

TheAlphaJas/HiFormer-LITS Fork of amirhossein-kz/HiFormer

Implementation of the LITS dataset on HiFormer architecture

Language: Python - Size: 6.23 MB - Last synced at: 7 months ago - Pushed at: about 1 year ago - Stars: 5 - Forks: 0

uni-medical/STU-Net

The largest pre-trained medical image segmentation model (1.4B parameters) based on the largest public dataset (>100k annotations), up until April 2023.

Language: Python - Size: 43.6 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 236 - Forks: 23

khanhdq109/Lung-Tumor-Segmentation

Segmentation of a small target (cancer) in a large image

Language: Jupyter Notebook - Size: 3.17 MB - Last synced at: 7 days ago - Pushed at: over 2 years ago - Stars: 3 - Forks: 0

saqib727/Medical-Analyst

Vital Image Analytics is an AI-powered application designed to assist healthcare professionals in analyzing medical images for diagnostic purposes.

Language: Python - Size: 334 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

reshalfahsi/GIVTED-Net

The official repository for "GIVTED-Net: GhostNet-Mobile Involution ViT Encoder-Decoder Network for Lightweight Medical Image Segmentation."

Language: Python - Size: 195 KB - Last synced at: 4 months ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 0

AngeLouCN/CaraNet

Context Axial Reverse Attention Network for Small Medical Objects Segmentation

Language: Python - Size: 3.05 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 459 - Forks: 31

uncbiag/iSegFormer

iSegFormer: Interactive Image/Volume Segmentation using Vision Transformers (MICCAI 2022)

Language: Python - Size: 40.4 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 27 - Forks: 3

LLeon360/UNetBiomedicalDiagnosis

Contains a module for functions that build and evaluate a U-Net Model which is a modified auto-encoder image-to-image architecture that includes skip connections from encoder to decoder layers with matching input dimensions to retain features from the encoded image. The model is designed for image segmentation and produces a mask based off x-ray data. The model is used with lung x-rays to segment out lungs, brain scans to segment out brain tumors, and pictures of a room to segment out a human figure. With the lungs dataset, it is able to manage 98% accuracy with a wide range of 3,4,5 encoding block of Conv2D and MaxPooling and BatchNormalization + 1 latent layer without pooling and the mirrored number of decoding layers that do Conv2DTranspose for deconvolution and UpScaling to reverse MaxPooling making 7,9,11 layers with doubling filters/kernels in each encoding block from 16,32,64,80 that double with each block like in a traditional CNN and then half with each decoding block.

Language: Python - Size: 110 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 6 - Forks: 2

xmed-lab/GenericSSL

NeurIPS 2023: Towards Generic Semi-Supervised Framework for Volumetric Medical Image Segmentation

Language: Python - Size: 2.36 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 65 - Forks: 3

lescientifik/open_brats2020

Top 10 brats 2020 Solution

Language: Python - Size: 10.3 MB - Last synced at: about 1 year ago - Pushed at: about 4 years ago - Stars: 162 - Forks: 43

Wu0409/UARC

[Neurocomputing 2024] The implementation code of Uncertainty-aware representation calibration for semi-supervised medical imaging segmentation

Size: 3.91 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

neuro-ml/low-resolution

Code release for the paper B. Shirokikh, A. Shevtsov et al. "Accelerating 3D Medical Image Segmentation by Adaptive Small-Scale Target Localization"

Language: Jupyter Notebook - Size: 100 MB - Last synced at: 2 months ago - Pushed at: almost 4 years ago - Stars: 2 - Forks: 0

Senyh/UCMT

[IJCAI 2023] Co-training with High-Confidence Pseudo Labels for Semi-supervised Medical Image Segmentation

Language: Python - Size: 522 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 27 - Forks: 2

xmed-lab/DHC

MICCAI 2023: DHC: Dual-debiased Heterogeneous Co-training Framework for Class-imbalanced Semi-supervised Medical Image Segmentation

Language: Python - Size: 4.35 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 45 - Forks: 0

fitushar/Automatic_Breast_Region_Extraction_using_python

This Repo will contain Python Implementation of an Automatic approach to Extraction Breast Region from Memogram

Language: Jupyter Notebook - Size: 52 MB - Last synced at: 7 months ago - Pushed at: about 5 years ago - Stars: 3 - Forks: 1

ytl0623/monai_wholeBody_ct_segmentation

monai_wholeBody_ct_segmentation

Language: Jupyter Notebook - Size: 234 MB - Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0

miccaiif/DifABAL

PyTorch implementation of our paper "Rethinking Deep Active Learning for Medical Image Segmentation: A Diffusion and Angle-based Framework"

Language: Python - Size: 931 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

ArGilfea/TRU-IMP

Repository for the Publication of the GUI: TRU-IMP

Language: Python - Size: 3.08 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

DebeshJha/TransRUPNet

TransRUPNet for Improved Out-of-Distribution Generalization in Polyp Segmentation (IEEE EMBC)

Language: Python - Size: 827 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 4 - Forks: 0

DebeshJha/PVTFormer

CT Liver Segmentation Via PVT-based Encoding and Refined Decoding (IEEE ISBI)

Language: Python - Size: 1.38 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 10 - Forks: 2

JohnMasoner/3D-Medical-Image-Segmentation

3D Medical Image Segmentation Pytorch

Language: Python - Size: 109 KB - Last synced at: 6 days ago - Pushed at: about 3 years ago - Stars: 13 - Forks: 2

Jewelry-x/Modular-U-Net

Modular PyTorch U-Net model

Language: Python - Size: 80.1 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 0

LorenzRutkevich/Seize-Disease

My project for the national ai competition in germany 2023

Language: Jupyter Notebook - Size: 1.09 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 3 - Forks: 0

wurenkai/HSH-UNet

[CBM] The official code for "HSH-UNet: Hybrid selective high order interactive U-shaped model for automated skin lesion segmentation".

Language: Python - Size: 44.9 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 4 - Forks: 0

wurenkai/MHorUNet

[BSPC] The official code for "MHorUNet: High-order spatial interaction UNet for skin lesion segmentation".

Language: Python - Size: 2.68 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 7 - Forks: 0

05kashyap/Lung-Tumor-Segmentation-DS

Lung tumor segmentation with the UNet model.

Language: Jupyter Notebook - Size: 3.95 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 0

yhygao/CBIM-Medical-Image-Segmentation

A PyTorch framework for medical image segmentation

Language: Python - Size: 299 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 222 - Forks: 43

Bala93/Multi-task-deep-network

Usage of Multi-task deep learning network for semantic segmentation in medical images

Language: Python - Size: 920 KB - Last synced at: over 1 year ago - Pushed at: about 5 years ago - Stars: 121 - Forks: 34

RazvanDu/DUCK-Net

Using DUCK-Net for polyp image segmentation. ( Nature Scientific Reports 2023 )

Language: Jupyter Notebook - Size: 1.04 MB - Last synced at: over 1 year ago - Pushed at: almost 2 years ago - Stars: 61 - Forks: 18

amirhossein-kz/HiFormer

HiFormer: Hierarchical Multi-scale Representations Using Transformers for Medical Image Segmentation (WACV 2023)

Language: Jupyter Notebook - Size: 6.18 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 106 - Forks: 19

DebeshJha/TransNetR

Official implementation of TransNetR: Transformer-based Residual Network for Polyp Segmentation with Multi-Center Out-of-Distribution Testing (MIDL 2022)

Language: Python - Size: 9.91 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 10 - Forks: 2

PRLAB21/MaxViT-UNet Fork of open-mmlab/mmsegmentation

Official implementation of "MaxViT-UNet: Multi-Axis Attention for Medical Image Segmentation" in MMSegmentation Framework.

Language: Python - Size: 26.4 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 12 - Forks: 2

TimothyZero/MedVision

Medical Image Vision Operators, such as RoIAlign, DCNv1, DCNv2 and NMS for both 2/3D images.

Language: Python - Size: 39.4 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 40 - Forks: 3

siyi-wind/MDViT

[MICCAI 2023] MDViT: Multi-domain Vision Transformer for Small Medical Image Segmentation Datasets (an official implementation)

Language: Python - Size: 6.92 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 22 - Forks: 1

abdel-habib/medical-image-segmentation-and-applications

This repository contains the source code for Medical Image Segmentation and Applications (MISA) course for MAIA masters degree.

Language: Jupyter Notebook - Size: 860 MB - Last synced at: over 1 year ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0

an-eve/FH-PS-AOP-2023-segmentation-challenge

MICCAI Challenge 2023: Pubic Symphysis-Fetal Head Segmentation task solved using the U-Net model from the SMP library, accompanied by an algorithm for Angle of Progression estimation.

Language: Jupyter Notebook - Size: 22.5 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

sathvik2612/Ieee-Summer-Project

Retina vessel segmentation using 6 unet models. BT-unet, R2Unet, Unet, ResUnet, AUnet, RAUnet

Language: Jupyter Notebook - Size: 134 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 3 - Forks: 1

an-eve/ISIC-2016-lesion-segmentation-challenge

ISIC Challenge - Lesion Segmentation task solved using the U-Net model

Language: Jupyter Notebook - Size: 8.13 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

DLWK/GSAL

[PR2023] The Code of "GSAL: Geometric Structure Adversarial Learning for Robust Medical Image Segmentation"

Language: Python - Size: 2.16 MB - Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 5 - Forks: 2

KCL-BMEIS/VS_Seg

Automatic Segmentation of Vestibular Schwannoma with MONAI (PyTorch)

Language: Python - Size: 17 MB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 38 - Forks: 8

Umang1103/Cervical-Spine-Fracture-Detection

CNN based cervical spine fracture detection for vertebrae CT scan images

Language: Jupyter Notebook - Size: 3.53 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 1

Related Keywords
medical-image-segmentation 310 deep-learning 95 pytorch 72 segmentation 69 medical-imaging 66 medical-image-processing 50 medical-image-analysis 45 unet 41 image-segmentation 33 computer-vision 25 semantic-segmentation 24 transformer 21 python 21 tensorflow 19 unet-image-segmentation 19 polyp-segmentation 18 semi-supervised-learning 17 cnn 17 u-net 17 deep-neural-networks 15 convolutional-neural-networks 15 transformers 14 machine-learning 13 segmentation-models 12 attention-mechanism 10 keras 9 unet-segmentation 9 neural-network 8 keras-tensorflow 8 vision-transformer 8 mri 8 domain-adaptation 8 retinal-vessel-segmentation 8 colonoscopy 8 unet-pytorch 7 medical 7 segment-anything 7 self-supervised-learning 7 medical-images 7 sam 6 monai 6 mri-segmentation 6 lesion-segmentation 6 3d-unet 6 cardiac-segmentation 6 brain-tumor-segmentation 6 brats 6 skin-lesion-segmentation 5 medical-image-registration 5 knowledge-distillation 5 pytorch-lightning 5 medical-application 5 3d-convolutional-network 5 image-processing 5 synapse 5 active-learning 5 lung-segmentation 5 swin-transformer 5 pytorch-implementation 5 segment-anything-model 5 contrastive-learning 5 mamba 4 tumor-segmentation 4 domain-generalization 4 artificial-intelligence 4 ai 4 miccai 4 weakly-supervised-segmentation 4 dicom 4 consistency-regularization 4 unsupervised-domain-adaptation 4 echocardiography 4 medical-image-computing 4 image-classification 4 awesome-list 4 dataset 4 neural-networks 4 semi-supervised-segmentation 4 brats-challenge 4 benchmark 3 co-training 3 breast-cancer 3 diffusion-models 3 yolo 3 tensorflow2 3 style-transfer 3 object-detection 3 weakly-supervised-learning 3 unet-model 3 biomedical-image-processing 3 unet-tensorflow 3 masked-image-modeling 3 mixup 3 data-science-bowl-2018 3 chronic-wounds 3 reverse-attention 3 foundation-models 3 data-science 3 mamba-state-space-models 3 3d-segmentation 3