iOLIGO/oligo

oligo format tools

Language: Jupyter Notebook - Size: 256 KB - Last synced: about 22 hours ago - Pushed: about 22 hours ago - Stars: 0 - Forks: 0

ggirelli/iFISH-probe-design 📦

iFISH Probe Design: a Python3 package to build iFISH probes.

Language: Python - Size: 9.88 MB - Last synced: 16 days ago - Pushed: about 2 years ago - Stars: 8 - Forks: 5

ggirelli/oligo-melting

Software to estimate oligonucleotide duplexes melting temperature. Includes state-of-the-art monovalent (e.g., Na+) and bivalent (Mg2+) ion correction, formamide (or general denaturant) correction, and melting curve estimation.

Language: Python - Size: 180 KB - Last synced: 28 days ago - Pushed: over 1 year ago - Stars: 10 - Forks: 3

nkvamaks/oligoshell_calc

Oligonucleotide Calculator

Language: JavaScript - Size: 2.53 MB - Last synced: 3 months ago - Pushed: 3 months ago - Stars: 0 - Forks: 0

sfilges/OligoAnalysis

Documents and scripts for analysis of oligonucleotide synthesis errors.

Language: R - Size: 642 MB - Last synced: 3 months ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0

EricLarG4/OligoR

Software suite for oligonucleotide native MS data treatment

Language: R - Size: 247 MB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 2 - Forks: 1

scbirlab/ogilo

⛓️ Automating construction of oligo library sequences for oligo array synthesis.

Language: Python - Size: 40 KB - Last synced: 18 days ago - Pushed: 11 months ago - Stars: 0 - Forks: 0

j-andrews7/ASOspotter

A simplistic Shiny app for observing mutation data.

Language: R - Size: 3.07 MB - Last synced: 7 days ago - Pushed: 6 months ago - Stars: 0 - Forks: 0

fallerlab/Ribo-ODDR

Ribo-seq focused Oligo Design pipeline for experiment-specific Depletion of Ribosomal RNAs

Language: Python - Size: 4.78 MB - Last synced: 7 months ago - Pushed: over 1 year ago - Stars: 6 - Forks: 0

napoleontsai/RNADigestCID

A tool for RNA mass spectrometry

Language: R - Size: 171 KB - Last synced: 7 months ago - Pushed: almost 3 years ago - Stars: 0 - Forks: 0

Technoculture/openoligo-firmware

An open-source platform for managing DNA synthesis processes.

Language: Python - Size: 595 KB - Last synced: 8 days ago - Pushed: 4 months ago - Stars: 1 - Forks: 1

Paradoxdruid/fealden

Tool for generating optimized nucleic acid biosensor sequences

Language: Python - Size: 169 KB - Last synced: about 1 month ago - Pushed: 12 months ago - Stars: 2 - Forks: 0

ggirelli/ifpd2 📦

ifpd2: a Python3.7+ package to build iFISH probes

Language: Python - Size: 396 KB - Last synced: 8 days ago - Pushed: about 2 years ago - Stars: 2 - Forks: 1

ggirelli/kmermaid 📦

K-Mer management tools

Language: Python - Size: 254 KB - Last synced: about 1 month ago - Pushed: over 2 years ago - Stars: 0 - Forks: 0

ggirelli/iFISH4U 📦

Custom routes, pages and files for iFISH4U website.

Language: Smarty - Size: 5.28 MB - Last synced: about 1 year ago - Pushed: almost 2 years ago - Stars: 0 - Forks: 0

palfalvi/primeR

Language: HTML - Size: 68 MB - Last synced: about 1 year ago - Pushed: about 5 years ago - Stars: 2 - Forks: 0

decal/oligdna

:biohazard: Convert Oligonucleotides to Literal DNA Strand Sequences

Language: HTML - Size: 3.91 KB - Last synced: 11 months ago - Pushed: over 5 years ago - Stars: 0 - Forks: 0