gauravcodepro/pacbio-nanopore-repeat-coverage

a long read repeat coverage calculator,given an long read file before assembly either direct from the sequencing runs or after the cleaning, it calculates the total amount of the repeat stretches present in the sequencing reads and you can plot them before assembly

Language: Python - Size: 18.6 KB - Last synced: 28 days ago - Pushed: about 1 month ago - Stars: 1 - Forks: 0

gozdekb/gozdekb

Basic packages for amplicon-based sequencing analysis.

Size: 8.79 KB - Last synced: 3 months ago - Pushed: 3 months ago - Stars: 0 - Forks: 0

Aryan092/Advanced-Data-Analyisis-Project

Analyze Whole Genome Bi-Sulfite Sequencing for Grape evolution in response to grafting

Size: 54.8 MB - Last synced: 4 months ago - Pushed: over 3 years ago - Stars: 1 - Forks: 0

smithlabcode/preseq

Software for predicting library complexity and genome coverage in high-throughput sequencing.

Language: C++ - Size: 11.8 MB - Last synced: 4 months ago - Pushed: over 1 year ago - Stars: 67 - Forks: 15

raymondkiu/fastq-info

Calculate fastq reads and sequencing coverage

Language: Shell - Size: 58.6 KB - Last synced: 8 months ago - Pushed: over 3 years ago - Stars: 12 - Forks: 2

sigven/cacao

Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer

Language: R - Size: 20.4 MB - Last synced: 9 months ago - Pushed: over 3 years ago - Stars: 21 - Forks: 4

broadinstitute/tangent

Language: Shell - Size: 43.8 MB - Last synced: about 1 year ago - Pushed: about 5 years ago - Stars: 5 - Forks: 3

Johannes-Zi/CLCR

Detection and correction of sequencing errors in protein coding regions of whole genome draft sequences

Language: Python - Size: 2.39 MB - Last synced: about 1 month ago - Pushed: over 1 year ago - Stars: 3 - Forks: 0

smithlabcode/preseqR

An R package for estimating library complexity

Language: R - Size: 1.55 MB - Last synced: 7 months ago - Pushed: over 1 year ago - Stars: 10 - Forks: 3